Thioalkalivibrio nitratireducens: TVNIR_3428
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Entry
TVNIR_3428 CDS
T02408
Symbol
radA_[H]
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3428 (radA_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TVNIR_3428 (radA_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
ChlI
AAA_16
Lon_C
DnaB_C
RecA
DUF7125
Rad51
AAA_24
AAA_14
AAA
SLFN-g3_helicase
AAA_5
ABC_tran
NTPase_1
MCM
HepII_C
AAA_29
ELP6
PAXNEB
nSTAND3
AAA_30
NACHT
CobU
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AGA35064
UniProt:
L0DZP2
LinkDB
All DBs
Position
3542624..3543976
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AA seq
450 aa
AA seq
DB search
MAKPKLRYVCRECGSISPKWSGQCGDCGAWNSMEELAPSAAAQSTRGGGYAGEAGRITRL
GDVESREVPRIPTGLSELDRSLGGGLVHGSVVLIGGDPGIGKSTLLLQVLALLPPDQSLY
VTGEESAQQVSLRAHRLGLDVAGLRLLTETQVENVIATSERERPRVLVIDSIQTLYSAGL
QSAPGSVSQVRESAAALVRLAKQRGVTVILVGHVTKDGQIAGPRVLEHMVDTVLYFEGDP
GGRYRMLRAVKNRFGAVNELGVFAMQEDGLTPVANPSAIFLSRHSRPVPGSVVMVTREGT
RPLLVEVQALVAETHAPQPRRVTLGLEQNRLIMLLAVLGRHGGITLFDQDVFVNVVGGVR
VSETAADLPMLVAALSSLRDRPLGMDLACFGEIGLSGEVRPVPNGEERLAEAVKHGMTRA
IIPAGNRIRRRLPGIEIQPVEHLTDALDLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccgaagttgcggtacgtctgtcgggaatgcggcagcatcagcccgaagtgg
tccgggcagtgcggcgactgcggggcctggaacagcatggaggagttggccccgagcgcc
gccgcgcagagcacacgcggcgggggctatgccggcgaggctggccggatcacccgcctc
ggagacgtcgagagccgggaagtgccacgcatccccaccggcctgtcggaactcgaccgc
agcctcggcggcggactggtccacggctcggtggtgctgatcggcggcgacccgggcatc
ggcaagtccaccctgctgctgcaggtgctggcgctgctgccaccggaccagagcctgtat
gtgaccggagaggagtcggcgcagcaggtcagcctgcgcgcacaccggctcggtctggat
gtagccggcctgcgcctgctgaccgagacgcaggtggaaaacgtgattgcgaccagcgag
cgtgaacggccgcgggtactggtgatcgattcgatccagacgctgtacagcgccgggctg
cagtcggcgccgggatcggtctcgcaggtgcgcgaaagtgccgcggccctggtgcggctg
gcgaagcagcgcggagtgaccgtgatcctggtcggccacgtgaccaaggacggccagatc
gcgggcccgcgggtgctcgaacacatggtcgacacggtgctgtacttcgagggcgatccc
ggcgggcggtaccgcatgctgcgggcggtaaagaaccgcttcggcgcggtcaatgaactc
ggcgtgtttgcgatgcaggaagatggcctgacgccggtcgcgaacccgtcggcaatcttc
ctttcccggcacagccggccggtacccggcagcgtggtgatggtgacccgcgagggcacc
cggccgctgctggtcgaggtgcaggcgctggtggccgagacccatgcccctcagccgcgg
cgggtcacgctcggtctggagcagaaccggctgatcatgctgctcgcggtgctgggacgg
cacggcggcatcacattgttcgatcaagacgtattcgtgaacgtcgtcggcggggtgcgc
gtatccgaaaccgccgccgacctgccgatgctggtcgcggcactgtcgtcgctgcgcgac
cgcccgctgggcatggacctggcctgcttcggggagatcgggttatcgggcgaggtgcgc
ccggtcccgaacggcgaggaacgcctggccgaagccgtgaagcatgggatgacgcgcgcg
atcattcccgccggcaaccgcatccgccggcgcctgcccggcatcgagatccagccggtc
gaacacctcaccgacgccctcgacctcgtctga
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