Trichoplusia ni (cabbage looper): 113492783
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Entry
113492783 CDS
T05757
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113492783
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
113492783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
Motif
Other DBs
NCBI-GeneID:
113492783
NCBI-ProteinID:
XP_026726261
UniProt:
A0A7E5VDB2
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Position
4:complement(7025460..7049295)
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AA seq
2440 aa
AA seq
DB search
MGIMYEKRPLKRPRLGPPDVYPQEPRQKEDELTSTNVKHGFSTTPQSSDEFGTARNFNYS
ASKIGQFFSSILSKKEELNTLPDCGRKRQQVNPKDNFWPATARTKAQIEAWFKDLAGSKP
LSQLAKKAPNFNKKEEIFITLTEYQVAMPRAAWFIKLSSAYTVAVSEAKIKKRQLPDPTT
EWTTTLIKFLKDQIPKLAEHYQSAVPGNVPDKTPPSQSGQGTPSHNSSGNPPGSSTPNST
VSNSMHSPGNSSTLGSSTPSSSDSTDWRQALKLWNYCCRLAKYLLDEGLLDRHDFLTWII
ELLDKRAPDDGLLRLFLPLALQHMGEFVCCESLSRRLATSCAKKAAAICSVLSETTLRTL
NQPAVFTKVAERTTETNGTPMSPAPETNADVKPNIAQIKREPTPVENQGTPNPNHSLGTP
NPTHSLGTPNPNHSLGTPNPQQPMDVQVKEERGASPARETKPTMPAVVAAAMNPVQVGFG
EILNCAYHRDVIIQLATVLQLICIECPTAMVWSGCGSSLQGSPLDLLPLPPSALPMPHMD
TAATEEHRKMVYEAEQEISARSKKAESKWCTDKWQTSSQARVLAVLEALDRHCFDRVDPN
NNLDTLYKEVFANCPPPSKENTDTKDPEWACPYSVVRVICEWAVCGARWGEHRAQAAAAL
LDRRQHHTLHHHHEHHATGMYHAEETTPLKRSDDKESVSSGAGLYNGPPIFQNLLLRFLD
SDAPVLDESPNAPPGNRQQFANLVHLFGELIRRDVFSHDAYMCTLISRGDLISPTEPTST
GGSAHTVAPPANSTGTNHNMDDDIFAGIDLKPKMEENVRMDLDDSKIDDDLDKLLQHIKE
DQQNSMDAPDSPKDPGEPSHSVNSPMMVPSGMSIPGIPSMSMGPMSVPGIRTTSSGPSSG
CGGPSPGAVSRHYHYTQHFPLPPAEPDHTPHDANQRHILLYGVGRARDEAKHAVKKMTKE
ICKLFSKKFSIDVAEGGKIKKHSRSEFNFEAVTQKFQAMSMYEQGAVSWAVGSAVCESLA
AYAAGATTYLPQPEHVAFALDLMEIALNVHGLIETCIQILKELSEVESALISRGAPSSGL
AAPRAYTSALALYTVGALRKYHSSLLLCVEQTSAVFEQLCRLVKCVVNPGDCGSAERCVL
AQLHDLYKAAAHLCHAPHADTFANAYPKIKQALYSPLQPTPSNYPYNPQFLSEFFTNPRK
GKIEIAWARQVAESPANRYSFVCSAMLAVCREVDNDRVNELGVVCAEMTAWCSGLAAEWL
GALVALCGAQHYPASAPHAAPPPLYPDLLLHRDLHDAAAHDALAVFTCILVARHCFSLED
FVRHAALPSLLKACGGGGSGNAPNAPSPDTGARLTCHLLLRLFKTVDTPQPGLYSVSTSP
GPGGAAAGVRLSCDRHLLAAAHKNIGVGPVLATLKAILMVGDSTARDGGKPGGKKSCELS
HILGTSDTVPTDTALDLMSMVDSEMSGGHRTPRGSGGVGSTLLDSSQSLSSLARRVLAEI
CSEEWVLQKCLQNPDELYQPDMLLDPMLTPRQAQRLLHMICYPESASHTHPDLDQKTMIT
RLLENLEQWSLRMSWLDLQLMFKQFPSGSSELSAWLDTVARAVINVFQQPAPPPPDKDRT
GTDRGVVSTSKWSESVWLVAPLVAKLPAAVQGRVLKQAGQILESGWGAGCSGNCSSGGGG
GGSSHRDCKSHQSPSYKGSSGAGSGGKRGVSSGGCGGGCACGGGNAVRLANEPLLSLVLT
CLRHQDDQKESLLSSIHTQLQHYLSHAREHERAACADSWQDEAAPDALLLRFSLAGGMFD
AIRRSYQLTADWAVLLTQLVAHQLIDAYNNSLCRSNLFSTVIDMLATLIHSTLADGGDDN
NRKHYQNLMKKLKKEIGDRHGPSVQCVRQLLPLSKNTIIEVIACEPIGCLVDQKGNKITG
FDSDKKQGLRLTDKQRVSSWELVEGGRNPAPLSWAWFAATKIERKPLTYENAHRLLKYHT
HSLVKPLSYYLEPLPLPPEDLETNDIKQENGSLDSSPTGAGKPRSRNAPGKNIKKSKPTT
PTNGAPAAAGGAGAAGLAPQPAQQPQFMQQQQQWFPPPGQNYYNPPAGVSPRSVAAPPSN
NQSKQALSNMLRQRVPFNQMSQMQVNQSGGYPGAPHTRAQFPRQSMRQMQPNQMPGMQTA
QMNPMNAMSQMGPMGQMGGVQMPGQMGGGQMAANQMSAGQMGAGQMAGGQMGGMGGQMFS
GQYGGMQQSYGYSQQMMQGGQQQMMNQGMGQSVNQMGQQVNPMGQGVNSIGQNVGQMNQG
VGQPSQMPQSMGQMSQGMGQMGQPMGQMGQMGQGGGMPSMNSQGASMGPQGGNSMGGFPG
QQTFQQNMMGNRASQEAYLAQQRQNARPPYMQQAPNVTMGAMGGPAPPYPRGMQPQQSSQ
YQQQMNQQRMRQQMIAMQQQQQGGPGLVQHLQRQQYQPPY
NT seq
7323 nt
NT seq
+upstream
nt +downstream
nt
atggggattatgtacgagaaacggcctctgaagaggccaaggttgggtcctcctgatgtt
tatcctcaggagcctagacaaaaggaggacgagctgacatcaaccaatgtaaaacacgga
ttttcaacaacacctcagtcaagtgatgagtttggcactgcaagaaacttcaattattca
gcatcgaagatagggcagtttttctctagcattctgtcgaaaaaagaagaattgaatact
ttacctgattgtggaaggaaaagacaacaagtgaacccaaaggacaacttctggccagct
actgcccgcactaaagcacagattgaggcctggtttaaagacttggcaggaagtaaaccc
ctatcccaattggcaaagaaagcaccaaacttcaacaaaaaggaagagatctttataact
ctgacggagtaccaggtggccatgcctagagccgcctggttcatcaagctgagctctgca
tacacggtggctgtgtctgaggctaagataaagaaaagacagctccctgatccaacaact
gaatggacaacaacattgataaagttcctaaaggatcaaattcctaaactggcagaacat
taccaaagtgcagttcctggaaatgtgcctgataaaacaccaccttcacaatcaggacaa
ggaactcccagccacaattcgtctggcaacccaccgggcagctcgactcctaactccaca
gtctccaactctatgcattcacctggaaattccagtactctaggttcttcaactcctagt
tcgagcgacagcaccgactggcgtcaggctctaaagctctggaactactgctgccgcctc
gccaagtacctgctggacgaaggcctgctcgacaggcatgacttcctcacctggatcatt
gaactgctggataagagggcaccagatgatggactgttgaggctgttccttccactagct
cttcagcatatgggcgagtttgtctgctgcgaaagcctatcgcggcgtctcgccacgtcc
tgtgctaagaaagctgcggctatctgctccgtcctatccgagacaacactgcgcactctc
aaccagcctgcggtgttcactaaagtggcggaaagaactacagaaacaaatggcacacca
atgtcgccagccccggaaacgaacgccgacgttaagccaaatatagcacaaatcaaacgg
gaaccgacgccagttgaaaaccagggtacacccaatcccaaccattctttgggcacaccc
aaccccactcattccttggggactccaaaccccaatcattcgcttggcactccgaaccca
cagcagccgatggacgtgcaggtgaaggaggagaggggggcgtcgccagcgagggagact
aagcccacgatgcctgctgtggtagccgcagctatgaacccagtgcaagtcgggttcgga
gagatactcaactgtgcataccacagggatgttattatacagttggctacagttttgcag
ttaatatgcattgagtgtccgacggcgatggtctggtctgggtgcggctcgtcgctgcaa
ggctctccgctagacctgctcccgctgccgccgtccgcgctacccatgcctcatatggac
actgccgctactgaggagcataggaaaatggtttatgaggcagaacaagaaatctcagca
cgaagtaagaaagctgaaagtaaatggtgtacggataaatggcagaccagctctcaagcg
cgagtgttagcggttctggaagctctggacaggcactgtttcgatcgagtggaccctaac
aataatctagacacgttatataaggaagtgttcgcgaactgtccgccgccctccaaagaa
aatactgataccaaagatccggagtgggcgtgtccgtactcggtggtgcgcgtgatctgc
gagtgggcggtgtgcggcgcgcgctggggcgagcaccgcgcgcaggccgccgccgcgctg
ctcgaccgccgccagcaccacacgctgcaccatcaccacgaacaccacgccaccggtatg
taccacgcagaggagacaactccattaaaacgttcggatgacaaggaatccgttagctcc
ggtgcgggtttatacaacggaccgccgatttttcagaatcttttattacgattcttggat
agtgatgcacctgttttagatgaaagtccgaacgccccgcccggcaacaggcagcagttt
gccaacttggtgcatttgtttggagagctaatacgacgcgacgtgttctcgcatgacgcc
tatatgtgcacgcttatttctagaggggatttaatatctcctacggagcccacgtcaacg
ggaggcagtgcgcacacagtggcgccgcctgccaacagcaccggtactaaccacaatatg
gatgacgatatctttgccggtatcgacttgaaaccgaagatggaggagaacgtgcgaatg
gatttagacgattcaaagattgatgacgatctggacaagctgctacagcatataaaagaa
gaccaacaaaactccatggatgcaccggacagccctaaagaccccggcgaaccgtcgcat
agtgtgaattctcccatgatggttccaagcggcatgagcataccgggcataccttcgatg
agcatgggtcctatgtctgtaccaggcatacgtacaaccagctcaggcccgtcgagcggc
tgcggcggcccgtcaccgggcgcggtgtcccgccactaccactacacgcagcacttcccg
ctgccgcccgccgagcccgaccacacgccgcacgacgccaaccagcggcacatcctgctg
tacggcgtgggccgcgcccgcgacgaggccaagcatgccgtcaagaagatgaccaaagaa
atctgcaaattattctccaagaagttttcaatcgatgtagcagaagggggtaaaatcaaa
aagcactccagaagcgaattcaactttgaggcggtcactcaaaagtttcaggcgatgtcg
atgtacgagcagggcgcggtgtcgtgggcggtgggcagcgcggtgtgcgagtcgctggcg
gcgtacgcggcgggcgccaccacgtacctgccgcagcccgagcacgtcgccttcgcgctc
gacctcatggagatcgcgctcaacgtgcacggactcatcgagacctgcatacagatattg
aaagagttgtcggaggtggaaagcgcgttgatatctcgcggcgctccgagcagtggtctg
gctgcgcctcgagcttacacctctgcgctagctctgtacaccgtcggtgcgctgaggaaa
tatcactcttctctactactgtgtgtggagcaaacgtcggcggtgttcgagcagctgtgc
cggctggtgaagtgcgtcgtgaacccgggcgactgcggctcggccgagcgctgcgtgctg
gcgcagctgcacgacctgtacaaggccgccgcgcatctgtgccacgcgccgcacgctgac
accttcgccaatgcctaccccaagatcaagcaagctctatactccccactacaaccgacg
ccgtcaaactatccgtataatcctcaatttttgagtgaattctttacgaatccacgtaaa
ggtaaaatagaaatagcgtgggcccgtcaggtcgcggagtcgccggctaacagatacagc
ttcgtttgttccgccatgttggctgtgtgccgggaagtcgataatgatcgtgtgaacgag
ctgggcgtagtatgcgcggagatgacagcgtggtgtagtggtctcgcggcggagtggttg
ggggcgctagtggcgctgtgcggggcccagcactaccccgcgtccgcgccgcacgccgcg
ccgccgccgctctacccggacctgctgctgcatagggacctgcacgacgctgcggctcat
gatgcgctggccgtatttacttgtattcttgtagctcgccactgcttttccctcgaggat
ttcgtccgtcacgcggcgcttccgtccctgctgaaggcgtgcggtggcggcggctccggc
aacgcgcccaacgcgccctcacccgacaccggcgcgagactcacctgtcatctactgctc
aggctatttaaaactgtcgatactccacaacctggtctgtactcggtgtcgacgtccccg
ggcccgggcggcgcggcggcgggcgtgcgcctgtcctgcgaccgccacctgctggccgcc
gcgcacaagaacatcggcgtcgggcctgtgctcgccacgctcaaggctatactcatggtg
ggagactcgacggctcgtgatggcggcaagccgggcggcaagaagtcctgcgaactgtct
cacatactgggcactagcgacacggtccctactgacacggcgctggacctcatgtcgatg
gtagattcagagatgagtgggggccatagaactcctaggggtagcggcggagtcggctcc
accctcctggactcgtcgcagtcgctctcgtcgttggctcggagagttctagctgagatt
tgctctgaggagtgggtgctgcagaagtgtttgcagaaccctgatgagttgtatcagccg
gatatgcttctagatcctatgctaactccgaggcaggcgcagaggttactccatatgatt
tgctatccagaatcggcgagtcacacgcatccagatcttgatcagaaaacaatgatcacc
agactgctagagaacctggagcagtggtcgttgcgcatgtcgtggctggacctgcagctg
atgttcaagcagttcccgagcgggtcgtcggagctgagcgcgtggctggacacggtggcg
cgcgccgtcatcaacgtgttccagcagcccgcgccgccgccgcccgacaaagacaggacc
ggcacagaccgcggtgtggtgagcaccagcaagtggtcggagtcggtgtggctggtggcg
ccgctcgtcgcgaagctgcccgccgccgtgcagggcagagtgctcaagcaagctggacag
atattggaaagtggttggggcgcgggctgtagcggcaactgctccagtggcggcggcggc
ggcggcagctcacacagggactgcaagagtcatcaaagtcctagttataaaggttcatcg
ggtgctggcagtggaggtaagcgtggtgtgagtagcggcggctgcggcggcggctgcgcg
tgcggcggcggtaacgccgtcagactcgctaacgagcctctcctgtcgctggtactcaca
tgtctcaggcatcaggatgatcagaaggagagtctcctgagctcgatccacacgcagctg
cagcactacctgagccacgcgcgcgagcacgagcgcgcggcgtgcgcggacagctggcag
gacgaggccgcgcccgacgcgctgctgctgcgcttctctctcgccggcggcatgttcgac
gccatccggaggtcctaccagctgaccgccgactgggccgtcttactgactcagctggtc
gcgcatcaactcatcgatgcttataataatagtctttgtcgtagcaacctgttctcgacg
gtcatcgacatgctcgccactctgatccactccacgctggccgacggaggcgacgacaac
aaccgcaagcactatcagaatctcatgaagaagctgaagaaagagataggagatagacac
ggcccgtccgtgcagtgcgtgcgacaactactgccgctctctaagaatactatcatagag
gtaatcgcgtgcgagccaattggatgtctagtcgatcagaaaggaaataaaatcactggt
ttcgacagtgataagaaacagggtctccgcctaacagacaagcagcgcgtgtctagttgg
gagctggtggagggcgggcggaaccccgcgccgctgtcgtgggcgtggttcgccgctacc
aagatcgagaggaaaccgttgacgtatgaaaatgctcacaggctacttaagtaccacact
cacagtctagtcaagcccctaagttattacctggagccgctacccttgccgcctgaggac
ctggaaactaatgacatcaaacaggaaaatggaagcctggattcaagtcccaccggtgct
ggaaaaccgagatcacgaaacgctccgggcaagaatatcaaaaagtccaaaccaactaca
ccgacaaacggcgcccctgcggcggcgggtggcgcgggggccgcgggcctggcgccgcag
cccgcgcagcagccgcagttcatgcagcagcagcagcagtggttcccgccgcccgggcag
aactactacaacccgccagctggcgtcagtccgcgcagcgtggccgcgccgccgtccaac
aaccagtcgaagcaggcgctcagcaacatgctgcggcaacgcgtgcccttcaaccagatg
tcgcagatgcaggtcaatcaaagcggcggctacccgggcgcgccccacactcgcgcgcag
ttcccgcggcagagcatgcgccagatgcagcccaaccagatgcccggcatgcagaccgca
caaatgaatccaatgaacgctatgtcacaaatgggtcctatgggtcaaatgggcggcgtt
cagatgccaggtcagatgggaggaggacaaatggccgccaaccagatgagcgccgggcag
atgggcgcggggcagatggcgggcggccagatgggcggcatgggcggacagatgttcagc
ggacagtacggcggcatgcagcagagctacgggtacagccagcagatgatgcagggcggg
caacagcagatgatgaaccagggaatgggccagtctgtgaaccaaatgggtcaacaagtc
aacccgatgggtcaaggtgtaaactctatcggacagaacgtgggtcaaatgaaccagggt
gtcggacagccatcgcagatgccccaatccatgggtcagatgagtcaaggcatgggccag
atgggtcaacccatgggccagatgggccagatgggtcaaggcggcggcatgccgtctatg
aacagccagggagcgagtatgggcccgcaagggggtaactccatgggagggttccctgga
caacaaacattccaacagaatatgatgggcaaccgcgcaagtcaagaagcgtatctggct
caacagagacagaatgctcggccaccttacatgcagcaagcgcctaacgtaacgatgggc
gcgatgggcgggccggccccgccctacccgcgcggcatgcagccgcagcagagctcgcag
taccagcagcagatgaaccagcagcgcatgcgacagcagatgatagccatgcaacagcag
cagcagggagggcccggactcgtgcagcatttacaacgacagcagtaccagccgccttat
taa
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