Trichoplusia ni (cabbage looper): 113492316
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Entry
113492316 CDS
T05757
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113492316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492316
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
113492316
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GFIT
Motif
Pfam:
Ku
Ku_PK_bind
DLH
Motif
Other DBs
NCBI-GeneID:
113492316
NCBI-ProteinID:
XP_026725608
UniProt:
A0A7E5VBF0
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Position
1:22303478..22305426
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AA seq
534 aa
AA seq
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MTNFKRKTSFDPDNLEEVLNGFKEEGYEVFVVGPDIYSKENDSEDTALARQFVEATDGAT
STLDSIMKHELLFHRKKIVNASPWNVDLSIGPNIKIPVSTFIKLRDEPVVKTWKKAVKDP
VTSTASTFEAVEKRKEYINPENQSTVKIQDKIQGYHYGQTIIPFTDLDKTMLYQPGEKCL
SVYGFTHADNISWQNLTGDGLSYVFARKGDKNAQKAIRCLVECLHELNLVGIVRKVHNNN
NAPKMFALMPVIDTNNYVCLSMIALSYKEEIKQMSFPATNLKKYSCTPEQVNAFKDLINA
MDLTQAYDDTYDDKEAFPIAECISPAAQYVLDCIAFRALNPGKPLPKPREEVMSLFQVPP
LLEENARKPIEKIKSLFTLNKVEVKKRKNKNVVLDIDQIQAPLGDFQPDTTDIPNMPKVQ
LPINENEVDNIHKISTINPVEDFKVLQGKNKPLSELAPGMIKAIESLIYNNIDGNYTKAL
DAMKHLRSEFLKSDPKDYNDWMRKFKSDLAKCDNNQVLCLIMEKQVSFYTEGRK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgactaattttaaaaggaagacctcatttgatcctgataatcttgaagaggtcttgaat
ggtttcaaagaagagggctatgaagtttttgtagttggtccagacatatactccaaggag
aatgacagtgaagatactgctctagccagacagtttgtggaggctacagatggtgcaaca
tcaacactagacagcatcatgaagcatgaactactcttccacagaaagaaaattgtcaat
gcctcaccttggaatgtagacctaagtattggcccaaacataaaaatccctgtatctaca
ttcatcaaactcagagatgaaccggttgtcaaaacttggaaaaaagctgtcaaagatccc
gttacatctacagccagcacatttgaagcagtggaaaaaagaaaagaatacattaatcca
gaaaaccaaagtactgttaagattcaggataaaatccaaggctatcactatggccaaacc
atcataccttttactgacttggataaaacaatgctgtaccagcccggagagaaatgcctg
tctgtgtatggtttcactcatgctgataatatcagttggcagaatttaactggtgatggt
ctgtcttatgtatttgccaggaaaggtgataagaatgcacagaaagctatcagatgcctt
gtggaatgcctgcatgaactaaatcttgttgggattgttagaaaagttcacaacaataat
aatgcacccaaaatgtttgcattaatgcctgttattgatacaaataattatgtctgtctc
tcaatgattgctttgagttacaaggaggagataaagcaaatgtcattcccagcaaccaat
ttaaaaaagtattcttgcacccccgaacaagtcaatgcttttaaagatttaattaatgcc
atggacttgacgcaggcttatgatgacacatatgatgataaggaagctttccctatagct
gagtgtatcagccctgcagcccagtatgtgctagattgcatagcattccgagcattaaat
cctggtaaacccttacctaaaccaagagaggaagtcatgagtctcttccaagtgcctccc
ttgctagaagagaatgcacgaaaacctatagagaaaattaagagtttattcacattaaac
aaagtagaagtgaagaagaggaaaaacaagaatgttgtcttggatattgatcagattcaa
gcaccacttggtgacttccaaccagataccacagacattccaaacatgccgaaagttcaa
ttgcctattaatgagaatgaagttgacaacattcacaaaataagtaccattaatcctgtt
gaagacttcaaagtgcttcaaggcaagaataaacctttgtccgagttggctccaggaatg
ataaaagcaattgaaagtttgatttacaataatattgatggaaactatactaaagcatta
gatgctatgaaacatttgagatctgaatttcttaagtctgaccctaaagactacaatgat
tggatgcgtaaatttaaatcagatttggctaaatgtgataacaaccaagtattatgtttg
attatggagaagcaagtcagtttttatactgaaggaagaaaatag
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