KEGG   Trichoplusia ni (cabbage looper): 113492152
Entry
113492152         CDS       T05757                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113492152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tnl03009]
    113492152
Ribosome biogenesis [BR:tnl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113492152
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Utp13 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IP5PC_F NBCH_WD40 Beta-prop_WDR35_TULP_N VPS8_N WD40_like NNH5 Nbas_N
Other DBs
NCBI-GeneID: 113492152
NCBI-ProteinID: XP_026725290
UniProt: A0A7E5VAH3
LinkDB
Position
3:16114281..16117150
AA seq 793 aa
MTSLLKEVYEKTAEYTAFYTGGDIQWTTDGSNLLCHCDDVIKVIDVNSLTTSHSIGQADE
NEESDQIYTFQMSHDNKTIVTAHKSGLMKLWDQETGAQQKVWRSSHKGPVARLAFDNSDE
NIASGGSDGNIRLWDLTHHTCTSSLRGAMGVFSVLKYHPDSSKQLIFGAADDTKIRSWNS
KTGKEHIVYSGHFSKITSILFTPDGENMVSSGRDRVLILWNLNESKALKVVPVYESIEST
ILLPPTFKIPNFKKKLETDGIYVACAGEKGIVKVWNVAMSRLMFEQSNSLVSPASEEGGL
AITHLIFNDLRNVLSVVTADHNIIIHDLETFDCVKQLIGFTDEVLDIIFVGKDEKHLVVA
TNSQDLKYYEIDSMNCQILKGHTDIVLALASFPTKPEMFVSSGKDNSVRIWLQDSDNVVS
CIGVGTRHTASVGSVFTSQTSNDFFASVSQDSCLKVWSVPKDPSASDGKITTTFTELAHQ
MDINCVSIAPNDKMIATGSQDKTAKIWSEELALLGVLKGHRRGVWCVRFSPVDQVVLTSS
ADSTIKLWSIADLSCLKTFEGHESSVLKVEFVSRGQQILSSGADGLLKLWNIKSSETKMS
LDNHDGKVWSLAINKSESQVITGGSDSKLVKLQDVTAEKRMQMAKEREEMILQEQELMNL
LHDKQLIKALKLALRMGRPANVLKIVNEVLAGGNEKLYETLKEINHTQKEALLKFAAEWN
TNNKNCHAAQLVFNILAPEIISGNLRVPALASFIEGALPYTERHFERLTNLLQDLNFISY
TVNCMQPHAVNNV
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgactagcttgttaaaagaagtatatgaaaaaacagccgaatataccgcattttacact
ggcggtgacatacagtggactacagatggctcaaatctcctgtgtcactgtgacgatgta
ataaaagtaattgacgtcaactcattaacaactagccacagcattggacaagcagacgaa
aatgaggaatctgaccaaatatatacttttcaaatgtcacatgataataaaactatagta
actgcgcacaagagtggattgatgaagttatgggaccaagaaacaggggcacagcaaaaa
gtttggagatcaagccataaaggtccagttgcaaggttggcatttgataactctgatgaa
aacattgcttctggaggctctgacggcaacatcaggctatgggatcttacacaccacact
tgcacaagcagtctacgaggagcaatgggtgtgttctcagtactgaaatatcaccctgac
tcatctaaacaattaatatttggagcagctgatgacacaaaaataagatcatggaattct
aaaactggtaaagaacatatagtttattcaggtcacttcagtaagataacttcaatactg
ttcacacctgatggtgagaatatggtaagttctggaagagacagagtcttaatattatgg
aacttaaatgaaagtaaggcactcaaagttgtgccagtatatgaaagtattgaatccact
attcttttacctccaacatttaaaataccaaactttaaaaagaagttggagactgatggc
atttatgttgcttgcgctggtgagaagggcattgtcaaagtatggaatgtagcaatgagc
agactcatgtttgaacaaagcaatagccttgtatctcctgcatctgaagaaggtggctta
gcaatcacacacttaatcttcaatgatttgcgaaatgttttgtcagttgtcacagcagac
cataacatcatcatacatgatctagaaacatttgactgtgtgaaacagttaattggattc
actgatgaagttctagatatcatatttgtaggcaaagatgagaagcatttagttgttgct
acaaacagtcaagatttgaaatattatgaaattgatagcatgaactgtcaaattttaaaa
ggccatactgacattgtactagctctagccagcttcccaacaaagcccgagatgtttgtt
tcttcaggcaaagacaattcagtgagaatttggttacaagattctgataatgttgtgtca
tgtattggagttggaacacgacacacagcatcagtagggtcagtattcacttcccagaca
tctaatgacttttttgcctctgtaagtcaagacagttgcctcaaagtatggagtgtcccc
aaagatcccagtgcatctgatggaaagataacaacgacatttactgaactggcgcatcag
atggatataaactgcgtgtctattgctccaaatgacaaaatgatagctacaggttcccaa
gataaaactgctaaaatttggtcagaggagttagcattgctaggagtactgaaaggccat
aggcgaggagtatggtgtgtgagattctcgcctgtcgatcaggttgtgttgacatcttca
gcagacagtacgataaagttatggtctattgctgatttgagctgcctaaaaacttttgag
ggtcatgagagttcagttttaaaagttgaatttgttagcagaggtcaacaaattctatcg
agtggggcagacggtcttcttaaactttggaatatcaaatcatccgaaactaagatgtcc
ctagataatcatgatggtaaagtctggtcactagcaatcaataagagcgaatctcaagtt
atcacaggaggttccgattctaaacttgtaaaacttcaagatgttacagcagaaaaaaga
atgcaaatggccaaagaacgagaagaaatgatattacaagaacaagaactgatgaactta
ttacacgataaacagctaataaaggctttgaaattagcgttacgaatgggaagacctgct
aatgtcttgaaaatagttaacgaagtactggctggtggaaacgaaaaactttatgaaaca
ctcaaagaaattaatcatacacagaaagaggcactactaaagtttgccgccgaatggaac
accaacaacaaaaattgccatgcagctcagctcgtattcaatattctagcgccagagatc
atttctggaaacctgagagttccagcattggctagctttattgaaggtgcgttaccatac
acagaaagacattttgaaagactaacgaacttattacaagacctcaactttatttcgtat
actgtgaactgtatgcaacctcatgctgttaacaatgtttaa

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