Trichoplusia ni (cabbage looper): 113492152
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Entry
113492152 CDS
T05757
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113492152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113492152
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113492152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Utp13
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_WDR35_TULP_N
VPS8_N
WD40_like
NNH5
Nbas_N
Motif
Other DBs
NCBI-GeneID:
113492152
NCBI-ProteinID:
XP_026725290
UniProt:
A0A7E5VAH3
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Position
3:16114281..16117150
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AA seq
793 aa
AA seq
DB search
MTSLLKEVYEKTAEYTAFYTGGDIQWTTDGSNLLCHCDDVIKVIDVNSLTTSHSIGQADE
NEESDQIYTFQMSHDNKTIVTAHKSGLMKLWDQETGAQQKVWRSSHKGPVARLAFDNSDE
NIASGGSDGNIRLWDLTHHTCTSSLRGAMGVFSVLKYHPDSSKQLIFGAADDTKIRSWNS
KTGKEHIVYSGHFSKITSILFTPDGENMVSSGRDRVLILWNLNESKALKVVPVYESIEST
ILLPPTFKIPNFKKKLETDGIYVACAGEKGIVKVWNVAMSRLMFEQSNSLVSPASEEGGL
AITHLIFNDLRNVLSVVTADHNIIIHDLETFDCVKQLIGFTDEVLDIIFVGKDEKHLVVA
TNSQDLKYYEIDSMNCQILKGHTDIVLALASFPTKPEMFVSSGKDNSVRIWLQDSDNVVS
CIGVGTRHTASVGSVFTSQTSNDFFASVSQDSCLKVWSVPKDPSASDGKITTTFTELAHQ
MDINCVSIAPNDKMIATGSQDKTAKIWSEELALLGVLKGHRRGVWCVRFSPVDQVVLTSS
ADSTIKLWSIADLSCLKTFEGHESSVLKVEFVSRGQQILSSGADGLLKLWNIKSSETKMS
LDNHDGKVWSLAINKSESQVITGGSDSKLVKLQDVTAEKRMQMAKEREEMILQEQELMNL
LHDKQLIKALKLALRMGRPANVLKIVNEVLAGGNEKLYETLKEINHTQKEALLKFAAEWN
TNNKNCHAAQLVFNILAPEIISGNLRVPALASFIEGALPYTERHFERLTNLLQDLNFISY
TVNCMQPHAVNNV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgactagcttgttaaaagaagtatatgaaaaaacagccgaatataccgcattttacact
ggcggtgacatacagtggactacagatggctcaaatctcctgtgtcactgtgacgatgta
ataaaagtaattgacgtcaactcattaacaactagccacagcattggacaagcagacgaa
aatgaggaatctgaccaaatatatacttttcaaatgtcacatgataataaaactatagta
actgcgcacaagagtggattgatgaagttatgggaccaagaaacaggggcacagcaaaaa
gtttggagatcaagccataaaggtccagttgcaaggttggcatttgataactctgatgaa
aacattgcttctggaggctctgacggcaacatcaggctatgggatcttacacaccacact
tgcacaagcagtctacgaggagcaatgggtgtgttctcagtactgaaatatcaccctgac
tcatctaaacaattaatatttggagcagctgatgacacaaaaataagatcatggaattct
aaaactggtaaagaacatatagtttattcaggtcacttcagtaagataacttcaatactg
ttcacacctgatggtgagaatatggtaagttctggaagagacagagtcttaatattatgg
aacttaaatgaaagtaaggcactcaaagttgtgccagtatatgaaagtattgaatccact
attcttttacctccaacatttaaaataccaaactttaaaaagaagttggagactgatggc
atttatgttgcttgcgctggtgagaagggcattgtcaaagtatggaatgtagcaatgagc
agactcatgtttgaacaaagcaatagccttgtatctcctgcatctgaagaaggtggctta
gcaatcacacacttaatcttcaatgatttgcgaaatgttttgtcagttgtcacagcagac
cataacatcatcatacatgatctagaaacatttgactgtgtgaaacagttaattggattc
actgatgaagttctagatatcatatttgtaggcaaagatgagaagcatttagttgttgct
acaaacagtcaagatttgaaatattatgaaattgatagcatgaactgtcaaattttaaaa
ggccatactgacattgtactagctctagccagcttcccaacaaagcccgagatgtttgtt
tcttcaggcaaagacaattcagtgagaatttggttacaagattctgataatgttgtgtca
tgtattggagttggaacacgacacacagcatcagtagggtcagtattcacttcccagaca
tctaatgacttttttgcctctgtaagtcaagacagttgcctcaaagtatggagtgtcccc
aaagatcccagtgcatctgatggaaagataacaacgacatttactgaactggcgcatcag
atggatataaactgcgtgtctattgctccaaatgacaaaatgatagctacaggttcccaa
gataaaactgctaaaatttggtcagaggagttagcattgctaggagtactgaaaggccat
aggcgaggagtatggtgtgtgagattctcgcctgtcgatcaggttgtgttgacatcttca
gcagacagtacgataaagttatggtctattgctgatttgagctgcctaaaaacttttgag
ggtcatgagagttcagttttaaaagttgaatttgttagcagaggtcaacaaattctatcg
agtggggcagacggtcttcttaaactttggaatatcaaatcatccgaaactaagatgtcc
ctagataatcatgatggtaaagtctggtcactagcaatcaataagagcgaatctcaagtt
atcacaggaggttccgattctaaacttgtaaaacttcaagatgttacagcagaaaaaaga
atgcaaatggccaaagaacgagaagaaatgatattacaagaacaagaactgatgaactta
ttacacgataaacagctaataaaggctttgaaattagcgttacgaatgggaagacctgct
aatgtcttgaaaatagttaacgaagtactggctggtggaaacgaaaaactttatgaaaca
ctcaaagaaattaatcatacacagaaagaggcactactaaagtttgccgccgaatggaac
accaacaacaaaaattgccatgcagctcagctcgtattcaatattctagcgccagagatc
atttctggaaacctgagagttccagcattggctagctttattgaaggtgcgttaccatac
acagaaagacattttgaaagactaacgaacttattacaagacctcaactttatttcgtat
actgtgaactgtatgcaacctcatgctgttaacaatgtttaa
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