Trichoplusia ni (cabbage looper): 113491870
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Entry
113491870 CDS
T05757
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
tnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113491870
03460 Fanconi anemia pathway
113491870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnl03032
]
113491870
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113491870
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
113491870
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Topoisomerases
113491870
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
113491870
FA (Fanconi anemia) pathway
113491870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
HVO_2753_ZBP
zf-LITAF-like
Zn_ribbon_recom
Zn_ribbon_InsA
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
113491870
NCBI-ProteinID:
XP_026724860
UniProt:
A0A7E5V9A9
LinkDB
All DBs
Position
3:complement(10564480..10571978)
Genome browser
AA seq
1050 aa
AA seq
DB search
MPFLLTNLPNLIRKLETKNIQSFLRTLSSNIETMKYLNVAEKNDAAKNIAQHLSRGTSRR
REGLSQYNKIYEFESEVMGQKCQMVMTSVSGHLLSLEFVGAYKSWQSCSPLALFDAPVFK
FCPENYEKIKKTLEREIRSCQGLIIWTDCDREGENIGFEIIDVCKAVKNNLRVFRAKFSE
ITSVSVWRALQNLEQPNKNISDAVDVRQELDLRIGAAFTRFQTLRLQKVFPTKLAQSLVS
YGSCQFPTLGFVVERYRAVENFVPEPFWKIRVNHTMNDLSVDFAWERIRLFDRDACQVLH
DVCLESPQAKVSEVKTKPKSKWRPLPLDTVELEKLASRKLKINAKETMRLAEKLYTQGFI
SYPRTETNEYPKEMNLGQLVGHQTADPNWGTFAQNILDSGGPTPRQGNKSDKAHPPIHPT
KYTNNLNGNEQRLYEFIVRSFLACCSKDAQGQETTVSIEVAGEKFNASGLMITARNYLEV
YPYDKWSSKEIHVYQNGQTFNPTSIDMLDGQTSPPNLLTEADLIALMEKHGIGTDATHAE
HIETIKNRSYVALANAIHFVPGLLGMGLVEGYDAMGLTISKPHLRAQLEADLKAISEGRR
QPQQVLAEQIAKYKEVYQTVALEANKIDAALGERFSEQPNEYVPSAETMPVDMPAAFKCP
KCGSDMVVRHKKNNADELYISCMSYPSCKNAVWLPSLVKSIQVLPGTCSVCGPNYKMLKF
EWRNNQISHLYPSPYTGCIGGCDTTFLEMLRINLSSVRQVAERTQNTNITATTVNRSQNS
RPSSNSNSPSTITPPIPVVPSIPSAAPRPNIAQPRQFVPPPVANRAPNPTNNQPRMPLPR
SENGDDNNVLCGCNKPAIVLTVRKQTPNFGKQFYKCQVGKDNGGCDFFLWAPESTDTVQN
PYDTPPSSSWGGSDQTSSNTTRGWGGRSRDSNAGGDDDVKCDCGLPCKKLTVQKEGPNKG
RTFYGCVKDLGSRCNFFQWGDSEAAPAVDWGNSSSNSRGRGRGGGRQPRGERPPRAERQP
RGERQPRGGSRLCSLCRQPGHTRGRCPNTQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgccttttctattaaccaatttacctaaccttatcagaaaacttgaaacgaagaacata
caaagtttcttacgaacattaagcagtaacattgagactatgaagtatttaaatgtggcc
gaaaagaatgatgccgctaaaaatatcgcacaacatttgtcgcgaggcacatctagaagg
cgggaaggactctcacagtataataaaatctatgaatttgaaagtgaagtgatgggacag
aaatgccaaatggttatgacttcagtgtctggacacttgctgagcttagagtttgttggg
gcttataagagctggcagtcttgtagcccgctcgctttgtttgatgcacccgtttttaaa
ttctgcccagagaactatgagaaaattaagaaaactttggaaagggaaataaggagttgt
caaggtttgatcatctggacggattgtgacagagaaggagaaaacattggttttgagata
attgatgtttgtaaagcagtaaagaacaatcttagggtattccgagccaaattctctgaa
atcacatctgtgtccgtgtggagggctctgcagaacttggaacaacctaataagaacatt
agtgatgctgttgatgtgaggcaagagttagatttaaggataggtgcagctttcacaaga
tttcaaaccttacgacttcaaaaagtttttcctacaaaactagcacaaagtttagtcagt
tatggttcctgccagtttccgacactaggctttgttgtggagaggtaccgcgccgtcgag
aactttgtgcctgaaccattttggaagataagagttaaccacactatgaatgacttgagt
gttgatttcgcatgggaaaggataagactattcgatcgtgatgcgtgccaggtactgcat
gatgtatgcttagaaagcccccaggcgaaggtttctgaagtgaaaaccaaaccaaagtcg
aaatggagacctctgccattggatacagtggaacttgaaaaactcgcatctaggaagttg
aaaattaacgcaaaggagacgatgcgacttgcagaaaagttatacacgcaggggtttata
agttatccacgtaccgagaccaatgagtaccccaaagagatgaacttaggacaactggtg
gggcaccagacggcagaccccaactgggggacttttgcacagaatattttggacagtggg
gggccgaccccgcggcaagggaacaagagcgacaaggcccatcctcccattcatcctaca
aagtacaccaacaatttaaatggcaatgaacagcggttatacgagtttatagtccgctcg
ttcttggcctgttgttcaaaagacgcccagggtcaagaaactacagtgtctattgaagta
gccggtgagaagttcaacgcaagtggtcttatgataacagcaagaaactatttagaagtg
tatccttacgataagtggtcctcaaaggaaattcacgtttatcagaatgggcaaaccttc
aatccgactagcatagacatgttagacggccaaacttcaccaccgaatcttttaacagaa
gctgatctcatcgctctaatggaaaaacatggaatcggcacagatgcaacacacgcggaa
catatagaaacaataaagaacagatcttacgtggccttagcgaacgcgatacatttcgta
cccggcttgcttggcatgggcctcgtagagggctatgacgcgatgggcctcactatatcc
aaacctcacttgagggcacagctggaggccgacctgaaggccatcagtgagggcaggcgg
caaccgcagcaggtgctagctgaacagatagcaaaatacaaggaggtatatcaaacagta
gctttagaagctaacaagatcgacgctgcgttaggtgaaaggttcagcgagcagccgaac
gagtatgttccgtcagctgagaccatgccagtggacatgcctgcagctttcaaatgtcct
aaatgtgggtcagacatggtggtgagacataaaaagaacaacgccgatgaactctacata
agttgtatgtcataccccagttgcaagaatgctgtctggctgccttctctagtcaagagc
atacaagtgttacctggaacttgttcagtttgtggaccaaactacaaaatgttaaaattt
gaatggcgaaacaatcaaataagtcacctatatccatctccttacactggctgtataggc
gggtgtgacactacgttcttagaaatgcttagaataaacctatccagtgttagacaagta
gctgaaagaactcaaaacacaaacattactgcgacaactgtaaatagatcacaaaatagt
cgcccaagtagtaacagcaacagccctagtactataacacctccgattcctgtggtacct
tcaattccctcagcggctccaaggcccaatatagcacagccaaggcaatttgtacctccg
cctgttgcaaatagagctccgaatccaacgaacaaccagccaaggatgccgttaccaaga
agtgaaaatggcgacgataataacgtactctgtggctgtaacaaaccggctattgtctta
acagtacgaaaacaaacgccgaattttggcaagcaattttacaaatgccaagtgggtaaa
gacaacggtggctgtgacttcttcctatgggcgccggagtctactgacactgtacagaac
ccgtacgacactccgccgtccagttcgtggggaggcagcgaccagaccagcagcaacaca
accaggggctggggaggaaggtcgcgagacagcaatgctggcggggatgatgacgtcaag
tgcgactgcgggctgccttgtaaaaaactaacggtgcagaaagaaggtccaaataaaggt
cgaactttttatggctgtgtaaaggacctcggttcaagatgtaacttcttccaatgggga
gattcggaagcagcaccagcggtagattggggcaacagcagcagcaatagccgtggaagg
ggtcgcggcgggggcaggcaaccccgcggggagcggccgcctcgcgcggagcggcaacct
cgcggggagcggcagccccgcgggggctcgcgtctgtgcagcctgtgccgccagcccgga
cacacgcgcggacgctgccctaacacacaatga
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