Trichoplusia ni (cabbage looper): 113492730
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Entry
113492730 CDS
T05757
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113492730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113492730
03036 Chromosome and associated proteins [BR:
tnl03036
]
113492730
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113492730
Coactivators
SAGA/TFTC/STAGA complex
113492730
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113492730
STAGA complex
113492730
TFTC complex
113492730
SAGA complex
113492730
SLIK complex
113492730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
113492730
NCBI-ProteinID:
XP_026726158
UniProt:
A0A7E5VCY3
LinkDB
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Position
4:complement(6537999..6545967)
Genome browser
AA seq
625 aa
AA seq
DB search
MGDSEFAYGSSMSVDSMKVIAESIGIASLGDDAAKELADDVTFRLKVIVQDSLKFMHHSK
RQKLSTTDIDHALRVKNIECQYGFIQPDSLPFRFASGGGRELHFVEEKEVDLTEILYAPP
PKIPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPISKLSKPTNKDAAGKPMC
GKAARLKASESVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEALQSLACDPGLHE
MLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVSTCIVS
RQLCLRPEMDNHWALRDFAARLMAQICKTFNTSTNNLQTRVTRLFARALQCPSQTNNETG
VGPSMVTTMKESEKTPLASLYGAVQGLAELGPEVIKVFILPRVRWLGERVEGALSGLGGA
DRLAAGNLKHQLLKVLAPVVRQLRQPPDLPDEYKRDYGYLGPSLQHAVGKIRTSPPHVSH
LSHVTHTPKTVDTIASRSMVISASPAPQSPAPSTPPPQKFVIVSQQKAPQTQPASGAGHI
VVHSSQPTIVRSQNVQSVVVTSGPASGAAPAQKVVVVGVQPPHHHAPPAPALVSQAPVSV
VAKPVFARGGTPQQPPELDDLSHLA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcagagtttgcgtatggatcgtctatgtcagtagattctatgaaagtaata
gcggaaagcattggaattgcaagtttgggagatgatgctgcaaaggaattagcagacgat
gtaacttttcggttaaaagtaatcgttcaggatagtttgaagtttatgcatcactccaag
aggcagaaattgtctactactgatatagatcatgcactgagagttaagaatattgagtgt
caatatggctttatccaaccggattcattaccattcagatttgcatctggtggtggtagg
gaactccattttgtagaagaaaaagaagtggatttgacagaaatattgtatgcccctccg
ccaaagataccgctggatgtgtctgtccgagcacattggttgagtgtagatggagtgcag
cccacagtcccagagaaccctccaccactctctaaagaagctcagaaactggaatcagtt
gaccctatcagtaaactgagcaagccaactaataaggatgcagcaggtaaaccgatgtgt
ggtaaagcagctcgtttgaaagcgtcggagtctgtgcacgtgaagcagctggcgacgcac
gagctgagtgtcgagcaacagttgtattacaaggagatcaccgaggcgtgcgtcggcagc
gatgagggacgccgcgcggaagcgctacagtctcttgcctgcgatccgggactacacgaa
atgttgccgagaatgtgcacgttcatatcggaaggagtcaaagtcaacgtggtacagaac
aacctcgctctgctcatatacttgatgcgaatggtcaaggcgctactcgacaatcagtcc
ttgtatttagaaaaatatttacacgagttgatcccgtcggtgtcgacgtgcatagtatcg
cggcagctgtgtctgcgccccgagatggacaaccactgggcgctgagggactttgctgcc
cgactgatggcgcaaatatgcaaaacattcaacacatccacaaataacctacagaccaga
gttactaggttatttgctagagctctgcagtgtccatcgcagaccaacaacgagactggg
gtgggaccatcaatggtaaccacgatgaaagaatccgagaaaacgccattagcgtctctg
tatggcgcggttcaaggcttggcggaattgggaccagaagttattaaagtgttcatactg
ccgcgcgtgcggtggctgggcgagcgtgtggagggcgcgctgagcgggctgggcggcgcc
gaccggctcgcggccggcaacctcaagcaccagctgctcaaggtactggcgcccgtcgtg
cgccagctgcgccagccgccagacctgcccgacgagtacaagcgtgactacgggtacttg
ggcccgagcctgcagcacgcggtgggcaagatccgcacgtcgccgccgcacgtctcgcac
ctctcgcacgtcacgcacacgcccaagactgtcgatacgatagccagccgtagcatggtg
ataagcgcatcaccagcgccacagtcgccagcgccgtccacaccgccgccgcaaaagttc
gtaatagtatcgcaacagaaagctcctcagacgcagcctgccagtggtgcaggccacata
gtcgttcatagctcacagccgactatcgtccggagtcagaatgttcagtcggtggtggtg
actagcgggccggcgagcggcgcggcgcccgcgcagaaggtggtggtggtgggtgtgcag
ccgccgcaccaccacgcgccgcccgcgcccgcactcgtcagccaggctcccgtttcggtg
gtagcgaagccggtgttcgctcgaggcgggaccccgcaacaacccccggagttggacgac
ctgtcccacctggcctga
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