Thioalkalivibrio nitratireducens: TVNIR_3816
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Entry
TVNIR_3816 CDS
T02408
Symbol
gyrB_[H]
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tni03032
]
TVNIR_3816 (gyrB_[H])
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3816 (gyrB_[H])
Enzymes [BR:
tni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TVNIR_3816 (gyrB_[H])
DNA replication proteins [BR:
tni03032
]
Prokaryotic type
DNA Topoisomerases
TVNIR_3816 (gyrB_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TVNIR_3816 (gyrB_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
AGA35440
UniProt:
L0E2L2
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All DBs
Position
3955528..3957960
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AA seq
810 aa
AA seq
DB search
MSTPDPNLSPSVYDSTQIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEAL
AGYCTAIDVTIHEDNAISVTDNGRGIPVDLHPEEGKSAAEVIMTVLHAGGKFDNNSYKVS
GGLHGVGVSVVNALSEELRLEIHRSGRVYQQTYRHGVPDAALAQAGETDRTGTTIWFRPS
AQTFTNIEFHYEILAKRLRELSFLNSGVRIRLKDQRDNREDVFRFEGGIRAFVAHLNQKK
TALHPTVIYSDQTRDHYTVEVALQWNDSYQENLFCYTNNIPQRDGGTHLAGFRAALTRTI
NQYLEREGLLKRAKISTAGDDMREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPLVDNVV
SDVLSDFLLENPSEAKVITGKVIDAARAREAARRAREVTRRKGALDIAGLPGKLADCQEK
DPARSELFLVEGDSAGGSAKQGRDRHFQAILPLKGKILNVERARFDRMLSSAEVGTLITA
LGCGIGKEDYNPDRLRYHRIIIMTDADVDGSHIRTLLLTFFFRQMRELIELGHVYIAQPP
LYKIKRGKREQYVRDEAEMQEILLSLALDGARLHVSPDAPPVAPEAFERLVQGYQKVDRA
LERLGRLYDPRILRAMFDADPMPEPRTITNSEVQQWFAALLAQLSSERAGATRYSLGSLS
ELDGVAQLSLDRIEHGAPFSQYITDEILDSRDFRALLDMSETLHGLLEDGAYIQRGERKH
VIESFPDAMTWLLNEARRGLSVQRYKGLGEMNPDQLWETTMNPESRRLLQVRIEDAIRAD
EVFTTLMGDQVEPRREFIEARALSAENVDV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccagatccgaatctctccccaagcgtctacgactccacccagatcaaggtc
ctgaagggactcgatgcggtccgcaagcgaccgggcatgtacatcggtgataccgatgat
ggcaccggtttgcaccacatggtcttcgaggtcgtcgacaattcgatcgacgaggcgctc
gccggctactgcaccgcaatcgatgtcaccattcacgaggacaacgcgatcagcgtgact
gacaacggtcgtgggatcccggtcgacctgcacccggaagagggcaagtccgccgccgag
gtgatcatgaccgtcctgcacgccggtggtaagttcgacaacaactcctacaaggtttcc
ggcggcctacacggtgtcggtgtctcggtggtcaacgcgttgtcggaggagctgcgcctg
gaaatccaccgcagcgggcgtgtctaccagcagacctaccgtcatggcgttcccgatgct
gcgctcgcgcaggccggtgaaaccgaccgaaccggcacgacgatctggtttcgtcccagc
gcccagaccttcaccaatatcgagtttcattacgaaatcctggcgaagcgactgcgcgag
ctgtcctttctcaactcgggcgtgcgcatccgcctgaaggatcaacgcgataaccgcgag
gatgtcttccgcttcgaggggggaatccgcgccttcgtcgcacacctgaaccagaagaaa
accgcgcttcatcccacggtgatctattccgaccagactcgcgaccactacaccgtggaa
gtcgcgctgcagtggaacgactcctaccaggaaaacctcttctgctacaccaacaacatt
ccccagcgtgatggcggtacccatctggccggtttccgggcggcgctgacgcgtacgatc
aaccagtaccttgagcgcgaggggctgctgaaacgcgcgaagatctcgaccgccggcgat
gacatgcgcgagggcctcaccgctgtattgtcggtaaaagtgcccgacccgaagttctcc
tcgcagacgaaggacaagttggtctcgtccgaggtgaagccgctggtcgacaacgtcgtc
agcgacgtgctgagcgatttcctgctcgagaacccgtccgaagccaaggtgattactggc
aaggtcatcgatgccgcccgcgcaagggaagccgctcgccgtgcgcgcgaggtcacccgc
cgcaaaggggcactcgatatcgccggtctgccgggaaagcttgcggactgccaggaaaag
gatccggcgcgatccgagctgtttctggtcgagggcgactctgcgggcggttccgcgaag
cagggtcgggatcgacattttcaggcgatcctgccgctgaagggcaagatcctgaacgtc
gagcgtgcccggttcgaccggatgctgagctcggccgaagtcggcacgttgatcaccgcc
ctcggctgcggaatcggcaaggaggattacaatcccgaccggctgcgctatcaccgcatc
atcatcatgaccgatgccgacgtcgacggctcgcacatccgcaccctgctgttgaccttc
ttcttccggcagatgcgcgagctgatcgagctgggacacgtctacattgcgcagccgcct
ctgtacaagatcaagcgtggcaagcgtgaacagtacgtgcgcgacgaggccgagatgcag
gaaatcctgctgtcgcttgcgctcgacggtgcacgcctgcacgtttcgcccgatgccccg
ccggtcgcgcccgaggctttcgagcggctcgtccagggctatcagaaggtcgaccgcgca
ctggagcgcctgggccgtctgtacgatcccaggattctgcgcgcgatgttcgacgccgat
ccgatgccggagccccggacgatcaccaattccgaggtccaacagtggttcgcagcactg
cttgctcaactgtccagcgagcgcgcgggcgcaacgcgatacagccttggttccctgagc
gaactcgacggggttgcccagctgagcctggaccgcatcgaacacggcgcgccgttttcg
caatacattaccgacgagatcctcgattcacgcgacttccgtgcgctgctggacatgagc
gagacgctgcacggcctgctcgaggacggggcctacatccagcgcggcgaacgcaaacac
gtgatcgaatcgttccccgatgcgatgacctggttgctcaacgaggcgcgccgcggcctg
agtgtgcagcgctacaaggggctcggggagatgaaccccgatcagctctgggagaccacg
atgaaccccgagtcccgccgcctgctgcaggttcgcatcgaggatgcgatccgtgccgac
gaggtcttcaccacgctgatgggcgaccaagtcgaaccgcgtcgggaattcatcgaagcg
cgcgccctcagcgcggagaatgtcgacgtctga
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