Trichoplusia ni (cabbage looper): 113492170
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Entry
113492170 CDS
T05757
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113492170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnl03032
]
113492170
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492170
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113492170
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113492170
BRCA1-C complex
113492170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
113492170
NCBI-ProteinID:
XP_026725317
UniProt:
A0A7E5VAK5
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Position
3:16471474..16473645
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AA seq
630 aa
AA seq
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MWYLTSQNDTRIIYIVSSNQVLIGRSTDNEVCNFAIADDPSISRKHATLTAMDNGLFLQD
LGSRYGTYINNSTDKVEMNTNTKLKENDIVKFGKMNSIWKVNVANLITCTSTLKGDNLQN
LRLTLSKLGGILKSDWDDTCCYLTMPGITLTIKVVLALVQGSNIVTTEFWNKCLENVSNC
ETLPDPQDFVPEVMESTLNKEVVSFQPDNRRSSIFTGKKFIFFSRRQHEMYKTVLVKSGA
TPMLLSECRMTISMLCSPDVVVIQYTSTGVSQETQSQRSQMTDIVNQLKNKGKRVVADAE
IGLAILFCSSNKYCNPNFSFSSEVVKQISAPQKSSKVLAQESQEPTSQQKQPNVKINESL
VSEDGYDKLSVKRKLSDVITEIEVNPSKRIATCFVAEVKVESAKRGYPDDNDEFSKPPKK
MAIENEKNSSEQASNDDSNMFNFVKAPTTTESEKKPKKLNLSKPQKRKLNDNQPEGNLFN
FIQTDEDDVNASTVSKQSLFNNDKNKKDDSENVVQTTNLSKQEVSAQDISAMRGSKLKEL
MQRNLSSNSSPVNNTRRIKTEDLEDKMNKLDLCNTIVTTCSTLIKREPYKYETENTFSSN
VKNFKKFKKVWPIKRQSSVIQTSSMSLITS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtggtacttaacatcacagaatgatactagaatcatttatatagtttcatctaatcaa
gtcctaattggaagaagtactgataatgaggtttgcaactttgccatcgctgatgatccc
tccattagcagaaaacatgcaactttgacagcgatggacaatggtttgtttttacaagat
ctcggttcgagatacggaacttacattaataattctaccgacaaagtagaaatgaatacc
aacaccaaattaaaagagaacgatattgttaagtttggtaaaatgaatagcatttggaaa
gttaatgtagctaaccttataacttgtacatcgactttaaaaggagacaacttacagaat
ctaaggttaactttgtcaaaattaggagggatattaaagagtgattgggatgacacttgt
tgttacctaacaatgccaggaatcaccttgactatcaaagttgtgttagctctagtacaa
ggttcaaacatagtaactacagagttctggaacaaatgccttgaaaatgtttccaattgt
gaaaccctaccagatcctcaagattttgtacccgaggttatggaatctacacttaataag
gaggttgtgtcattccagcctgataatcgtcgtagttcaatattcacaggcaagaagttt
atatttttttcaagaagacagcatgaaatgtataagactgtactggtcaaaagtggggcc
actccaatgctgcttagtgaatgcagaatgacaatatcaatgctctgtagcccagatgtg
gttgttatacagtatacatcaactggtgtcagtcaagagacacagtcacagagaagccaa
atgactgacattgtcaatcaattaaaaaataagggcaaaagagtggtagctgatgctgag
ataggtcttgctatattattctgctcatccaataagtattgcaatcctaacttcagcttt
tcatctgaagtggttaagcagatatctgctcctcaaaagagttcaaaagtactagcacag
gaatctcaagaacctacatcacagcaaaagcagcccaatgttaaaataaatgaaagtctt
gtgtctgaagatggttatgataaactttctgttaaaagaaagttgagtgatgtcataact
gagatagaagtcaatcccagcaagagaattgcaacatgttttgtagcagaagtgaaggtt
gaaagtgccaaaaggggttaccccgatgacaatgatgaattctcaaaaccacccaagaaa
atggctatagaaaatgagaagaatagctctgaacaagctagtaatgatgatagtaacatg
tttaattttgtgaaagctcctaccaccactgaatctgagaaaaaacctaaaaaactcaat
ttatcaaaaccacagaaaagaaaactaaatgataatcagcctgaaggcaatctatttaac
tttatacaaactgatgaagatgatgttaatgctagcacagtatctaaacaaagccttttt
aataatgataaaaataagaaagatgatagtgaaaatgtggtacaaacaacaaatctatca
aaacaagaagtttcagctcaagatatatctgctatgagaggatccaagctaaaagaatta
atgcaacgtaatttatcaagcaattctagtccagtcaataatacaaggagaataaaaact
gaagacttagaagataaaatgaataagctagacttgtgtaacactattgttactacctgt
agcaccttaattaagagggaaccatacaaatatgagactgagaatacattttctagtaat
gttaaaaactttaagaaattcaagaaagtttggccaataaagagacaatcttctgtgata
cagacatcttcaatgagcttgataacttcataa
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