Trichoplusia ni (cabbage looper): 113491973
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Entry
113491973 CDS
T05757
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113491973
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113491973
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
U-box type E3
113491973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-CCHC
zf-CCHC_2
U-box
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113491973
NCBI-ProteinID:
XP_026725010
UniProt:
A0A7E5V9P8
LinkDB
All DBs
Position
3:complement(12789237..12806446)
Genome browser
AA seq
1730 aa
AA seq
DB search
MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLQITNAQTKEVYVDD
NTLIPKNTSLLVARVPLSQQPKKQWEGTNSNQASLHKDVAPNKGLADLSRMEGSEQDKIN
AMISQSTFDYDPSNYQKIRGQNQRGLVPTNYICYKCQKRGHWIKDCPAANSGDPIEIRRS
TGIPRSFMVPVEGPKAPGAMMTPSGTFAVPAVDHEAYLASENAGGADTPTNAPAAPDMNI
PDELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEIAPTTLIPNR
FLRNSVSSFRNQTGYSRRMPHRPAAAPVQQQHAPIEPPPVPQVQPPPNGTAQPGSSGEGR
VEASAASVPIASSGPSRPSGPSVPSRPSGPSGPTRPSGPSGPNRPSGPSGPSRPSGPSGL
SKPGPPSVASAAAGDESDGSADDNITLTLPAAHRAPAPAPAPADRHRHPRYVQPPPGMKP
PALETPPNMLINMPRIDEQRASTPTIDERRDTLPNQVVFNRGAPPPFIPGALPPPRRYNS
PFRRTMGSNGPRPYNDRYPPEPYQPPPPGIKDSPTNGHGEDPLEAFNRMIREKEMRAKRR
EEERRRAVSGSRSSRSRTPRSPRSPRSPRSPRSPRSQRSARSPRSPRSPRAPRSPRLRYS
RSRSISRGRLRRSPWSPRRRRTRERTLSLTRSPSPRRRHRSPLRYRSPLRSPLRSPLVRS
PLRTPLRSPLRSPPRSPLRSPPRSPLRSPLRVPMRSPPPQRNMSPHRYAGVYDELLSPPR
RIVEPPYGARYGPRSGAPPPGYPPMGVKQMPPMGNLPVQSDQPLPGYRGRYDGPPFEEIP
PGVEPPVPGFEPSPFEKPQFGPPGSIDRDRLPPPNYRDPYRPPSYTHNDGPGGYRDNMTI
PPPVPNEIPVHVGDQPPRYRDNYRPGHYRDQGPMPFRDGQQYREPGPQGPYRDPNFRGGP
PPFRDNSYRNVPYREGGFRDNMPHNSFREPGVPFRPPSADPREVIPPNYHDSNYRDNYRE
ESGSRDHNRPGFRSNVRNRGGLRRTNVEHDRHRDREGRDRERFNENREPTDKTERPRDSE
RRTGYEKVRDAREGREDRTKEYERNRDYDKERDHDRTTPDKKARASPKRSRDTREKKRSE
SRGRSRDRESRREKKEERTREKSSADRSREHKDKEKKIKERKKKKREKEKDTDKKKKRDK
KDKKDKDHVKKEEGDSEKLDVKGDEKESSEVNIEKQQDVIKTENVETEISTIKKEDSPPT
AESTEKPAVDLYGDEASEAVDKEIIENYVKTEDKGDTRSTEIKNEDDMNISKEEPFDGIE
LQATAEELDLKADLEASNPTSKEMLASLPELSKWEVDEENAEKSKEPGEITSPEEEEDGS
KVTSDVIKRAENAIFAKAINTLRPIEIKKISSDRIKLYGDEVPKTAMSNMQITVPVADSE
PRSIEINERKKRYSKTPPPRLSVKDRLGGKVEDVRRGRETRVVQSTVERVKSRSKTPKRE
QTYRRVTVERDRGRKQQDRVESAKSDRRLMSEAVKTNEKHRARSPHEKKFIDKTGKEDKK
LNYENTQRDRGLEKNAHVEPKNVHVDRERKKSTLDEAHFEPDYDENVESDHENKEEIVKK
RERSLSPSGYIETKKAKLDHETIKLDLTNVKKKPDSESESTSDSEYSSSSTSSDARKRKK
KKKRNKKKKKRAASESESESESSSDDHKKKKKKRKHKKKSSKKKKKSKHK
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcattacaagtttaaaagtgcgttggattatgacacggttacattcgatggg
ctacatatatcagtaggcgatctgaaagccgccatatcgcaacagaaaagaattggaaag
acgtcagattttgatcttcaaattactaatgcccaaacaaaagaagtctatgtggatgac
aatactctaataccaaagaatacgtccctacttgttgctagagttccactatctcagcag
cctaaaaaacagtgggaagggaccaacagcaaccaagcttcactacataaagatgtcgct
cctaacaaaggattggctgatctgtctcgcatggaaggtagcgaacaggataaaattaat
gctatgatatcacagtccacttttgactacgatcctagcaattatcagaaaattagagga
cagaatcaaagaggtcttgtgccaactaattatatctgttacaagtgtcaaaaacgtgga
cactggattaaagattgccctgctgcaaactcaggagatccaatagagataaggagaagt
actggtatcccccgtagtttcatggtacccgttgagggtccaaaagctccaggcgcaatg
atgactcctagtggaacctttgctgtgccagcggttgatcatgaagcctatttggcttca
gaaaacgctggtggtgcagatacaccgacgaatgcgcctgcagcgcctgatatgaacata
cctgacgaactaatatgcagcttatgtcgggatttactcacggacgcagtgatgataccc
tgttgtgggaactcgttttgtgatgaatgtatacgaggcgcgcttttggaatcagaagat
catgaatgccctgattgtcgtgaaaaagaaattgcaccgactacgttaatacctaatagg
tttttaaggaactcggtgtcttcgttccgtaatcagacgggttacagccggcgcatgcca
cacaggcccgcggcggcgcccgtacagcaacagcacgctcccatagagccccctccagtg
ccacaagttcaaccgccgccgaatggtaccgctcagcctggctccagtggtgaagggcgt
gtcgaggcgagcgcagcgagcgtgccgatcgcctcgagtggaccgagcaggccgagcggt
ccgagtgtgcccagcaggccaagcggtccgagtgggccgactaggccgagcggtccgagt
gggccgaataggcctagcggcccgagtgggccgagccggccgagcggtcctagtgggctg
agcaagccgggcccgccgagcgtggcgagcgcggcggcgggcgacgagtctgatggctcc
gccgacgacaacatcacgctgacgttgccggcggcgcaccgcgcgcccgctcccgctccc
gcgcccgccgaccgccaccgacacccgcgctacgttcaaccgcccccaggtatgaagcct
cctgcattagaaactcctccgaatatgctgattaatatgcccagaattgatgagcagaga
gcaagtacacctacaattgatgagagaagagatactttgcctaatcaggtggtgtttaat
cgtggagctccgccaccgtttatcccgggcgccctgccaccgccgcggcgttacaattcg
ccgtttcgtagaacaatgggttcaaatggtccccgaccgtataacgatcgttaccctcca
gaaccttatcaaccaccaccacctggcattaaagactcgccgactaacgggcacggagag
gatcctctggaagcctttaaccgaatgattcgcgagaaagagatgcgagcgaagcggcgc
gaggaggagcggcggcgcgccgtgtcggggtcgcgcagctcgcgctcccgcacgccgcgc
tcgccgcgctcgccccgctcgccgcgctccccgcgctcgccgcgctcgcagcgctcggcg
cgctccccgcgctcgccccgctctccgcgcgcgccgcgctcgcctcgcctccgatactct
agatcacggtctatctcacgcggtcggttgcgaaggtcaccatggtcgcctcgacgacga
cgtactcgtgaaaggacactatcactcacaaggtctccgtccccgcggcggcggcaccgc
tccccgctgcgctaccgctccccgctgcgctcgccgctccgctcgccgctggtgcggtcc
ccgctgcgcactccgctccgctcgccgctgcgctcgccgccgcgctcgccgctgcgctct
ccgccccggtcgccgctccgctcaccgttacgagtcccgatgcgatcgccgccgccgcag
aggaatatgtctccgcatcgatatgctggtgtttacgatgaactgttgtccccgccccga
cgtattgttgagccgccctacggagccagatacgggcctaggagcggcgctccgccacca
ggatacccaccaatgggtgtcaaacaaatgcctccaatgggtaacctcccagttcaatct
gaccaacctttgccaggttatcgagggcgatatgacggtccaccctttgaagaaatacca
cccggtgttgaaccgcctgtgcccggcttcgaaccgtcgccttttgaaaagcctcaattt
ggcccgcccggttcgatagatcgcgaccgattgcctcctcctaattacagagatccttac
aggccgccatcgtatacccataatgatggtcctggtggttatagagataacatgacaata
ccacctcccgtaccgaacgaaatacctgtacacgtaggtgatcagccgccacgttacaga
gataattataggcctggccattatcgtgatcaaggcccgatgccgtttagagacgggcag
caatatcgggaaccaggacctcaaggtccgtatcgtgatcctaactttagaggtgggcca
ccgccattccgtgataactcttacaggaatgtaccttatagggaaggtggttttcgggac
aatatgccacacaatagtttccgtgaaccaggcgtgccatttaggccacctagtgccgat
cctcgtgaggttataccgccaaactatcatgattctaattatcgggataattatagagaa
gaaagtggctctcgagatcacaatcgaccaggatttaggtcaaatgttcgcaacagaggc
ggactgcggcgaactaatgtcgaacatgacaggcatagagatagagagggtcgcgataga
gaaagattcaatgaaaatcgtgaaccaactgacaaaacagaaagaccgcgtgattcagaa
cgaaggactggttatgaaaaagttcgagacgctcgtgaaggacgtgaagatcgaacaaaa
gaatatgaaagaaaccgggattatgataaagaaagggatcatgatagaacaactcctgat
aaaaaagcccgagcttcgcctaaacgtagtagagacactcgggagaaaaaacgtagtgag
tctcgagggcgttctcgtgatagagagagtaggagagaaaagaaagaagaaaggactcgt
gagaaatcatcagctgatagaagtagagaacacaaagacaaagaaaagaaaatcaaagaa
cgcaagaagaagaaacgtgaaaaggaaaaagatacggacaaaaagaaaaagcgtgacaaa
aaggataaaaaagacaaggatcacgttaaaaaagaggaaggtgattctgaaaaacttgac
gttaagggtgacgaaaaggaaagtagtgaagttaatattgaaaaacaacaagacgtaata
aaaacagaaaatgttgaaactgaaatttcaactattaaaaaagaagactcgcctcctaca
gccgagtcaactgaaaagccagcggttgatctatacggtgatgaagcatcagaagcggtc
gataaggaaattattgaaaattatgtcaaaacggaagataaaggcgacacacggtctaca
gagatcaaaaatgaagatgatatgaatatatccaaggaagaaccattcgacggaattgaa
ctacaggctaccgcagaagagttggatttgaaagccgacctggaagcgagcaacccaaca
agtaaagaaatgctggcaagtttgcctgaattgtcgaagtgggaagtagatgaagagaat
gcagaaaaatctaaagaaccaggtgagattacttcacctgaggaagaagaagatgggagc
aaagtaacttctgatgtcataaaacgtgccgaaaatgctattttcgctaaagcgattaat
accttaaggcccatagaaattaaaaagataagcagtgatcgaattaaactttatggtgat
gaagtaccgaaaacagctatgagcaacatgcagataacggttccagttgcagattctgaa
cccaggtcaattgaaataaatgaaagaaaaaagaggtactctaaaacacctcctccgcgg
ctatcagttaaagatcgcctcggcggaaaggtagaagacgtgagaaggggaagagaaaca
cgagttgtacagagtactgtagaacgtgtcaagtccaggtcaaaaactccaaaacgcgaa
caaacctacagacgcgtaaccgtggaaagagatcgaggtcgtaaacaacaagatagagtg
gaatcagcaaaaagcgatagacgattgatgtctgaagcagtaaagactaatgaaaaacat
cgagctcgaagccctcatgaaaagaagtttattgataaaactgggaaagaagataagaaa
ttaaactacgaaaatacccagcgtgatagaggcctggaaaaaaatgcccacgtagaacca
aaaaacgtacatgtagaccgagagagaaagaaatcaactttggatgaagctcattttgaa
ccagactacgatgaaaatgtagaatcggatcacgagaataaagaagagattgttaagaaa
cgcgaacgttcattatcgccttcagggtatattgagacaaaaaaagctaaactcgaccat
gaaaccattaaattggatctaactaatgtcaaaaagaaaccagattctgaaagtgaatca
actagtgattcggaatattcatcgtcttcgacgtcttctgatgctcgcaagcgtaagaag
aaaaagaaacgcaataagaaaaagaagaagcgagcggctagtgagagtgagtcggagtct
gaatccagctctgatgatcacaagaagaagaagaagaaacggaaacataagaagaaatct
agtaagaagaaaaagaaatctaaacataagtaa
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integrated database retrieval system
