Trichoplusia ni (cabbage looper): 113492961
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Entry
113492961 CDS
T05757
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113492961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113492961
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
113492961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
113492961
NCBI-ProteinID:
XP_026726515
UniProt:
A0A7E5VE48
LinkDB
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Position
4:complement(9609620..9615919)
Genome browser
AA seq
512 aa
AA seq
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MTSPGPSNSFQATSAAASVQEFKIRVPKNVKKKYHVMRFNATLNVDFAKWTHVKMERENN
IKEFKGLDEDMPKFGAGSEYGRDVREEARRKKFGIISRKYKPEDQPWILKVGGKTGKKFK
GIREGGVSEHAAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEADEEFGRRNKVL
NYFSLMFRKRMRGDDAADDADDPDEKKLKGAKAKKDLKLSEMDEWIDSDDDSSNSDNEKE
KDNDSDSGANKKKKKKAAANKKKKKVEDEAFEESDDGDEEGREKDYISDSSESESDHETK
TNKEMQGVAEEDALRKLLASDEDSEEEQENKEQEEEQEDEPTKEGEERASKLTKKKKKPD
DAKKDSSSELSSDSDTDPEGGAPAAKKPKKSKSNDKNGPSASTSGSGRASSPPSSAAALA
VAAANAANSNAPPTKRPKLDASYTECGVTEEAVRRYLARKPMTTTELLTKFKSKRTGVSS
ERLVETMTQILKRINPVKQNINGKMYLSIKNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccctggcccatcgaattcatttcaggccacttcggccgctgcctccgtacaa
gagttcaagatcagagtgccaaagaatgtaaaaaagaagtaccatgtaatgaggtttaat
gccacactcaatgttgactttgcaaagtggactcacgtgaagatggagagagagaacaat
attaaagagtttaagggacttgatgaagatatgccaaaatttggtgccggctcagaatac
ggccgcgacgtgcgagaggaggcgcggcgtaagaagtttggtatcatatcccgcaagtac
aaaccagaggaccaaccttggatacttaaagttggcggcaaaactggtaaaaagttcaaa
ggcatccgcgaaggtggtgtatccgagcatgccgcgtattacgtgtttacacatgcggcc
gacggtgccatcgacgcctacccgctgcaggaatggtacaacttccagcccatacagaga
tacaaggcattgtccgcggaagaggctgacgaagaattcggaagacgtaacaaagtgctg
aactacttctcgctgatgttccgcaagcgcatgcgcggcgacgacgcggcggacgacgcg
gacgacccggacgagaagaaactcaaaggggccaaagctaagaaagatctcaaactatcg
gagatggatgaatggatagactcggatgacgactcgtccaactcggacaacgagaaggaa
aaggacaacgacagcgactccggcgccaacaagaagaagaagaagaaagcggctgctaac
aagaaaaagaagaaagtggaagatgaagccttcgaagagagtgatgatggagacgaggag
gggcgggagaaggactacatatcagattcttcagagagtgaatcagatcacgagacgaaa
acaaacaaggagatgcaaggtgtggctgaagaagacgcgctaagaaagctcctggcttcg
gacgaggactcggaagaggaacaagagaacaaagaacaagaggaagagcaggaggacgag
cccaccaaggagggtgaggagcgcgccagcaagctcaccaaaaagaagaagaaacctgat
gatgcgaagaaagattcgagtagcgagttgagttcggactcggacacggacccggagggc
ggcgcgccggccgccaagaaacccaagaagagcaagagcaacgacaagaacggaccttct
gcgagtactagcgggtcagggcgcgcgtcgtccccgccgagctcggcggcggcgctggcg
gtggcggccgctaacgccgccaactccaacgcgccgcccaccaagcgacccaagctggac
gccagctacaccgaatgcggcgtaacagaggaagcagtacggcgatacctcgctcgcaaa
cctatgacgacaacggaactccttacgaagttcaagtccaagcgcacgggcgtcagcagc
gagcgcctcgtcgagaccatgacgcagatcctcaaacgaatcaaccccgtcaagcagaac
attaacgggaaaatgtaccttagtataaagaacacgtga
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