Trichoplusia ni (cabbage looper): 113492379
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Entry
113492379 CDS
T05757
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113492379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113492379
03032 DNA replication proteins [BR:
tnl03032
]
113492379
Spliceosome [BR:
tnl03041
]
Complex A
U1 snRNP components
Sm proteins
113492379
U2 snRNP components
113492379
Complex B
U1 snRNP components
113492379
U4/U6.U5 tri-snRNP components
113492379
Complex C
U2 snRNP components
113492379
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113492379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Gemin7
IDH
Motif
Other DBs
NCBI-GeneID:
113492379
NCBI-ProteinID:
XP_026725662
UniProt:
A0A7E5VBJ7
LinkDB
All DBs
Position
3:20516020..20516926
Genome browser
AA seq
127 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNKEELQLETLSI
RGNNIRYYLLPDSLPLETLLIDDTPKGRGKREGFPRGGGGARGGRGRGRGGRGGPRGGRG
GRGRGRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagtaaggtttttaatgaagctcagtcatgaaacagtgacaattgaattgaaa
aatggaagtgttgtacacggaacaattacaggagttgatgtcgcgatgaacacacatttg
aaagcggtaaaagtaacgctgaaaaacaaggaagaactgcaactagaaactttaagtatt
cgtggaaacaacatcagatattacctgctaccagacagtttgcctttggagacgttgttg
attgacgatacaccgaagggccgcggaaagagagaaggtttccctagaggcggaggtggc
gcgcgaggaggccgaggtagaggtcgcggcggccgaggaggaccccgcggcggccgcgga
ggccgggggcgcgggcgccgctaa
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