Trichoplusia ni (cabbage looper): 113491902
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Entry
113491902 CDS
T05757
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03250
Viral life cycle - HIV-1
tnl04144
Endocytosis
tnl04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113491902
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113491902
04145 Phagocytosis
113491902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113491902
Membrane trafficking [BR:
tnl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
113491902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hrs_helical
VHS
FYVE
DUF4428
ATG30_helical
Motif
Other DBs
NCBI-GeneID:
113491902
NCBI-ProteinID:
XP_026724918
UniProt:
A0A7E5V9G4
LinkDB
All DBs
Position
3:11007888..11023253
Genome browser
AA seq
1051 aa
AA seq
DB search
MFRANNFDKLLDKATSNLRLDPDWPTILQICDLIRQNDCSPKYAVAAVKKKLYSQNPHQA
MFALLTLESIVKNCGSGVHDEVTSKAFCEMLRDLVKTTQHDNLRNKILELIQAWAFAFRN
SPKYRAVQDTVNILKAECYKFPPLKESDAMFSADTAPEWANGEVCHRCRVAFSLMVRRHH
CRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACYDKVSRPPQSSTKLDIVDTSSDYGPT
AATQQKRTGGKTAEELQEEEELQLALALSQSEAEQKEKERKSRAHILPEPTPHHPTVSPT
PSSVSASPEHSTQANSELSRYLDRNYWEQRLSRDNAVAPTAPAPASHASDITEEFPKPSA
TKAQDDDAEDKEIDEFVESLKSQVEIFVNRMKSNSSRGRSIANDTAVQTLFMNITAMHSR
LLRYIQQQDDKRVYLESLQDKVTQIRDSRAALDTLRAEHAARLAAAAEAAERQRQMQMAA
KLQAMRKKKHEYLQYQRQLALQRVQEQEREMQMRQEQQKHQYLMNANNYYMPGAMQQYQS
GYPNPNQPIYGNPQFHPQNMMPQATTDSNAPGSVPGQAQMSTANMPMSMNQMGTIQSMPQ
LTNTFAAMSTSAGAINQSSVSAQPSMNQSNLRPNLTQQLPLQQQMLLQQMHQMRMPVQPG
MHQIVPQTIANGMPGQNIPQQNGQTAQLPKQNMPNQPQQQQQPGGMMPQMSVAQQNLNQQ
LINPNNPMMGLQMQNMRMPLMQGNQPNVNQQVPVSGYPTMNIQNQSNIQQPVSQAQNMQP
QSQMPMPVQAMSMQGQQMMQGQSLPGQAQGVQMNNNAPQTNQNLPAQGQQVPQTQGQQMP
QHLHQPQMSVNQQMSMPGLGMQPSNQQMMMQGQQIASQGQMMMNQGQTQQGQLPGSQQMN
QGQISSPHQGQISGGHQGQLPTIHQGQISGGHQGQQMPQGQLPPGNPGQMQIGQQMQMGP
SQQMQQVPQMQAQQMQGQLPQQVGMPQQMQQPLQQGQPGQNMPGQPKMQQPNFNNAPQGP
SPSGTNPQQQQQQPQSKPEHNNNTAELISFD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagccaataattttgataagttacttgataaagcgacaagtaatctacgcttg
gaccccgattggccgacaatcctacaaatatgtgatttgattaggcaaaatgattgttca
ccaaaatatgcagtggcagcagtaaaaaagaaactgtattcacagaaccctcaccaggct
atgtttgctctcctcacactagagagtattgttaaaaattgtggctctggcgtacacgat
gaagtaacatcgaaggctttttgtgagatgctacgtgatctagtgaagacaacacaacac
gacaatctgcgcaacaaaatactagaactcattcaagcttgggctttcgccttccgaaac
tcaccgaaatatagagctgtgcaggacacagtgaacattttaaaagcggagtgttacaag
tttcctccactcaaggagtctgacgctatgttttctgctgatactgccccggagtgggct
aacggagaggtctgtcacagatgccgagtggcattctcgttgatggtgcgccggcatcac
tgccgtgcttgtgggcaagtcttctgccagcaatgcagctccaagacatctacattaccc
aagtttggtatagaaaaggaggtgcgtgtctgtgatgcttgctatgataaagttagcaga
ccgccacagtcatccactaaactggatattgtggatacttccagcgactatggacccaca
gcggcaactcagcagaagcgtaccggtggcaagacagctgaggagctgcaggaggaagag
gaactgcagctggcgctcgctctcagccagtccgaggccgagcagaaagaaaaggagcgc
aagtcgcgcgctcacatcttgccagaaccgacaccgcaccatcctactgtgtcaccaacg
ccatcatcggtaagcgcttcgccggagcacagcacgcaagccaactcggagctgtcgcgg
tacttggaccgcaactactgggagcagcgcctctcacgagacaatgccgtcgcgcccact
gcgcccgcacccgcttcacatgcctctgatattactgaagagttcccgaagccttcagcc
acgaaagctcaagatgatgacgccgaagataaagaaattgacgaatttgttgaatctctg
aaatctcaagttgaaatatttgttaacagaatgaaaagcaactcttcgcgaggccgatca
attgcaaatgatactgccgttcagactctcttcatgaacataacggcgatgcattcccga
ctattgcgctatatacaacagcaagacgacaaacgtgtctacttggagagtttacaggat
aaagtcactcaaatcagagacagtcgcgcggctctcgatacgctgagggccgaacatgca
gccagactagcagccgccgctgaagctgccgagcgacagagacaaatgcaaatggccgcc
aaactgcaagccatgaggaagaaaaagcacgagtatctgcagtaccagaggcaactggct
ttacagagagtacaggaacaagagagggagatgcagatgaggcaagaacaacagaagcat
caatatttgatgaatgctaacaactactacatgcctggtgccatgcaacaataccagagt
ggttacccgaatcccaatcaaccaatctatggcaacccccagtttcatccacaaaacatg
atgcctcaagccaccactgacagcaatgcacctggatcagttccaggacaagctcaaatg
tccacagctaatatgcctatgagcatgaaccagatgggaacaatacagtccatgccacag
ctcacaaatacatttgctgctatgtccacatcagctggagctattaatcaaagctccgtc
agtgctcagccatctatgaatcagtcaaacttacgacccaatttaactcaacaattacca
ttgcaacaacaaatgcttctacagcaaatgcatcagatgcgaatgcctgtgcagccaggt
atgcaccaaattgtgccacaaactattgctaatggcatgcctggacaaaacattccacaa
cagaatgggcaaactgctcagttgcccaaacaaaacatgccaaatcaaccccaacaacag
caacaaccaggtggtatgatgcctcagatgtctgttgcccaacaaaatctcaatcaacag
ttaataaatcccaacaatccaatgatgggacttcagatgcaaaatatgcgaatgcctctc
atgcaaggtaatcaaccaaatgttaaccaacaagtgccagtgtctggataccccaccatg
aacattcaaaaccaatctaacattcaacaacctgtatctcaagctcagaatatgcaacca
cagtcacaaatgcctatgcctgtgcaggccatgtctatgcagggacagcaaatgatgcag
gggcaatcattacctggacaggctcagggtgtacaaatgaataataatgctccacaaaca
aaccaaaatttacctgcccaaggtcagcaggtgcctcaaacacaaggccagcaaatgcca
caacacctacatcagccacagatgtcagttaatcaacaaatgtccatgcctggcctcgga
atgcaaccatcaaatcagcaaatgatgatgcaaggacagcaaattgcttctcaaggtcag
atgatgatgaaccagggacaaacacagcaaggacaattacctggctctcagcaaatgaac
caaggacaaatttcatctccccaccagggtcaaatatcaggtggccaccaaggacaactg
ccgactatccaccagggtcaaatatcaggtggccaccaagggcaacagatgccacaaggt
cagttacctcctggcaatccaggccagatgcaaataggtcaacagatgcaaatgggtccc
tctcagcagatgcaacaggttccacaaatgcaagcccagcaaatgcagggtcagctgcca
caacaagtgggaatgcctcagcagatgcagcagcctttacaacaaggacagcctggtcaa
aacatgccaggacaaccaaaaatgcaacagccgaactttaacaacgccccgcaagggcct
tcgccgtccggcaccaatccacagcagcagcagcagcaaccacaaagcaagcctgaacat
aataacaacacggctgaacttataagtttcgattga
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