Trichoplusia ni (cabbage looper): 113492095
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Entry
113492095 CDS
T05757
Name
(RefSeq) Fanconi anemia group I protein homolog
KO
K10895
fanconi anemia group I protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113492095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492095
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
113492095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S1
FANCI_HD2
FANCI_S4
FANCI_S2
FANCI_S3
FANCI_HD1
ATG16
Motif
Other DBs
NCBI-GeneID:
113492095
NCBI-ProteinID:
XP_026725194
UniProt:
A0A7E5VA98
LinkDB
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Position
3:complement(15349267..15367209)
Genome browser
AA seq
1355 aa
AA seq
DB search
MDPSKVFNKLKELGHVHSKREELREFCKLKTEQILKFLPRRILNSDGCDVLDCILNGFPE
NGTAAKVKVKIVEIVLQTMRKENTSLTHCSDVTSRLCLELPRLPVEDLVRWCNDSIQSIV
DDSDVNMIWRDVLPECMNAITSQDTIKHCGSELSSTEYKEQCVHTLCQCRWKEGQLVQLA
AMFKDMQLSKNDHRQVVNKICSYIIDTPPDTLPPLVHQLLKLCKTYNLDTVLSYLSFYFS
TRLYSKLEPPPQDSESTTIDIDDIVPHSSAELSRCLSTCLFHTSRGAADPAQVRRHVRLW
PRTQLLRAPFIIDLALAMSDKGADFRSVCLDVIRSAIEQRAMDDLRSRESAWVRSVIPPD
VNVVSVLKLITTESANHRQLTVVGLINLAFLLLSVNRLKPVAPTCWSHGKLILVRLCKAQ
PETAGHILSQLADKLCGDASQKQYADCLYILCKLTPVSVERCSALSSIVEGCQASGADYS
AAAAVLDAVHPLLNFSTRTRDTLVMVCRKGLYSRDSQHRCVALSGLLSLLRHVRVSGAPG
ASHTDQSHSDQFSAHSYLTQLTVDLHATQQGNVVTSRVRNEAMCMEVVSILRRCLVQDAL
VKQLLYTQIYDCAKDKPSLHESILELLYEHLSKYLPDGDGVATLLFNKCVQMSGAGAILV
EPIARLLYSVAQFLQATEEEDLEDILSSQPAESGHAFLKNKLSAIMTKLCGSDSFGNIDM
EDPGLSDLTPESKAKCLKVQQILQCYEALIAHQIMQWNQNSTNAANIVHKLFKACNELLE
QTKVLPKSSKKGNKTLNETRETVKSQKSQKTQKSQKEKGKAPVKLGNLVKDKAGPFKQLP
CLWDLKFCLRIVELLYSEFVPWSSLDQRNHIRGRRDFHIWSLKNVQSVLLGDRLDKKAVA
THVVGIAAVIYNRCVCRFQDMCDFDDQTTLSCLEVFKTCLTLMFSPKYSLKMDAVLSTCL
VTVTEGRAPTGPECIATILESIHSALLHIEDESVPDERDLIVKKQLAVLIQIATLLLETP
IATCPQKTSILVKFEDYIRTSKQDCLSLIGPLLTAFCSEQQEAPLLDELLAKLSCALGRI
DEEDTSAGEDTATFPAIEARSGHGVLGALCGALARRGRAAEQLLGRARDLAAASRPAAHS
AQLRIEKELTELYKSLVVQLCQLTSWTLSCCKLRCCAGAGSERVLGAAVRLYALLAALAR
QLQVGLAQTVRFERLLKLSGKKLSTVTDNLITYLEASQQQHNATKVLRETKLIPRLVLEA
ETFSKQVILLANKGNLNYQQYLSLGTARDFRIKAPVLQEVLNAREQADETREEDVDINDA
TTEIIPPVDDDNDNEEEIEEDSDEEASRRKRRRVS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtaaagtgtttaacaaattaaaagagcttgggcatgtacacagtaaacgt
gaagaactacgtgaattttgtaaacttaaaacagaacagatattaaagttcttaccgcgg
cgtattttaaatagtgatggctgtgacgtcttagactgtattttaaatggatttcccgaa
aatggaacagcggcgaaagtcaaagttaagatcgtggagattgtcctccaaaccatgcgg
aaagagaatacgtctcttactcactgcagtgatgtgaccagcaggctgtgtctggagcta
ccgaggctgcctgtagaggacttagtgcgatggtgcaatgatagcatacagtcaattgtg
gatgatagcgatgttaatatgatttggcgcgacgtgcttccggaatgcatgaatgcgatt
acatcacaagacaccatcaaacactgtggctccgagctaagtagtacggagtacaaggag
cagtgtgtccacacgctgtgtcagtgtcgctggaaagaggggcagcttgtacagcttgct
gctatgttcaaggacatgcagttatctaagaatgaccacaggcaggtggtcaacaagata
tgttcatatataatagataccccacccgacacactgcctcctctagtccatcagttgtta
aaactatgcaagacgtacaatttggacacagtactgtcttacctgagcttctacttcagc
actcggctgtacagcaagctggagccgccgccgcaagactccgagtcaaccaccatcgat
attgatgatatagtcccgcacagctcggcagagctaagccgctgcctgtcgacgtgcctg
ttccacacgtcgcgcggcgcggccgaccccgcgcaggtccgccggcacgtgaggctgtgg
ccgcgcacgcagctgctgcgggcgcccttcatcatagacctggcgctcgccatgtcggat
aagggcgctgacttcagatctgtgtgtttagatgtaataagatcggcgatagagcagcgc
gctatggatgacttgagatcacgagagtcagcgtgggtacgctctgtgataccacctgat
gtcaacgtggtcagcgtgctcaaacttattactactgaaagtgccaaccacagacagcta
acagtggtgggtctaatcaacctagcattcttattactctcggtgaatcgactgaagcca
gtggcccctacttgctggtcgcacggtaagctgatactagtccggctgtgcaaggcccag
cccgagacagcgggacacatactgagccagctcgcggataaactgtgtggagatgcgtca
cagaaacagtatgcagactgcttatacatactatgcaagttgaccccggtgtcagtagag
cgttgctcagccctaagctccatagtggagggctgccaggcgtccggcgcggactactcg
gcggccgcggcggtactcgacgccgtacacccgctgcttaacttcagtactaggactaga
gatacactggtcatggtgtgcaggaagggattgtattctagagactcccagcaccgctgc
gtggcgctgtcgggcttgctgtcgctgctgcgccacgtgcgcgtgagcggcgcgcccggc
gccagccacaccgaccagtcccacagcgaccagttcagcgcgcactcctacctcacgcag
ctcaccgtggacctgcatgccacgcaacaggggaatgtggtaacatcgcgagttcgtaac
gaagcgatgtgtatggaagtagtgtccatactgcggcggtgtctcgtgcaagacgcgctc
gtcaaacaactgctttatacacaaatatacgactgcgcaaaagacaaaccgtctttacat
gaatcgatcctggaacttctgtatgagcatttgagcaagtatttacccgacggggatggg
gttgccactttactcttcaataagtgtgtgcagatgagtggtgctggcgccatattagtt
gaaccgatagcccgcctcctgtactcagtcgctcagttcctccaagctacggaggaggag
gatctcgaagacatcctgtccagccagcccgcggagtccggacacgccttcttgaagaac
aagctctctgctatcatgacgaagttgtgtggaagtgatagttttgggaatattgatatg
gaggatcctggcctatcagacttgacgcctgaatcgaaagctaagtgtctgaaggtgcaa
cagatactgcagtgttacgaagctctcatcgctcaccagataatgcagtggaaccagaac
agtacgaacgcagccaacatcgttcacaagctgtttaaagcgtgcaatgaactgttggaa
cagacgaaggtgttaccaaaatcaagcaagaaaggcaataagactcttaatgagacacga
gagacggtaaagtcgcaaaagtcgcaaaaaacgcaaaagtcgcagaaggagaaagggaaa
gctccagtcaaactgggtaatctagtcaaagataaggcgggaccgtttaaacaactgcct
tgcctgtgggacctgaagttctgtttgagaatcgttgagttgttgtacagtgaattcgtc
ccctggagctccctggatcagcgcaaccatatccgcggtcgccgcgacttccacatctgg
tcgctgaagaacgtgcagtccgtgttgctcggggaccgcctcgacaagaaggcagtagcc
acgcacgtcgtcggcatagctgcggttatctacaatagatgtgtttgtaggtttcaagat
atgtgtgatttcgacgatcaaacgactcttagttgtttggaagttttcaagacctgtctg
acattaatgttctcacctaagtattcgttgaagatggatgcagtgttgtctacctgtctt
gttactgtcactgaaggcagagcgccaaccggaccagaatgcatagcaaccatcttagaa
tcgatccacagtgcactcctacacatagaggacgagagcgtgccggacgaaagagatctg
atcgttaagaaacagctggcggtactcatacagatagcgacactgttgctagaaacgccc
atcgctacgtgcccgcagaagactagcatactagtgaagttcgaagactacatccgcact
agcaagcaagactgtctctcgctaataggtccgctactgactgcattctgcagcgagcaa
caagaagcgccacttctagacgaactacttgcgaaactgtcgtgtgctctcggcaggatt
gatgaggaagacacatcagcaggcgaggacaccgccacgttccccgctatcgaggcgcgc
agcgggcacggcgtgctgggcgcgctgtgcggggcgctggcgcggcgcgggcgcgcggcc
gagcagctgctgggccgcgcgcgggacctggccgccgccagccggcccgccgcgcactcc
gcgcagctgaggatcgagaaagaactgacggagttgtacaagtccctggtagtgcagctg
tgccagctaacgtcgtggacgctgtcctgctgcaagctgcgctgctgcgcgggcgcaggc
tccgagcgagtgctgggcgccgccgtcaggctgtacgcgctgctggccgcgctcgccagg
cagctacaggtcggactggcgcagacagtgaggttcgagcgccttctcaaactaagcggc
aagaagctatcgacagtgacagacaacttgataacatacttagaggcgtcgcaacaacag
cacaacgcaaccaaagtgttgcgggagactaaactaataccgcgactcgtgttggaggcc
gagacgttcagcaagcaagtcatcttgctggctaataaggggaatttgaattaccaacag
tacttatcgttgggaactgcaagagatttcagaatcaaagcgccggtgttacaagaagtc
ctcaacgcccgagaacaagctgacgagactagggaagaagacgtggatattaatgacgct
acaacagaaatcattccgccggtagacgatgacaacgataatgaggaggagattgaagaa
gacagcgacgaagaagcttctagaaggaaacggagaagagtctcttaa
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