Trichoplusia ni (cabbage looper): 113492382
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Entry
113492382 CDS
T05757
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113492382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113492382
04121 Ubiquitin system [BR:
tnl04121
]
113492382
03036 Chromosome and associated proteins [BR:
tnl03036
]
113492382
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492382
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113492382
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113492382
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113492382
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113492382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
BRCT
BRCT_2
ANK_LRRK2
RSS_P20
ATG1-like_MIT2
Phage_spike_2
Motif
Other DBs
NCBI-GeneID:
113492382
NCBI-ProteinID:
XP_026725666
UniProt:
A0A7E5VBK3
LinkDB
All DBs
Position
3:20548040..20553567
Genome browser
AA seq
513 aa
AA seq
DB search
MSSEDLNNFIKALDTVKKDYTCGVCGDLCKDPVVLKKCFHILCAEHTPLDNCPNCKIPLD
ECGTFIDDQLKVCIHSTAELDKMFEKYRSKETTITSSNKTKKVPAKNVVGSGSKIPLSDK
TNSRQQFNETLQSNVSLKTNVNNEKRNKKGETALHVACRLGNIEKVQELINLGANTNTKD
NAGWTPLHEAVQNGRLDLVTLLLQHNTLIDVPGQGNETPLHEAVRYNFIDIAEELIKNGA
DMNVRNCKGETPYQLASVNMKNLLREAAEKVMYTQSFNISHIAALYAELEFDDIHIYCSS
SFRTVHNKLRALSKHHSNIHLEVKLTKKVTHLVVDTEDGVCVSSLDVLQGIVSNIWIISA
DWVTKSSEEKLESFEQYEVKGVGTKSYNGPKNARYNKYKQLPGIFNGCHFYLHNFNTKYK
VSNTLVLTKAILTKLITDAGGIVLRRVPNPESIPDSEQLVPYHAKKDGRLVDCSHYIIFQ
EMYEPMYNMKHLKALPMGWLIECLEKYELCEPW
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagaagacttgaataactttataaaggcgttagacacagtgaaaaaggattac
acgtgcggcgtgtgcggggatctgtgtaaggatcccgtagtcttgaaaaaatgttttcat
atactttgtgctgaacatactcctttggacaactgtccaaattgcaaaatacctttggat
gagtgcggcacgttcatcgacgaccaacttaaagtgtgtatccactccactgccgaacta
gacaaaatgtttgagaagtatcgctcaaaggaaactacgataacatctagtaataaaact
aagaaagttcccgctaagaatgttgtcggatctggctctaagatacctctgtctgacaaa
accaactcccgccaacagtttaatgagacccttcaatcaaatgtaagtttaaaaaccaat
gtgaataatgagaaacgtaataaaaaaggcgagaccgccctccatgtcgcgtgccgcctc
ggcaatatcgagaaagtacaggagctgataaacttgggagctaacaccaatactaaggat
aacgcaggctggacaccactgcacgaagcggtgcagaatggaagactcgacctcgtcaca
ttgctcctacagcacaacacattgatagatgttcccggtcagggcaacgagactccctta
cacgaagctgtccgctacaactttatagatattgccgaagagttgatcaagaatggtgca
gatatgaatgtcagaaactgtaaaggagaaactccataccaactggcttctgttaatatg
aagaatttgttacgtgaagcagctgaaaaggtgatgtatacgcagagcttcaacatctct
cacattgccgcattatatgctgagttagagtttgatgacatacacatttactgctcatca
tcattccgtactgtgcataacaagttacgagctttaagtaaacatcatagtaacattcat
ttagaagtcaagcttacgaagaaggtcactcaccttgttgtggatactgaggatggtgtc
tgtgtatcaagtctcgatgttcttcagggtattgtgagcaacatttggatcatcagtgca
gactgggtaacgaaatcctccgaagagaaactagagtcatttgaacagtatgaggtgaag
ggagttggaaccaagtcctataacggacctaaaaatgcccgatacaacaagtacaaacaa
ctgccaggcattttcaatggctgtcacttctatttacacaatttcaatactaaatataaa
gtttctaatacgttagtcttaactaaagctatattgactaagttgatcactgatgctggt
gggatagtgttacgcagagttcccaaccctgaatctatccccgatagtgagcagttggta
ccgtaccacgcaaagaaagacggcaggctggttgactgttcacactacattattttccag
gagatgtatgaaccaatgtacaacatgaagcatttgaaagctttaccgatgggctggttg
atagagtgcttggagaagtacgaattatgtgaaccatggtga
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