Trichoplusia ni (cabbage looper): 113492162
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Entry
113492162 CDS
T05757
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113492162
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113492162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
113492162
NCBI-ProteinID:
XP_026725307
UniProt:
A0A7E5VAJ4
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All DBs
Position
3:16447430..16449841
Genome browser
AA seq
734 aa
AA seq
DB search
MVRHNNQLPNNLTQLQNLIKRDPESYKEEFHQQLSHFETTLEIFNLNPTQYNKKLDEQAM
FLAQVAQCYLSEMKLFPQKIVDILKTHNTVLHNDMRLSLCKCLILLRNKNFVTAFDLLEL
FFLLLRCQDKHLREFLKTHIITDIKNINMKHKDMKFNSTLQNFMFSMLQDSNPKAAKLSL
DILVELYHKNIWNDQKTVNIIADIGCFSKITKVMVASLKFFLGRDEEEKEENSDSEEEID
PRDTMISNKFNKKTRKREKMVEKVKKQAKKIKKRKQKAPVFNFSALHLINNPQGFAEKLF
KKLESSNDRFEVKLMLLDVISRLIGLHNLFLFNYYPFIARLLLPHQREVTRILLFAAQAS
HELIPPEVLEPVMKAIANNFITERNSTDVMAVGLNAVREICARCPLAIGEDLLRDLVQYK
NYKEKSVMMAARSLIQLFRQSMPDMLHKKDRGRPTEASIELKNKKYGEMEIKDHIPGSEV
LLEKEEIKETGKNKKVNKKKKNQSDSEEDWVDVASSDSEINITDSEEEEDSDVEEGDEEE
IEEEAESGEEEGGDDKEQEGDETDNKKETPKPTQDRKILKANRKALNQKTKEEKLQSARE
IAMETIFTDEDFKRIEKAQLKKSISATKRKLNVTEEEDESGELVQLSAIENIHKKRKHDK
EARLDSVHKGREERDKFGYKDRRKNIHCSKTNREKRKTKNYQMVKHKAKGKIKRSFKDKQ
IAFRNYLIKQKKMR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtgagacacaacaatcagctgccgaataatctgacgcagttacaaaacttaataaaa
agagatccagaatcttacaaagaagaattccatcaacaactttctcacttcgagacaaca
ttggaaatattcaacttgaaccctacccaatacaacaagaaactagatgaacaagcaatg
tttttggcccaagtggcccagtgctatctcagtgaaatgaagttattcccacagaaaatt
gtcgacattctgaaaacacataacacagtattgcacaatgatatgcgtctgtctttatgt
aaatgccttattttgctaagaaataagaactttgtcacagcatttgatttacttgaatta
ttcttcttactcttaagatgtcaagataagcatttaagagaattcttaaaaactcatatt
ataactgatataaaaaatattaatatgaaacataaggacatgaaatttaattctacattg
cagaactttatgttctcaatgttgcaagactccaaccctaaagctgcaaaattgtctctt
gatatacttgttgagttataccacaaaaatatttggaatgatcaaaagactgtgaacatt
attgctgacattggatgcttctcaaagattactaaagttatggttgcttctttgaaattc
ttcttaggcagagatgaagaagaaaaagaagaaaattcagatagtgaagaagaaatagat
ccaagagacaccatgatatcaaataaattcaacaaaaagaccagaaagagggaaaaaatg
gtagaaaaagttaagaagcaagcaaagaaaattaaaaagaggaaacaaaaagcaccagta
ttcaatttttctgccttacatcttataaataatccacaaggatttgctgaaaaattgttc
aagaaactagaatcttctaatgacagatttgaagttaaattaatgttgttggatgttatt
tcaaggttgattggtttacacaacttgttcctgttcaactactacccatttattgcaagg
ttacttctaccccatcagagagaagtaactcgaatcctactgtttgctgctcaggcttca
catgaactgatccccccagaagttctagaaccagtcatgaaagctatagcaaataatttc
ataacagaaagaaattccacagatgtcatggctgtgggcctcaatgctgtaagggaaata
tgtgcaagatgcccacttgctataggtgaagacttactcagagatttagtccaatacaaa
aattacaaagaaaaatctgtgatgatggctgcaaggtctttaatccagttattcagacag
tcaatgcctgacatgcttcataagaaagacagaggccggccaacagaagcatccattgaa
cttaaaaataaaaaatatggtgaaatggaaatcaaagaccatatacctggttctgaagtg
ttattggagaaagaggaaattaaagagactggtaaaaataaaaaggtaaataagaagaaa
aagaatcaatcagatagtgaagaagactgggttgatgttgcttcttcagattctgaaata
aatataactgacagtgaagaagaagaagatagtgatgttgaagagggagatgaagaagaa
atagaagaagaagcagagagtggtgaagaagaaggtggagatgacaaagaacaagaagga
gatgaaacagataataaaaaagaaactcccaaaccaactcaagacaggaaaatactaaaa
gcaaaccgcaaagcactgaaccagaaaactaaggaggagaaattacaaagtgctcgtgaa
atagctatggagacaatcttcactgatgaagacttcaagcgcattgaaaaagcccaactt
aagaaaagtattagtgctactaaaaggaaactaaatgtaacagaagaagaggatgaatct
ggagaacttgtgcagctgtcggccatagaaaatatccataaaaagaggaaacacgataaa
gaagcaaggttagacagtgttcacaagggaagggaagaaagagacaagtttgggtacaaa
gatagaaggaagaatattcattgctccaaaacaaacagggagaagaggaagaccaagaac
taccaaatggttaaacataaagcaaagggaaagataaagagatctttcaaagataagcag
attgctttcagaaattatttgatcaaacaaaagaagatgcgttaa
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