Trichoplusia ni (cabbage looper): 113492940
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Entry
113492940 CDS
T05757
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03030
DNA replication
tnl03410
Base excision repair
tnl03420
Nucleotide excision repair
tnl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113492940
03410 Base excision repair
113492940
03420 Nucleotide excision repair
113492940
03430 Mismatch repair
113492940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnl03032
]
113492940
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113492940
DNA replication proteins [BR:
tnl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113492940
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113492940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_14
AAA_30
RuvB_N
AAA_5
AAA_33
AAA_16
AAA_17
NTPase_1
AAA_18
RNA_helicase
nSTAND3
BRCT_2
AAA_19
AAA_assoc_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
113492940
NCBI-ProteinID:
XP_026726477
UniProt:
A0A7E5VDX1
LinkDB
All DBs
Position
4:complement(9173139..9182064)
Genome browser
AA seq
1074 aa
AA seq
DB search
MSRDIRTFFQLKKTPKPTVEDDDDVIPESPDVQITKPKKKDVKRRAIIKDDSDEEIFSTK
KKTNNTQATNKIKSPKPALKEVKVVDMFGNEPIKRTKPLINKKKKTELGIHSDDEFEKSL
LEIDNEQLESNEEASSSKIKEEKQSPTVQTDSNKTDKTPSKKKNKNNNLELNKESETSKT
PSRNDGTESKTSKTNKNNQTVSNSNNSSKKSKMEYSKRKFAEFLEDGDPDLSNKKKKLNE
SKTKSEEIDEDMDSSFIDDSDDKNKNKKKKFNKSLNESVLTDEERHERKMHSAALYKSYL
NRSGPKNLGAKEIPEGKHDCLKDCAFVLTGVLDSFEKDEITAAINQYGGVVKSGVTKKVT
HVLAGEDGGPAKMAKAEELGIPIINEDQFLKMITDRSQGKPTKSESKKEIKKEKSPVKKV
SKDKLSPKDKSVKDTDNHVENKTKKSPMDKIKTESKSTTSISRSKLDVNESKNHDKVKSP
KNIKEEKVGIKVEPSSSKASSQVSRTTTEFTEHPANASMWVEKYKPQNIKQIIGQHGDAS
NVKKLMNWLTKWYVNRQAKLPKPNPYAHNDDGGYYKAVLLSGPPGVGKTTTVSLVCKEMG
FDMVEFNASDTRNKTLIKEQIGELLNMTSLSGYAHGQVGKQALSKKHVLVMDEVDGMAGN
EDRGGLQELIGLIKTTSVPIICMCNDRNSQKMRSLVNYCYDLRFQRPKLEQIKAAMLSIC
CKEGVRIPADALSQLIVSAGHDVRQTLNLLSLWAAGASDPDTLRADAKVARKDFRLGPWD
VIEKVFSAEEHKTMSISDKSDLFFFDYSLGPLFVQENYLTVEPRCPKHETLQRISRAADS
ISLGDLVESKIRRSQAWSLLPTQAILSSVIPGFEMSGQKKGRTQFPGWLGKNSRATKFQR
LCQEIHAHTRLSTSGSKSSIFLDYSSHIRDAIVNPLIKDKLDGVTKSLEVLESYHLLRED
LDSLVELSLWPGKRDPTALIDSKVKAAMTRTYNKNARALPYAQAAVKRGKPKADDELAGE
DEAEAEAEDDEPPDSDPENDALIKKKKTKETDKPKATKSQTKAKPSTSKKKKEK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagatataagaaccttctttcagctgaagaagactccaaaacccaccgttgaa
gacgatgatgatgtgataccagagtcgcctgatgtgcaaatcactaaacctaagaaaaag
gatgttaaaaggagagccataataaaagatgattctgatgaagaaatattttcaaccaag
aagaaaactaataatacacaagcaactaacaaaatcaaatcaccaaaaccagctcttaaa
gaggttaaagtagtagacatgtttggcaatgaaccaataaaaagaacaaagccattaatt
aataaaaagaaaaaaacagagctaggcatacattctgacgatgagtttgaaaagagcctt
ctagaaatagacaatgagcaattggaatcaaatgaagaagccagttcctctaaaattaaa
gaagaaaaacaatcgcctactgttcagactgattcaaataaaacagacaaaaccccatca
aaaaagaaaaataagaataataacttagaattaaataaagaatcagaaacaagtaaaaca
ccttcaagaaatgatggtactgaaagtaaaacatcaaaaacaaataaaaataatcaaaca
gtttccaattcaaataacagttcaaagaaatcaaaaatggagtatagtaaacgtaaattt
gctgaatttctggaggatggcgacccagatctgagtaataaaaagaaaaaacttaatgaa
agcaaaacaaagtctgaggaaattgatgaagatatggattcatcgtttattgatgacagt
gatgataagaacaaaaataagaaaaagaaattcaataaaagcttgaatgagtcagtgctt
actgatgaagaaagacatgaaagaaaaatgcattctgcagctttatacaagagctattta
aaccgatctggtcccaaaaatctaggagctaaggaaatcccagagggaaaacatgattgc
ctaaaggactgcgcgtttgtactgactggtgtcctcgactcgtttgagaaagacgaaata
acagcagcaatcaaccaatatggtggagttgttaaaagtggggtgaccaaaaaggtaacc
catgtcttagctggtgaagatggcggcccggccaaaatggcaaaagcagaagaactagga
atacctattataaacgaagatcaattcctcaaaatgatcacagacagatcacaaggcaaa
ccaacgaaatctgaaagtaaaaaagaaatcaagaaagaaaagagcccagtcaagaaagtt
tcaaaagataaattgagtccaaaagacaaatctgtaaaagacacagacaatcatgttgaa
aacaaaacaaagaagagcccaatggacaaaataaaaacggaatcaaaatcgaccactagt
atttcaaggagtaaattagatgttaatgaatcaaagaatcatgataaggtgaaaagtcct
aaaaatattaaggaagaaaaagttggaattaaagttgaaccaagttcaagtaaagcttcg
agtcaagtcagtcgcacaaccacagaatttaccgagcatccagctaatgctagcatgtgg
gtggagaaatacaagcctcagaacatcaaacaaattattgggcaacacggcgatgcaagc
aacgttaagaaactaatgaactggttaacaaaatggtatgtgaacagacaagctaaatta
ccaaaacctaatccttacgcacacaacgacgacggaggttattataaagcagtattgctg
tcgggtcctcctggtgtaggtaaaacaactacagtaagcttagtctgcaaggagatgggt
ttcgatatggtggaattcaacgcctcggacaccaggaacaagacgctcatcaaggagcag
attggggagcttctcaacatgacttcgctctctggatacgctcatgggcaagttggcaaa
caagcgttatcgaagaaacatgttctagtcatggatgaagttgacggcatggcgggaaat
gaagaccgaggtggcctccaagagctgatcgggttgatcaagacaacatcggtgcctata
atatgcatgtgcaacgacaggaacagtcagaagatgaggtcccttgtcaactactgctac
gatctccgttttcagagacctaaacttgaacagataaaggcggccatgttatcgatatgc
tgcaaggagggcgtgcgtatcccggcggacgcgctgtcgcagctgatcgtgtcggccgga
cacgacgtgcgccagacgctcaacctgctgtcgctgtgggcggccggcgccagcgacccc
gacactctgcgggcagacgccaaggtcgccaggaaggacttccgactgggcccctgggat
gtcatagaaaaggtattttcagcagaggaacacaagaccatgagtatcagcgacaagagc
gacctcttcttcttcgactacagtctcgggccgctgttcgttcaagagaactacttgacg
gtcgaacctcgatgtcccaagcatgaaacccttcagaggataagcagagctgcggacagt
atcagtttgggagacctggtcgaaagcaagatacgtcgcagccaagcgtggagtctcctg
ccgacacaggcaatattgagctcagtgatccccgggttcgagatgtccggacagaagaag
ggccgcacgcagttcccgggctggctcggcaagaactcgcgcgcaaccaagttccagcgc
ctctgccaagagatacacgctcacacccggctcagcacatcgggatcaaaatcttccatc
ttcctggactacagcagtcatattcgcgacgctatcgtaaatcctcttatcaaggacaaa
cttgatggcgtaacaaagtcgcttgaagtgttggagtcctaccacctgctgagggaggac
ctggactctttggtagaactgtccttatggccagggaaacgggatcctactgcacttata
gattcgaaggtgaaggcggccatgactcgcacgtacaacaagaacgctcgcgcgctgccg
tatgcgcaggccgccgtcaagcgcgggaagccgaaagcggacgacgagttggccggggag
gacgaggccgaggccgaggccgaggacgacgagccgcccgacagtgaccccgagaatgat
gcgctcatcaagaaaaagaaaactaaggaaacagacaagccgaaagccaccaaaagtcag
actaaggcgaaaccgtcaaccagtaagaagaaaaaagagaaatag
DBGET
integrated database retrieval system
