Trichoplusia ni (cabbage looper): 113492706
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Entry
113492706 CDS
T05757
Name
(RefSeq) flap endonuclease GEN isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492706
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113492706
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
XPG_I_2
Chromo_SEND1
Surface_Ag_2
Motif
Other DBs
NCBI-GeneID:
113492706
NCBI-ProteinID:
XP_026726111
UniProt:
A0A7E5VCV3
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Position
4:complement(6261581..6266547)
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AA seq
745 aa
AA seq
DB search
MGIKGLWTVLTPYSEKKSLHEVRGETLAVDLSGWICDSQNVTEYYIQPKLYLRNLFFRTV
YLILADIKPIFVLEGDAPELKRDVMAARNALQFKGAAPRSETAVSNKKPDVARKRFKNVL
KECETLLKTLGVRCVKGHGEAEATCAHLNEQGLVDAVVSQDSDCFAYGARRVYRNFSVSN
SAGGGALQGSVDCYDAEIMYKSNGFGRNKMVALALLCGCDYGIGACGSSITTAVSFLHSI
PEKDVVPRLLSWVTNPQHFEEKNRWLNVPGRCDRCGHSGRTHGRHGCPVCVTNRGCDDTG
HKTKVAEVKRELSLRQRALTCGAPFPEPKVMKEFMHTPPQKIDVDRLKFPTPSLIKFMKL
MTNKLDWSERYCVEKFLPLLTKWHLQDDVPSRTIQATLIKKKRNPRGVPSYEVVWADING
QYEGLIPDNQFEEDEDPSVAWTTTERQDLMRKYYPQIVDAYEESIKKPPKEKKTRTRKKK
ENDNPDSETKPKRKYNRKPKNMKFTEQSNTTKTGSEHKDPNTSILNVSVPVNKLKRKIKN
NTKKQKTLHSFIASKKRRTSKKSMQILRQSLRKMSINCDDYPDLAPITSDSRFSNDVNDD
KENKGINKHCLSLLNSSDDEDVSDISDIINKIVTRSPKTKTAKVDNCLVRLVFEKYSTPK
KKSLRKSILNQVHNNCSTPNDSPIRKSKFRISNNFNNSVISKVNTSYFFDKLTDAGDAFE
MSLEHKGPVTHLDSTVEYSLPDICL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggaattaagggcctttggactgtgttgacaccttacagtgagaaaaaatcattacac
gaagtacgaggagaaaccctcgctgttgatttatcaggatggatttgcgacagtcagaat
gtgaccgaatattatattcaacccaaattgtatttaaggaatctattctttagaaccgtg
tacttgatattggctgacattaagccaatattcgtacttgaaggagacgcaccagagctg
aaaagagatgtcatggctgcccgcaatgccttgcagttcaaaggtgctgcacctaggtcc
gaaacagcagttagcaacaaaaaacctgatgttgccaggaagagattcaaaaatgtttta
aaagaatgtgaaacacttctgaagacattaggagtccgatgtgttaaaggacatggagaa
gcagaggccacatgtgctcacctgaatgaacaaggtttggttgacgcagtagtgtctcag
gattcggattgctttgcgtatggtgcgcggcgagtgtaccgcaacttcagcgtgtctaac
tctgcaggcggcggcgctctgcaaggctctgtggactgttacgatgccgaaattatgtac
aaaagcaatggttttggtcgcaacaagatggtggctctcgccttgctgtgtgggtgtgac
tatggtattggagcatgtgggtcgtctataaccacagctgtgtcattcttgcatagtatt
ccagaaaaggatgttgtacctaggttattgtcatgggtgacaaatccacagcactttgaa
gaaaaaaaccggtggctgaatgtgcccgggcgttgcgaccgctgcggacactccggccgc
acgcacggccgacacggctgccccgtctgtgtcactaatcgtggctgcgatgatactgga
cataaaacgaaggtagcagaagtgaagcgagaactatctctccgtcagcgagcgttgacc
tgcggcgcaccgtttccggagcccaaagttatgaaagagtttatgcacacgccgccgcag
aagatagacgtcgatagactaaagtttcccaccccaagtttgataaaatttatgaaactt
atgacgaacaagttggattggtcagagagatattgtgtggagaagttcctaccattgctg
acaaagtggcacctacaagatgatgtaccgagcaggaccatccaggcaacattgataaag
aagaaacgaaaccccagaggtgtcccaagttacgaagtcgtatgggccgatatcaacggc
caatatgaaggactcatcccagataatcagtttgaagaagacgaggatccatcagttgct
tggacaacaactgaaagacaagatttaatgcggaaatactacccgcaaatagtagacgct
tacgaagaatccatcaagaaaccaccgaaagaaaagaagaccaggacacgaaaaaagaaa
gaaaacgataacccagatagtgaaacaaaacctaaaagaaaatataatagaaaacctaaa
aatatgaagttcacagaacaatcaaatacgacaaaaacaggttcagaacataaagacccc
aacactagtattctaaatgtcagtgtaccagttaataaactaaagaggaaaattaaaaac
aatactaagaaacaaaagactctacacagtttcatagcaagcaaaaagagaaggactagc
aagaaatcaatgcagattttgaggcaaagcttaagaaaaatgtctattaattgcgatgat
tacccagaccttgcgcctattaccagtgatagtagattttccaatgatgtgaatgatgat
aaagaaaacaaaggtataaataaacattgtttaagcttactaaacagttctgatgatgaa
gatgttagtgacatatcggatattatcaataaaatagtaacaagatctcctaaaacgaag
accgcgaaagttgataattgtttagtacgacttgtcttcgaaaagtactcgacgccaaaa
aagaaatctttgaggaaatctatactgaatcaggtacataataactgttcaacacccaat
gatagtccaattagaaagagtaaatttagaataagtaataatttcaataattctgttatc
agtaaagtgaatactagttatttctttgataagcttacggacgccggagatgcctttgaa
atgtctttagaacataagggacccgttacgcacttagattcgacggtagagtatagtctg
cccgatatttgtttgtaa
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