Trichoplusia ni (cabbage looper): 113492864
Help
Entry
113492864 CDS
T05757
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113492864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113492864
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113492864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
113492864
NCBI-ProteinID:
XP_026726366
UniProt:
A0A7E5VDL7
LinkDB
All DBs
Position
4:7785282..7787511
Genome browser
AA seq
680 aa
AA seq
DB search
MARHRDVRNRSYSDDYDDDDVYGHSVEDESYMSPSDTAQWIYDRSRNQQAISHFMQSHND
IQEEPEDDVAESSHPALERRESIDFRSLNLDEDDEAKLMSCLDELRNVIGDTISDNILIQ
TVIKHKFDFNKSLDDILNRNSKEPVLPKLEPVKPVVIIDPVKAPVITTIETAPKVIATNL
EPKTAAVVKGFKVNQDGSSSSRPQTPRDQSPCTDRVSKTELLDEVKITPKVKENKVDANT
QYSNERGSDKDHLYIVVIGHVDAGKSTLMGRLLCDLGEVNQRTLHKYEQESKKIGKQSFM
YAWVLDETGEERVRGITMDIGRAQFETKTKRVIILDAPGHADFIPNMITGAGQADVALLV
VDATRGEFESGFDLGGQTREHALLVRSLGVSQLAVAVNKLDTTNWSQERFNEITKKLKFF
LKQAGFKDTDVTYVPCSGLTGENLVKSPTEAELLKWYKGPCLLEVIDKFNVPERPVSKPL
RLSVNDVYKGTGAGFCVAGRIENGMISKGDKVLVCPTKEMAEVRNISINEMTSNVAFAGD
QVSVTLSGVDMLNVAVGYVLSCPVQQVPVTTKFEARIVVFNVKVPITRGYPVLIHHQSLV
ESANIVKLKALLNKSTGELMKKNPRVLGNNCVAVVDIEVCRPICVERYKDVKELGRVMLR
VAGTTIAAGLVTDILKTKSI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccatcgtgacgttcgaaatagaagctactccgacgactacgacgatgacgat
gtttatggacattccgttgaagatgagagctatatgtcgcctagtgacactgcacaatgg
atatacgatcggagtcgtaaccagcaggccatatcgcacttcatgcagagtcacaatgac
atccaggaggaaccggaggacgatgttgccgagtccagtcatcccgctctcgaacgacgc
gagtccatagacttccgtagccttaaccttgatgaggatgacgaggccaagctcatgtcg
tgcctagacgagcttaggaatgttataggtgacacaatttcagacaatatactcatacaa
acggttattaagcacaagtttgattttaataaatctcttgatgatattttgaacagaaac
agtaaggagccagtattaccgaaactagagccggtaaaacctgtggtgatcatagaccct
gtaaaagctcctgttataacaactatagagacagcaccaaaagtaattgctactaatctg
gaaccaaagactgctgcagttgtcaaaggattcaaagtgaatcaagatggcagctctagc
agtcgcccgcaaacacccagagaccaatcaccctgcacagatagagtatcaaagactgaa
ctactagatgaagttaaaataacacctaaagtgaaagaaaacaaagtagatgcaaacaca
caatactcaaatgagaggggatctgataaggaccacttgtatatagttgttataggacat
gtggatgcgggcaagtccactctgatgggacgactgctctgtgaccttggagaggtgaac
caacggactctgcacaagtatgagcaggagagcaagaagattggtaaacaaagttttatg
tatgcttgggttctggacgaaactggtgaagagagagtgagaggcatcactatggacata
ggaagagcacaatttgagaccaagaccaaaagagttattatattggatgctcccggccat
gccgacttcatccctaatatgataacaggtgcaggccaagctgatgttgctctccttgta
gttgatgctactagaggggaatttgaatcaggctttgaccttggaggtcagacaagggag
catgctctactagtgagatcactgggagtgagccaacttgcagtagcagtgaacaaacta
gacacaacaaattggtcccaagagaggtttaatgagattacaaaaaaacttaaattcttc
cttaaacaggctggttttaaggacaccgatgtaacatatgtgccttgttcaggattaacc
ggtgaaaacttagtgaagtcaccaactgaagcagagttattgaagtggtacaaaggacca
tgtcttctagaagttatagacaaatttaatgtgcctgaaaggcctgtgtccaaaccctta
cgcttatctgttaatgatgtatataaaggtactggtgcaggtttctgtgtggccgggcgg
attgagaatggcatgatcagtaaaggagataaggtgttagtatgtccaactaaagaaatg
gctgaagtaagaaacataagtatcaatgaaatgaccagcaatgttgcctttgctggagac
caggtcagtgtgaccctctctggtgttgacatgctgaatgttgcagttggatatgtactg
agttgtccagtccaacaagtgcctgtaactactaagtttgaagcaagaattgtagttttt
aatgtcaaggtgccaataacaagaggataccctgtgctcattcatcaccagtcattagtg
gagtctgctaacattgtaaaactgaaggctttgttgaataaaagtacgggtgagctgatg
aagaagaacccgcgtgttttgggcaacaactgtgtggctgttgtggatatcgaggtgtgt
cgccccatctgtgtagagcggtacaaggatgtgaaggagctgggccgcgtcatgctgcgc
gtggccggcaccaccatagccgccggcctcgtcaccgacatcctcaaaaccaaatcgatc
tga
DBGET
integrated database retrieval system
