Trichoplusia ni (cabbage looper): 113492122
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Entry
113492122 CDS
T05757
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113492122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113492122
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492122
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113492122
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113492122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
113492122
NCBI-ProteinID:
XP_026725242
UniProt:
A0A7E5VAD3
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Position
3:15743675..15747078
Genome browser
AA seq
962 aa
AA seq
DB search
MVDINKYLESQLALAKNRCETKGKNDSVSEKSKAAADIISKKQSKLKHGKQSKEISKESS
EPTTSRTRTTTSSTDKDSDFEYLPSEEEGDEEHLISVSLPSTSRSKQNIKKILDDGDTTA
YNERIELWKKNLADALASNHDGGMMTADIQFVLEGNKDPEEIHELQNGLKIPNYIWKQLY
KFQKVGVKWLWELHQVESGGLLGDEMGLGKTIQIIAFLAGLSKTDVGAWAGLGPSIIVAP
ATVIYQWVSHFHYWCPHLRVAVLHHTGTHAGNHNQLIRDLHSAHGILLITYAGIVKYTKD
LTARKWHYIVLDEGHKIRNPDTQVSKLVKKFQTPHKILITGSPMQNSLQELWSLFDFMRP
GLLGTYAAFMDHFAVPITQGGYANATEYQEATALEIAKALKLIITPYMLRRTKAEVQDHI
KLPEKNEQVLFCALTQEQKDLYMGYLTGTTVRSILDKENKFGNPLRARILVALCTLRKIC
NHPDLYLYEAQEDCENIDEEQFGNYKRSGKMLVVNSLLRIWQKQGHRALIFSQSRGMLCL
LEQYLQVQGYKYLKMDGTVSVGQRQSMIKTFNENSEYLVFLATTRVGGLGVNLTGADRVI
VYDPDWNPATDDQAKERAWRIGQQRNVTVYRLLSAGTIEEKIYQRQIFKHFLSNKILVDP
NQKNVLTTSTLQGLFTLEELNCDGDTETASLFKHTKINIDDTKSKKKSEDKEISYSKKKK
IEAMKRMAKEISKKISKAKNEKLEEERDPREEYKKKRELLLNPPKVEVPEINLVDDQVTN
IPFENILSELDIVNLHAKKDYEENLIKNALKSQENNKEEKSEVSDGGNDVDEQKPPEIEE
KVSQEQVKEQTLDTSSKLHDGVTDIEVKKSLKRSHSPSPEVEVENLVAIKKVKKKKHKRD
REKETNDDDYVLSKLFAKANVKSALQHDVVVGLAEKEKRHRIKQEAVKKAKDAVRAIRFS
SK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggttgacattaacaaatatttagaaagtcaacttgcacttgcgaagaacagatgtgaa
actaaaggtaaaaacgacagtgtttcagagaaaagtaaagcggcagcagatatcatttca
aaaaagcaatctaaattgaagcatggaaagcaatctaaagaaataagcaaagaatcttca
gagccgactacatcgagaacgagaactaccacaagctctacagacaaggactcggatttt
gaatatttaccatcggaagaggaaggagatgaagaacacctgattagtgtgtcacttccc
tccacatcgcgctccaagcaaaatataaagaaaatcttagacgatggagacactacagct
tataacgaaagaattgaactctggaagaaaaatttggctgatgcgttagcaagtaaccat
gatggagggatgatgacagcagacatccagtttgtactggaaggtaataaagatccagag
gaaatacatgaactacaaaatggtttaaaaataccaaactatatttggaaacagttgtac
aagtttcaaaaagttggtgtgaagtggctttgggagctgcatcaagtggagtcaggaggc
ctactcggcgatgagatggggctggggaaaacaatccaaatcattgcattcctggctgga
ttatccaagactgatgtaggtgcctgggcaggactcggaccatcaattattgtggcacca
gctacagtgatctaccagtgggtatcccattttcactactggtgtccacatttaagagta
gcagtactccaccacacagggacgcatgcaggcaatcacaaccaactgatcagagacttg
cactcagcacacgggattttgttgatcacttatgcaggcattgtgaagtacactaaagat
ttaacagctcgaaaatggcattacatagtactagatgagggacacaagattaggaaccct
gacacacaagtcagcaaacttgtaaaaaagtttcaaactcctcataaaatactcattaca
ggttcacctatgcagaacagtttacaagaactctggtctttgtttgattttatgagacca
ggtcttttgggtacttatgcagcatttatggatcactttgcagtccccataactcaaggc
ggttatgcaaacgccaccgaatatcaagaagcaactgctttggaaatagctaaagcctta
aaattaataatcactccttatatgttaagacgaacaaaggctgaagttcaggatcatata
aaactaccagaaaaaaatgaacaagtcttattctgtgctcttactcaggaacaaaaggac
ttgtatatgggttacctcactggcactactgtaagaagtatattggacaaagaaaataaa
tttggcaatccattgagagctagaattttagtagctctatgcactcttagaaaaatatgc
aatcaccctgacttgtatctctatgaggctcaggaagactgtgaaaacatagatgaggag
cagtttggcaactacaaaagatctggcaaaatgctggtggtcaattcactgttaagaatc
tggcaaaaacagggccacagagccttaatattttcccaatcaagaggaatgctatgttta
cttgaacaatatttacaagtccaagggtacaaatatttaaaaatggatggtacggtcagt
gtgggacaaaggcagagcatgatcaagacctttaatgaaaattctgagtatttagtgttt
ttggctacaacacgggttggaggtttgggagtgaatctcacaggagctgacagagttatt
gtttatgacccagactggaatccagctactgatgaccaggctaaagagagggcttggaga
ataggccaacagaggaatgttactgtatatagactactatcagcaggaactattgaagaa
aaaatatatcagagacaaatctttaagcacttcttgagcaataaaatattagtagatccc
aaccaaaaaaatgttctgacaacaagcactctacaaggcctgtttactctagaagaactg
aactgtgatggggacacagaaactgcctctttatttaaacacactaaaattaatattgat
gatacaaaaagtaaaaagaaaagtgaagataaagaaatttcatactctaagaagaaaaaa
atagaagcaatgaagagaatggctaaagagataagtaagaaaatttcgaaagccaagaat
gagaagcttgaagaagaaagagaccccagggaagaatacaaaaaaaagagagagttatta
ttgaatccgcctaaggttgaagtacctgaaattaacttagtagatgatcaggtgactaac
attccatttgaaaatatattatcagaactcgacatcgttaatctgcatgcaaaaaaagat
tatgaagagaatttaataaaaaatgctcttaaatcccaagaaaataacaaggaagaaaaa
agtgaagttagtgatggagggaatgatgttgatgaacaaaaaccgcctgaaattgaagaa
aaagtaagtcaagaacaagtaaaagagcaaaccttggatacaagtagtaaattacatgat
ggtgttactgatatagaggttaaaaaaagtctcaagagatctcattctccaagcccagaa
gtagaagttgaaaatttggtggcaataaagaaagttaaaaagaaaaaacataaacgagat
agggagaaagaaacaaatgatgatgattacgttttaagtaaactttttgctaaagctaat
gttaaaagtgcattacaacacgatgttgtagttgggttagcagaaaaagaaaaacgtcac
aggataaagcaagaagcagttaaaaaagcaaaagacgcagtccgagcaatcagattttca
tccaaataa
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