Trichoplusia ni (cabbage looper): 113492485
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Entry
113492485 CDS
T05757
Name
(RefSeq) nucleolysin TIAR
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113492485
03041 Spliceosome [BR:
tnl03041
]
113492485
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113492485
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113492485
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
RRM_Nup35
RRM_PARP14_3
RRM_MARF1
Calcipressin
Motif
Other DBs
NCBI-GeneID:
113492485
NCBI-ProteinID:
XP_026725757
UniProt:
A0A7E5VBU0
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Position
4:1788764..1797259
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AA seq
388 aa
AA seq
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MGDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAA
TALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFG
EISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKP
NEGAPSSKRAKQPTFDEVYNQSSPTNTTVYCGGFTSNVITEELMQTTFSQFGQIQDIRVF
RDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKENGGGDSQSTNNATAAPPAMG
AQTQYPYPYQQGMGYWYAQGYPTLQGYMAPGYYQQYATAYSNPQAAAAAGYRMSMPGGGG
AGAGGGWGGGPQPLMYASPMPSAQYPSQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgaaagccatcctaaaactctctacgtcggtaatttggacgcgagtgttaca
gaagtattcatatgtacgttgttcggacaaataggcgaagtaaaaggttgtaagataatc
cgcgagcctggtaatgatccctatgcctttcttgagtttacaagtcacacggcggcagct
acagctctggccgccatgaacaagcgagtggtcctcgacaaggaaatgaaggttaactgg
gctacgagtcctggcaatcagccgaagactgataccagcaaccatcatcacatatttgtg
ggtgatttatcaccagaaattgaaacgcacatattgcgagaggcatttgcgccattcggt
gaaatttcgaattgtcggatagtccgcgacccacaaacgctcaaatctaaagggtacgct
ttcgtgtccttcgtaaagaaggctgatgcggaggctgctatacaggcaatgaacgggcaa
tggttgggctcgcgctccatacgtacgaactggtcgacacgcaagccgccgtcaaagccc
aatgaaggtgcaccgagcagcaagcgagcgaaacagccgacattcgacgaggtgtacaat
cagagctcaccaacgaacacgacggtatactgtgggggattcactagcaatgttattact
gaagagttgatgcagaccacattctcacagtttggccagatacaggatatccgagtgttc
agggataaaggttatgccttcattaggtttacaactaaggaagcagcagcacatgctatt
gaagcgacacacaacacagaaattagtgggcacatagtcaaatgtttctggggaaaagag
aacggaggcggtgacagtcagagtacgaacaacgcgacggcagcgccgccagcgatgggt
gcgcaaacgcagtacccttacccgtaccaacaaggaatgggatattggtatgctcagggc
taccctacgttacaaggatatatggcgcccggctattatcagcagtacgccacagcatat
agcaacccgcaggctgcggcggcagccggctaccgcatgagcatgccgggcggcggcggc
gcgggcgcgggcggcggctggggcggcgggccgcagccgctgatgtacgcgtcgccgatg
ccgtcggcgcagtacccctcgcagtag
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