KEGG   Trichoplusia ni (cabbage looper): 113492485
Entry
113492485         CDS       T05757                                 
Name
(RefSeq) nucleolysin TIAR
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
tnl  Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113492485
   03041 Spliceosome [BR:tnl03041]
    113492485
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     113492485
Spliceosome [BR:tnl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    113492485
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_7 RRM_3 RRM_Nup35 RRM_PARP14_3 RRM_MARF1 Calcipressin
Other DBs
NCBI-GeneID: 113492485
NCBI-ProteinID: XP_026725757
UniProt: A0A7E5VBU0
LinkDB
Position
4:1788764..1797259
AA seq 388 aa
MGDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAA
TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFG
EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKP
NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQTTFSQFGQIQDIRVF
RDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKENGGGDSQSTNNATAAPPAMG
AQTQYPYPYQQGMGYWYAQGYPTLQGYMAPGYYQQYATAYSNPQAAAAAGYRMSMPGGGG
AGAGGGWGGGPQPLMYASPMPSAQYPSQ
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgggcgacgaaagccatcctaaaactctctacgtcggtaatttggacgcgagtgttaca
gaagtattcatatgtacgttgttcggacaaataggcgaagtaaaaggttgtaagataatc
cgcgagcctggtaatgatccctatgcctttcttgagtttacaagtcacacggcggcagct
acagctctggccgccatgaacaagcgagtggtcctcgacaaggaaatgaaggttaactgg
gctacgagtcctggcaatcagccgaagactgataccagcaaccatcatcacatatttgtg
ggtgatttatcaccagaaattgaaacgcacatattgcgagaggcatttgcgccattcggt
gaaatttcgaattgtcggatagtccgcgacccacaaacgctcaaatctaaagggtacgct
ttcgtgtccttcgtaaagaaggctgatgcggaggctgctatacaggcaatgaacgggcaa
tggttgggctcgcgctccatacgtacgaactggtcgacacgcaagccgccgtcaaagccc
aatgaaggtgcaccgagcagcaagcgagcgaaacagccgacattcgacgaggtgtacaat
cagagctcaccaacgaacacgacggtatactgtgggggattcactagcaatgttattact
gaagagttgatgcagaccacattctcacagtttggccagatacaggatatccgagtgttc
agggataaaggttatgccttcattaggtttacaactaaggaagcagcagcacatgctatt
gaagcgacacacaacacagaaattagtgggcacatagtcaaatgtttctggggaaaagag
aacggaggcggtgacagtcagagtacgaacaacgcgacggcagcgccgccagcgatgggt
gcgcaaacgcagtacccttacccgtaccaacaaggaatgggatattggtatgctcagggc
taccctacgttacaaggatatatggcgcccggctattatcagcagtacgccacagcatat
agcaacccgcaggctgcggcggcagccggctaccgcatgagcatgccgggcggcggcggc
gcgggcgcgggcggcggctggggcggcgggccgcagccgctgatgtacgcgtcgccgatg
ccgtcggcgcagtacccctcgcagtag

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