Trichoplusia ni (cabbage looper): 113493499
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Entry
113493499 CDS
T05757
Name
(RefSeq) chitin synthase chs-2
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl00520
Amino sugar and nucleotide sugar metabolism
tnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
113493499
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tnl01003
]
113493499
Enzymes [BR:
tnl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
113493499
Glycosyltransferases [BR:
tnl01003
]
Polysaccharide
Structural polysaccharide
113493499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
ChitinSynthase_IV_N
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
113493499
NCBI-ProteinID:
XP_026727306
UniProt:
A0A7E5VGD7
LinkDB
All DBs
Position
4:complement(19658858..19685440)
Genome browser
AA seq
1565 aa
AA seq
DB search
MATSGGKRREEVSDNSDDELTPLANDIYGGSQRTVQETKGWDVFREFPPKQDSGSMETQK
CLDFTVRLLKVTAYLVVFIVVLGSGVVAKGTTLFMTSQLKKDRRIAYCNRNLGRDKQFVV
SLPDEERVAWMWAILAAFAIPEIGTLIRSVRICFFKSSKRPSSTQFMVIFIAESLHTIGM
GLLFFLILPELDVVKGAMITNCLCIIPAILGLLSRNSRDSKRFVKVIVDMAAIVAQVTGF
IVWPLLENKPVLWLIPVSALCISLGWWENYVTRQSPIGIVKSLARLKDELIFTRYYTYRF
ISLWKILLFLMCILLSLWIEGDEPAMFFQLFNSGFGPHSIVVEEVQVQLGGTVIPDLANV
TLTGDSVEVAAAYKSAFYVMLIQIFAAYICYIFGKFACKILIQGFSYAFPINLVIPLVVN
LLIAACGIRNGDNCFFHGTVPDYLYFESPPVFTLSDFISRQMAWVWLLWLLSQTWITIHI
WTPKAERLASTEKLFVVPMYNGLLIDQSMALNRKRNDQRDVKTEDLAEIEKEKGDEYYET
ISVHTDNTGSSPKAIKSSDQITRIYACATMWHETKDEMMEFLKSILRLDEDQCARRVAQK
YLRVVDPDYYEFETHIFLDDAFEISDHSDDDSQVNRFVKLLVDTIDEAASEVHQTNIRIR
PPKRYPAPYGGRLTWVLPGKTKMICHLKDKAKIRHRKRWSQVMYMYYLLGHRLIELPISV
DRKEVMAENTYLLTLDGDIDFQPHAVRLLIDLMKKNKNLGAACGRIHPVGSGPMVWYQLF
EYAIGHWLQKATEHMIGCVLCSPGCFSLFRGKALMDDNVMKKYTLRSDEARHYVQYDQGE
DRWLCTLLLQRGYRVEYSAASDAYTHCPEGFNEFYNQRRRWVPSTIANIMDLLADCKHTI
KINDNISSPYIAYQMMLMGGTILGPGTIFLMLVGAFVAAFRIDNWTSFEYNLYPILLFMF
VCFTMKSEIQLLVAQILSTAYAMIMMAVIVGTALQLGEDGIGSPSAIFLMSLSSSFFIAA
CLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVTWGTREVQVKKTKKEIEAEKKE
AQEVKKKAKQNSLLGFLQGVNSNEEEGSIEFSFAGLFKCLLCTHPKGNEEKVQLMHIAST
LEKLEKKLETVERAVDPHGISRGRKLSIGPRGSTSGDHQLDALAEGPEEDNDLDSETDTL
STAPREKRDDLINPYWIEDPELKKGEVDFLNPAELQFWKDLIDKYLYPIDANKEEQARIS
KDLKELRDSSVFSFFMVNALFVLIVFLLQLNKDNLHFKWPFGVKTNITYDEVTQEVLISK
EYLQLEPIGLVFVFFFALILVIQFSAMLFHRFGTISHILSSTELNWFCSKKSDDLSQDAL
LDKNAIAIVKDLQKLNGLDDEYDNDSGSGPHNVGKRKTIHNLERARQKKRNIGTLDVAFK
KRFFNMNANDGPGTPVLNRKMTLRRETLKALETRRNSVMAERRKSQMQTLGANNEYGVTG
MLNNNLGVGPRHRTSTANISVKDVFGEPNGGQVNRGYETTLGDEEDTNSMRLQPRQNQVS
FQNRY
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgggagggaagcgtcgcgaggaggtgagcgacaactcggacgacgagctt
acgcccctcgctaacgacatctatggcggcagccaaaggacagtacaagaaacgaaagga
tgggatgtcttcagagaattcccaccgaagcaggacagtgggtctatggaaacccagaaa
tgtttggatttcaccgtgcggttactgaaagtgacggcatatctagtcgtcttcatcgtg
gtcctagggtccggggtcgtcgcaaagggcacgacgctcttcatgacttcacagctcaag
aaggacaggcggattgcgtattgtaataggaatttaggtagggataaacaatttgtagta
agtctgccggatgaagaacgagtagcgtggatgtgggccattctagcagcgtttgccatc
ccagagataggaacacttatacgatcagtcaggatatgtttcttcaaatcctcgaagaga
ccgtctagcacgcagttcatggtgatatttattgcggagtcactgcatacaataggaatg
ggactacttttcttcctaatcctgccagagctggacgtggttaaaggagccatgatcacg
aattgtctatgcattattcctgcgatactgggtttgttgtcacgtaactcacgcgactcg
aaacggttcgtgaaagtgatcgttgatatggcggcgatagttgcgcaagtcactggcttc
atagtgtggccactgttggagaacaagccagtactgtggctaataccagtttcagcgtta
tgtatatccctgggctggtgggagaactacgtaacacgacaaagccccataggtatcgtc
aaaagtttggccagattaaaggatgaattgattttcactcgctactacacataccgtttt
atatcgttatggaaaatcctgttattccttatgtgtattctcctgagcctttggatcgaa
ggtgacgagccagctatgttcttccaactgtttaattctggtttcggaccccacagtatc
gtggttgaagaggtacaagtccaattgggaggaacagtaattcctgatttagcgaatgtg
acattgactggagactcggtagaagttgcagcagcctacaaatcagcattttacgtaatg
cttatccaaatatttgcggcgtacatctgctacatttttggaaagtttgcgtgcaagatt
ttgatccaaggcttcagttatgcgttccccatcaatctcgttatacctctggtcgttaat
ttattgattgctgcttgcggtattagaaatggcgacaactgtttcttccatggcactgtc
cctgattacctttactttgagagcccaccagtgttcactctgagcgattttatatcacgt
caaatggcatgggtttggttattgtggctgctatcacaaacgtggattactatccatatc
tggactcctaaagcagaacgtttggcttcaaccgagaagttgtttgttgtgcccatgtac
aatggattactgatagatcaaagtatggctcttaatagaaagaggaatgaccagagagat
gtaaagactgaagaccttgcagaaatagaaaaagaaaagggcgatgaatactatgagaca
atttcagttcacacagacaatactggctcttctcctaaagcgattaaatcatcagatcag
ataaccaggatatacgcatgcgctactatgtggcacgaaactaaagacgagatgatggag
ttcttgaagtctatcctgaggttggacgaggatcagtgcgctcgacgtgttgctcaaaag
tatttgagagtggttgaccctgactactatgaattcgaaacacacattttcttggacgat
gcctttgaaatatcggaccacagtgacgatgattctcaagtgaatcgattcgtaaaactt
ctcgtggatactatcgatgaggctgcttcggaagtacatcagacgaacattcgaattcga
ccaccgaagagatatccagcgccgtacggaggacgtttgacatgggttcttccaggaaaa
acgaaaatgatatgccatctgaaagataaagcaaagattcgtcacaggaaacgttggtct
caggtaatgtacatgtactatcttctcggacatcgtcttattgagctgcctatatctgta
gaccgtaaggaagttatggctgagaacacatatctgcttactttggacggagacatcgat
ttccaacctcatgctgtgcgtttgctcattgacttgatgaaaaagaataaaaatctggga
gctgcttgtggccgtattcatcctgtaggctctggacccatggtgtggtatcaacttttc
gagtacgctattggtcattggctgcaaaaggcgactgaacacatgattggatgcgtactc
tgtagccctggatgcttctctctgttcagaggaaaagctttgatggacgataacgttatg
aagaaatacacattgcggtctgatgaagctcggcattacgtgcaatacgatcaaggggaa
gatcgttggttgtgtacgctgttacttcaacgtggctatcgtgtagaatattcagctgcc
tccgatgcctatacccactgtcccgaaggtttcaatgagttctacaatcagcgtcgtcga
tgggtgccctctactatagccaacattatggacttgctagccgattgcaaacatacgatc
aagatcaacgataatatttccagtccctatattgcataccagatgatgttgatgggtggt
actatcttgggccccggcactatattccttatgttggtgggtgccttcgtggctgctttc
cgaatcgacaactggacatctttcgaatacaatctgtaccctatcttgttattcatgttt
gtttgtttcacgatgaaatcagaaattcaattactggtggctcaaatattgtcgacggca
tatgctatgataatgatggctgtgattgtcggtactgctctccaattaggcgaggacgga
atcggatctccttcggctatattcttgatgtcactttccagttcattctttatagccgct
tgtttacatccacaggagttctggtgtatcgtacctggcataatttatcttttgtctata
ccctctatgtacttgcttttgattttgtattctattataaatctaaacgtagtcacttgg
ggtactcgagaagttcaagtaaaaaaaacaaagaaggaaattgaagcagagaagaaagaa
gctcaagaggtaaagaaaaaagccaaacagaattctttgctcggcttcctccaaggagtg
aacagcaatgaggaggaaggctctattgaattctcattcgctggtttattcaaatgtttg
ctgtgcacgcatccaaaaggaaatgaagaaaaagtgcagctaatgcacatcgcatccacg
cttgagaaattggaaaagaagttagaaacagtggagagagctgtcgatccccatggtata
agtagaggacggaaattatctattggaccaagaggcagtaccagtggcgaccatcaatta
gatgctcttgccgaaggccccgaagaagataatgacttggattctgaaaccgacactctt
tctactgcacctagagagaaacgggatgacctcatcaacccgtattggatcgaagacccc
gaattaaagaagggagaagttgactttttgaaccccgccgagttacagttctggaaagat
ctcattgataaatatttatatcccattgatgcaaataaagaagaacaggctcgtatatcc
aaggatctgaaagaattgcgagattcatctgtcttttccttctttatggtcaatgccctc
tttgtattgattgtattcttgctacaactgaacaaggacaaccttcactttaaatggccc
ttcggagttaaaactaacataacgtacgatgaggttactcaagaggtattaatttccaag
gaatatttacaattggagcctattggtttagtgttcgtgttcttcttcgccttgatcctg
gtgatacagttctccgctatgttgttccatagatttggaaccatttcgcacatattgtcg
tccacagaactgaactggttctgttctaagaagtcggacgacctttctcaagatgcactg
ctggataagaatgcaatagcaatagtaaaagatttgcaaaagttgaatggtttggacgac
gaatatgataatgattcgggctcaggtccgcataacgttggcaaaagaaagaccattcac
aatttggagagggcgagacaaaagaagaggaacattggcacgctggacgttgccttcaag
aaacggttcttcaatatgaatgctaatgatggcccaggtaccccagtactaaaccgtaag
atgactttacgaagagaaacgttgaaggccttggagacaagaaggaactccgttatggcg
gaaagacgaaaatcgcagatgcagacactcggtgccaataacgaatatggagttactgga
atgcttaataataatctaggtgttggtccgcgccaccgaacatcaacggctaacatttct
gtgaaggacgtcttcggtgagccaaacgggggtcaagtcaaccgaggatacgagactacc
ctaggcgacgaagaggacaccaactcaatgagattacaacccagacagaaccaagtttcc
tttcagaatagatattaa
DBGET
integrated database retrieval system