Trichoplusia ni (cabbage looper): 113492598
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Entry
113492598 CDS
T05757
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
113492598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tnl04040
]
113492598
Ion channels [BR:
tnl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113492598
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
6TM_PilS
DUF6350
Motif
Other DBs
NCBI-GeneID:
113492598
NCBI-ProteinID:
XP_026725922
UniProt:
A0A7E5VCB3
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Position
4:4005870..4015834
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AA seq
886 aa
AA seq
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MSRVDKSVKSHDSQKTDSIENQKLPSIPAFEDKLSRLPSTTKDAKYMSSSKETINLRDQE
QMPTLMRPPDVNKYYAQRKAYSVPKVNHHGPYPNTRTMSHCYNLLYDKTSVPYIRKSKNE
VGNKSRRKSKSYDKLETSSYDNIEISSNDRIHLPKLQAHETDFLALVSEDDVDAVKTYVA
SHPDLNLNCINFQGVSALHIAVQNRSVAMVEFLLTHPNIEIGDNVLHAIHYNSIKILEML
LNAQSKISPGLEFAGTTHSTDYPAHVTPLILAAQMGHYELVSLLIDRGHCIARPHVPNCR
CIACKNSLVNEDPLHASSARLSVYRAIASPAYLVHVSSDPILTAFRLTAELADNAAAYRH
IAGAYLQLSDDVSAFAVDLIGCCRTSEEVEFILKQKSGCRGRRHFVLPRLLMAVDYRQKE
FVAHPNTQQVLESYWLGDWHNWRSKYTRTKAMIILYRVFITPIILIVCMVAPRHRLVRHW
QIPLNKLITHVAAYFVFLALVFYISNQDKSLQKRGPPNTGAEAPIILYVCGYTWSALRMI
VMQGPHRYFSKMWNWAEIIMLTMFGLTFVFWVAAAIDIAIRDQEDLDRKYWRQYDPTLLA
EGTFCLATIFAFFRLMFLCQLNYHLGPLQVSLGKMTIDIYKYIIVFAIIISAFAAGLARF
YQYYDGMVYEDEFGMKTVQVSSFTSLSDTLNTLFWALFCMAPLESADVVLENTRELRNVD
KMRDNRHAYTERIGYFCFGCFEVISVIVVLNMLIATMSNTFQRVNDNVDIEWTFGKTEVY
IDYMLQTTLPSPFNLIPTASGMGNVVEWFCTKIKRPPGVYARWSPYYCCYIERDVEASVL
REYPALMSVLVQRYFRDKDSSQIIACKLENELTAMRRNLDAVKISR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagtagataaatctgtcaagtctcacgattcacaaaaaactgattctatagag
aatcaaaaactaccaagtataccggcatttgaagataaacttagcagattgccatccacg
actaaagatgctaaatacatgagctcaagcaaagagaccattaatcttagggatcaagaa
caaatgccgacgttaatgagacctccagatgtaaacaaatattacgctcagaggaaggcg
tactctgtcccaaaggttaaccatcatgggccgtacccgaatactcggactatgagtcat
tgctacaacttactgtatgacaaaaccagtgttccttatattcgcaaatcaaaaaatgaa
gttggaaataaatcaagacgtaaatcaaagtcttatgataagctggaaacgtcgagttat
gataacattgaaattagttcaaacgaccgcatacacttaccgaagttacaagctcatgaa
acggattttttggctcttgtttctgaagatgacgtcgacgccgtcaaaacctatgtagca
agtcaccctgacctcaatttaaattgcattaatttccagggggtatcagctctccacatc
gccgtacaaaacagatccgtggcaatggttgaatttctcttgactcacccaaatatagaa
attggtgacaacgtgttgcatgccatccactataacagcataaaaatattggagatgttg
ttgaacgctcagtcgaagatctcgccgggattagagttcgcggggaccacgcactcgact
gattacccagctcacgtcacgccactcatcctcgccgctcagatgggccattacgaactc
gtctcgctgctgatcgaccgcggacactgcattgcccgacctcatgtgccgaactgtcgt
tgtattgcttgcaaaaattctttggtaaacgaggatcccctgcacgcgagcagcgcgcgg
ctgtcggtgtaccgcgccatcgcctcgccggcgtacctggtgcacgtctcatcggaccct
atcttgaccgcgttccggctcactgcggagctggcagacaacgccgccgcgtacaggcac
atagccggggcatatctccagctatccgatgacgtcagcgccttcgccgttgaccttata
ggatgttgtcgcacctccgaagaagtggaatttatattgaagcaaaaatcaggttgtaga
ggtcgtcggcacttcgtattacctagattgctcatggcggtggactataggcaaaaggaa
tttgtcgcacatccaaacacacagcaggttctcgaatcctattggctaggcgactggcat
aattggagaagcaaatatacacgaacaaaagctatgatcattctataccgagtgttcatt
actccgattattcttattgtatgcatggtagcgcctcgtcatcgcctcgtaagacactgg
cagataccgttgaacaaactgattactcacgtggctgcatacttcgtatttcttgccctg
gtcttctacatatctaatcaagataaatctctgcagaaacgaggacctccaaacacaggt
gctgaagccccaataatactgtatgtttgtgggtacacgtggtcagctctccgcatgatc
gtgatgcagggtcctcatcgatacttcagtaagatgtggaactgggccgaaatcataatg
ctcacgatgttcggcctgaccttcgtgttctgggtcgcagcagctatcgatatagccatc
cgtgatcaggaagatttagaccgcaaatactggcgacagtacgatccaactttattagcc
gagggcacgttctgcctcgccactatattcgctttcttccgacttatgttcctatgccag
ttgaactaccatctagggccactacaggtatcattaggaaaaatgacgatcgatatttac
aaatacatcatagtatttgcaattattataagtgcgttcgccgcaggcctcgctcgcttc
taccaatattatgacggaatggtatacgaggatgaatttggaatgaagaccgtgcaggtg
tcttcattcacaagcttatcagacactttgaacacgttattctgggcattgttttgtatg
gcgcctttggagagtgcagatgtggtcttggaaaacacaagagaattgaggaacgttgac
aaaatgcgtgacaacagacacgcatacacggagcgcatcggatacttttgtttcggatgt
tttgaagtaatatctgttatagttgtattgaacatgctcattgcgaccatgtctaatact
tttcagcgcgttaatgataatgtggacatagaatggacgtttgggaaaacagaggtgtac
atagactacatgcttcagacaactttgccgtcgccctttaacctgataccaacagcctct
gggatgggtaacgtcgtggagtggttctgtactaagatcaagagacctcccggggtgtac
gcccgctggtccccgtattactgttgttacatcgaacgtgacgtggaagctagtgtcctc
agagagtatccagcactgatgtcggtcctcgtgcagcgatacttcagagataaggattcc
tcacagataatagcatgcaagctagaaaacgaactgacagctatgcggagaaatcttgat
gctgttaagatatcgcgataa
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