Thioalkalivibrio nitratireducens: TVNIR_3553
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Entry
TVNIR_3553 CDS
T02408
Symbol
priA_[H]
Name
(GenBank) Helicase PriA essential for oriC/DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TVNIR_3553 (priA_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3553 (priA_[H])
Enzymes [BR:
tni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TVNIR_3553 (priA_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TVNIR_3553 (priA_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
nSTAND_NTPase5
Zeta_toxin
zf-CHY
TackOD1
AAA_16
Zn_ribbon_CLPX_N
AAA_19
UPF0547
Motif
Other DBs
NCBI-ProteinID:
AGA35183
UniProt:
L0E1K9
LinkDB
All DBs
Position
3682184..3684379
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AA seq
731 aa
AA seq
DB search
MPQETFVRVAIDRPLDRLFDYRCPPELRPLPGQRVRLPFGRTDTVGVVMESVETPAVASS
RIRALGALIDPDPVLTAPLLELLRFTARYYHHPLGEVVLNALPPALRRGAPLPDPRVPES
LWRADIDADQPRRIGPRQQATIDALREARAPLTRDALNDLTGLGLRRAELERMAARGLLA
AEPAASGTPEPSEDGGPAVPLTPEQRDAIAEIIGQTGRPTVFLLDGVTGSGKTEVYLEAA
ARSLARGGQVLILIPEIALTPQLIQRVSRRFPGQVAALHSGLAAGERLRAWDDARRGERP
LLLGTRSALFTPLPRLGLIIVDEEHDPAYKQQDGLHYHARDLAILRGHIESLPVVLGSAT
PTLETLEKARSGRYRHLRLGTRPDGSRPPAVNCLDTRVHATDEGLSAPMLDAMRRTLAQG
RQCFILLNRRGFARVLTCDHCGWVADCPRCDAHLTVHASIRRSICHLCGFTQPLTESCPQ
CGQPLRHLGVGTQRLERALSRHFPDTPLMRLDRDSIRRRGALERSLETIRAMDAGIVVGT
QILAKGHDFPRVGLVGIIDVDQGLFSSDLRAAEQTLQLVLQAAGRAGRAGDPGEVLIQTG
HPEHPLMRALRAGDYAAMVGPLLDERRHSGMPPYGYLALVRVDGPGPEATQRQAEEMARE
LRRHAREVRVLGPAPAPRHRVNRRYREQILLASSRRATLHHTLGETRRHWEEHPPPRNLR
ISIDVDPITLA
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggaaaccttcgtccgggtcgcgatcgaccgcccactcgaccggctgttcgac
taccgctgcccgccggagcttcggccgctcccgggacagcgggtccgcctgccgttcggg
cgcaccgacacggtcggggtggtgatggaatcggtggagaccccggcagtcgcgtcctcc
cggatccgggccctaggcgccctgatcgatccggatcccgtgctgaccgcaccgttgctg
gaactgctgcgcttcaccgcccgctactatcaccatccgctgggcgaggtcgtgctcaac
gcgctgccgccggcactccggcggggcgcccccctgccggatccgcgcgttcccgaatct
ctttggcgtgccgatatcgacgcagaccagccccggcgcatcgggccgcgccagcaggcg
acgatcgacgcgctgcgcgaggcccgggctccgctgacccgcgacgcgctgaacgatctc
accgggctgggattgcgccgggcggagctggagcgcatggccgctcgcgggcttcttgcg
gcggagcccgcagcctcgggaacccccgaaccctcggaggacggcggcccggcagtgccc
ttgaccccggagcagcgcgatgccatcgccgagatcattggccagacgggccggcccacg
gtatttctgctcgacggtgtgaccggcagtggcaagaccgaggtgtacctggaagccgcc
gcccggagcctcgcccggggcggacaggtgctgatcctgattcccgagatcgcgttgacc
ccgcagctgatccagcgtgtcagccggcgctttccgggacaggtcgcggcgctgcattcg
gggctggccgcgggggaacgcctgcgcgcctgggacgatgcacggcgcggcgaacgcccc
ctgctgctcggtacccgatcggcgctgttcaccccgctcccgcggctgggactgatcatc
gtcgacgaggagcacgaccccgcctacaagcaacaggacggcctgcactaccatgcccgc
gatctcgcaatcctgcgtgggcatatcgagtcgctgccggtggtgctggggtcggccacg
ccgacgctggagacgctggagaaggctcgcagcggacgctaccgccacctgcgcctcggc
acgcgtcccgacggctcccggccgcccgcggtgaattgcctggacacccgtgtccacgcg
accgacgaaggtctcagcgccccgatgctcgacgccatgcgcaggacgctggcacagggg
cgccagtgcttcatcctgctgaaccggcggggctttgcccgggtactcacctgcgaccac
tgcggctgggtggccgattgcccgcgctgcgacgcgcatctcaccgtccatgcctcgatc
cggcgttcgatctgccacctctgcgggttcacccagccgctgaccgaatcctgcccgcaa
tgcgggcagccgctgcgccacctcggggtgggaacccagcgcctggaacgggctctgtcc
cggcattttccggacacgccgctgatgcgcctggaccgcgacagcatccggcgccggggc
gccctcgaacggagcctggaaacgatccgcgcgatggacgcggggatcgtcgtcggcacc
cagatcctcgcgaagggccacgactttccgagggtcgggctggtgggcatcatcgacgtc
gaccagggcctgttcagttcggatctgcgcgccgccgagcagaccctgcaactcgtgcta
caggccgccggccgcgcgggccgtgccggagatcccggcgaggtcttgatccagaccggg
cacccggaacacccgctgatgcgcgcgctgcgcgccggggactatgcggccatggtcgga
ccgctgctcgacgagaggcgccattcgggaatgccgccgtacggatacctggcgctggtc
cgggtcgacggccccggcccagaggcaacccagcgccaggccgaggagatggcgcgcgag
ctgcgccgccacgcgcgcgaggtgcgcgttctgggtccggcgcccgcgccacggcaccgg
gtgaatcgccggtaccgcgagcagattctgctggcgagtagccgccgggccaccttgcat
cacacccttggcgagacacggcgccactgggaagagcacccgcccccgcgcaacctgcgc
atcagcatcgacgtcgacccgatcaccctcgcctga
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