Trichoplusia ni (cabbage looper): 113493103
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Entry
113493103 CDS
T05757
Name
(RefSeq) transcription factor SOX-21-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113493103
Transcription factors [BR:
tnl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113493103
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
113493103
NCBI-ProteinID:
XP_026726724
UniProt:
A0A7E5VEI9
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Position
4:13292671..13332243
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AA seq
349 aa
AA seq
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MSAAGAMCDRTGFGSTMGHFPMGPMSAMGAIGSMGSISAMNGPQQKKAQEEHIKRPMNAF
MVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKRIRAMHMKEHPDY
KYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGGMGQAMGGYYGAAYGPLGASMAA
AAAAAAQQNAINAALTPNPQVGSSMDMSKYSIEAEKYRSYGMYPDPSRGYLDSAALSKAY
MYMDQQQQRSYPVDISKMYSEASAAAMAGLSSVNSAPSSLSPRSPAESPDMTPKAQDRTE
GSSSSGSNPSPSLPYYQGSSSILMPQYPGQYPQSTQAGSEFRRPLTVIF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgctggtgcgatgtgcgaccgcaccggcttcgggtcgaccatgggccacttc
cccatgggtcccatgtcggcgatgggcgccatcggctccatgggctccatctccgccatg
aacgggccccaacagaagaaggcccaagaagaacacatcaaaagacctatgaacgccttt
atggtgtggtcaaggcttcaaagacggaagattgcacaggataaccctaagatgcacaac
tctgagatctcgaagagattaggtgctgaatggaaactcctgacagaagacgaaaagaga
ccgttcatcgacgaagccaagcgcatcagggcgatgcacatgaaggaacaccctgactac
aagtaccggccgcggaggaagcccaagacattgaggaaggagggctacccgtactccata
ccgtaccccagcgtgccaatggacgctttgagagccggtatggccggcggaggtatggga
caggctatgggagggtactacggggcagcttacggcccgctcggggccagcatggcagca
gcagcggctgcggctgcgcagcagaacgctataaatgctgcgcttactcctaacccacag
gttggctcatcaatggacatgtcgaagtactccatcgaggcggagaagtaccgcagctac
ggcatgtacccggatccgtcgcggggctacctggactcggcggcgctctccaaggcctac
atgtacatggaccagcagcagcagcgctcctacccggtcgacatcagcaagatgtactcc
gaggcgtcagcagccgccatggcggggctgagctcagtcaactctgccccttcgagcctt
tccccgcgctccccagcggaatccccagacatgacccctaaagcacaggacaggactgag
ggcagctcgtcgtctggctccaatccttctccttccctcccgtactaccagggctcgtcc
agcatcctcatgccgcagtaccccggccagtacccgcagagcactcaagcgggctccgag
ttccgacgacccctcactgtcatattctga
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