Trichoplusia ni (cabbage looper): 113493551
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Entry
113493551 CDS
T05757
Name
(RefSeq) uncharacterized protein LOC113493551 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tnl03000
]
113493551
Transcription factors [BR:
tnl03000
]
Eukaryotic type
Other basic domains
RF-X
113493551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Collagen
Pox_D5
Motif
Other DBs
NCBI-GeneID:
113493551
NCBI-ProteinID:
XP_026727371
UniProt:
A0A7E5VGK8
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All DBs
Position
4:5692155..5705457
Genome browser
AA seq
1405 aa
AA seq
DB search
MDSTNPFQPWATDDSAKNVKTERELVDDAKLHRENVNHPKHRQTASYNKESVAVPSNAPG
SSSATASGGEAAPEGESKMDSSKIASIQQIVENTLSQEGRQRVTQLLEAVEALSGAERLL
LYLRLPTGVPLHDPLKQPINPLGSRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHC
MSSNMKPLSTADFGKVMKQVYPTVRPRRLGTRGNSRYCYAGLRKKIKLEVPQLPDLGESS
KICLEPFAPSRETERIVCDWAESKLGIKFANISELSRHLASAGTQLAPPGPASASPPPQL
VQPHAPADDTTSRQLIKHLKRKIQTQGTPGRPKKNKGQDVSGESPPSTSYASHHQPMKHE
SEVLPDMSYGYGQAAYVPVYDVRPPLAQYVPPPRAHPPHGPLAQHGPLPPHVSHAPHPPH
TPHPPHVPSAPHPAIPMHDYRPDPYVFEPSYAPRDLTRPADTTHNLPINLSSDASLDLST
ERTDWQRRRPPEPPPARLALPGKKLILETYHSETRASSPRSSQTDTRSHHVTEDFPRTEY
LPKKMRAAEILGGKIAAARQALAGPPAPTAIAGPAGLSGASGLPGPAGLSGPGGLSGSVG
PPTSDPACSSAPAPADAPVRPEVAFLEDPKNLTSRSKSTAAALAREEQEAASPTRSVKAP
TSKSEQLRNKLRKSSGRASGPSPDRAGSPDRTVTPDSCCGLDGINIRTGMICEEKHSEIL
NRERVISICNIDKHDLDDYLNEGNSQEHEEELLQYFHHRANQSEAQANTSTSANTAAFLE
RGQDPHDDHSQGNSEKISQLRELLAKNLKNQSGSSSQNMQLNQESQLTQEKSNEPPLTKP
TISEGAFKPLGPNDSEINGPTLPNQADLNSNKHAKSVPNQNGTSVPYANDSTTNQVPTNV
GGPHLYNGHCHNEPQSPTTRTQQYDFVPISDGCHSPGNFHSKSPIGFGQRGQSPTKVGKP
IIMGGSLQTSPISHSTAASPFVSPRNTPVPRSRLCPRPIPKHNGRKRRNPLQLGVTDPCS
KQFAIPNDQKFMTKSVVCGAGKYCQPISAPPSPNILSQYKNHMYTCSSGMSNGANNLCLN
FLPNAPFRDHVNGEQPLSADPLSSEVSQFFQESLVSYRSGTDTFRSQSVPLKQAIGNMGL
LSYNNTPVGSVPPTPVPNEFCDFGSLVDTCTRETLDKIYDAIDSSNDVLTTSATQSILNS
NDTLSNGCEPIPEHQILSDEQLTSIIPGGDDLLERTNQYNQSFTNDSATADNVEDFLKRA
NSIEFDLSELVTDKNKYYTSRSVPSTPLPYKRTAPNLQIDSRRSRELFAAENFSNASNGI
SSKSVPSTPQFAEDRSVFSYSNRDFLINGNSVCGSTQLHETVVENDQGLTSPLHDMLRED
ILVEPLTPALLADLDKMDATPYVDL
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacaaatccatttcaaccttgggccactgacgatagtgcaaaaaatgttaaa
actgaaagagaactagtggatgacgcgaaacttcatcgggaaaatgtcaatcatccaaaa
cataggcaaactgcgtcttacaataaagaaagtgtcgccgtcccaagcaacgctccggga
tcatcgagcgctacggcctccggcggcgaggccgcgccggaaggcgagtccaagatggac
tctagtaaaatagcttctattcaacaaatcgtcgagaacaccctcagtcaagaaggcagg
cagagagtaactcagttactagaagcagtagaagctctaagtggtgcagagagacttctt
ctgtatctacgtttgcccaccggagtgcctctccatgatccccttaaacagcccattaat
ccactaggctcacgggctgagcttcagcagactgtaacttggatacagacacacttagaa
gttgacccggatgtttcactacccaagcaggatgtatatgatgaatatattgcacattgt
atgagcagtaacatgaagcctctctccactgcggacttcgggaaagtaatgaagcaagtg
tatccgactgtacggcctcgtcgactgggcactcgtggcaactctaggtattgttacgcg
ggccttagaaaaaagattaagttggaagtgccacagctacccgatttgggtgaatcatcc
aagatatgtttggaaccatttgcaccttcgagggaaactgaaaggattgtctgcgattgg
gccgaatctaaattaggcatcaaatttgcaaatatttcggagctatcgagacacttggcg
tcagcgggtacacagcttgctccgcccggtccagccagcgcgtcgccaccgcctcaactt
gtgcagccacacgcacctgcagatgatacaacaagtcgacagcttatcaagcatcttaaa
cgaaaaatacagactcaaggtactcctggtcggccgaaaaagaacaaaggtcaggatgta
tccggagagtccccgccgtctacgtcatatgcgagccaccatcagcctatgaaacacgag
agcgaggtgctgcccgacatgagctacggctacgggcaggcggcctacgtgcccgtgtac
gacgtgcggccgccgctggcgcagtacgtgccgccgccgcgcgcgcacccgccgcacggc
ccgctcgcgcagcacggcccgctgccgccgcacgtgtcgcacgcgccgcacccgccgcac
acgccgcaccccccgcacgtgccctccgcgccgcaccccgccattcctatgcacgactac
cgacccgacccctacgtattcgaaccgtcatatgctccgcgcgatctcactcgccctgcg
gacaccacacacaatctaccgattaatttaagcagcgacgcgtccttagatctatctaca
gagcggacggactggcagcgacgaaggccaccagagccaccaccggcgcgtctcgcactt
cctggcaaaaagttaatactagaaacgtaccacagtgaaacgcgagcaagttccccacgc
tcttcgcaaacggatacacgctcacaccatgttactgaagatttcccacgaaccgagtat
cttccgaagaaaatgcgagctgccgaaatattaggtggtaaaatcgctgcggcccgtcag
gcgttagctgggccacccgcgcccacagcgatagctgggcctgctggcctgtcgggagca
agtgggctgccagggcctgctgggttgtcggggccgggaggcttgtcagggtcagtcggg
cccccaacttcggatcccgcgtgcagttccgcgcctgcacccgccgatgctcccgttcgt
cccgaggttgcttttttggaggatccaaaaaacttaacgagccggtccaaaagcaccgcc
gcggcgctggcccgggaggaacaggaggcggcgagtcccacacggtcggtgaaggctccg
acgtctaagtccgaacaattacgcaataaactacggaaatctagcggccgagccagtgga
ccctcgccggatcgggcgggatcgcccgatcgaaccgtgacgcctgattcgtgttgcggt
ctagatgggattaatattaggactggaatgatttgcgaagagaaacactccgaaatccta
aacagagaacgtgtaattagtatatgcaatatagataaacatgatttagacgactatttg
aatgagggtaatagccaagagcacgaagaagagcttctacagtattttcatcatcgcgcc
aatcagtcggaagcccaagcaaatacaagcacctctgctaacactgctgcttttttagaa
cgaggccaggacccacacgacgaccatagccagggaaatagtgagaaaatatcacagcta
agggaattattagctaagaatttaaaaaaccagagtgggtctagttctcaaaacatgcaa
ttaaatcaggagtcacaattaactcaagaaaagtcaaatgagccaccacttactaaacca
acgatttctgaaggcgcgtttaaacctcttggtcctaatgattcagaaataaatggtccg
actttacctaaccaagccgatttaaatagcaacaaacacgctaaatctgttccaaatcaa
aatggcacctccgtaccttatgctaacgatagtacaactaaccaggtacccacgaatgtc
ggcgggccacatctttacaatggccactgtcataatgaaccacagagtccaactaccaga
acacaacaatatgattttgttcctatttcggatggatgtcattctcccggtaatttccat
tccaaatccccaataggctttggtcaaagaggtcaaagtcccacaaaagtaggcaaacca
attatcatgggtggttccttacagacatctcctatttcacatagcactgcggcgagccct
tttgttagtccaagaaatactccggtcccacggtctagactatgcccgcggccaataccc
aaacacaacggaaggaaaagacgcaatcctctacaacttggtgtcaccgatccatgctcg
aaacaatttgctatacccaacgaccaaaaattcatgaccaaaagtgtagtttgtggcgcg
ggcaaatactgccaacccatttcagctccaccgtcgccgaatatactctcacaatataag
aaccacatgtacacgtgctcttcaggaatgtctaatggcgcaaataatctttgtctaaat
tttttacctaatgcaccgtttcgcgatcacgtcaatggagaacaaccactgtctgccgat
cctctatcaagtgaggtcagtcagtttttccaagaatcactagtttcttacagatcggga
acggacacttttaggtcgcaatccgttcccctgaaacaagcaattggcaatatgggatta
ttaagttacaacaatactccagtaggctctgttccgcctacaccagtccctaatgaattt
tgcgactttggatctcttgttgatacttgtactcgagaaacattggataaaatatacgat
gccatagacagcagcaacgacgtccttacaacaagtgccacacagagcattttaaattct
aacgacaccctaagtaatggttgtgaacccattcctgaacatcaaatactgtcggatgaa
caattaacctcaataataccgggtggggacgatctgcttgagagaaccaatcagtataac
caatcattcacaaacgacagcgccacagctgacaacgtagaagatttccttaaacgagcg
aatagtattgagtttgacttatccgaattggtaactgataagaataaatactatacatca
cgatctgtcccgagtacaccgctgccatacaaacgcacagcgccgaatctgcaaatagac
tcgcgacgttccagggaattatttgcggctgaaaatttctccaacgcatcaaacggcatt
tcctctaaatctgtgccatccactccccagtttgcagaagataggagcgtgtttagttac
agtaacagagattttctgattaacggtaattctgtatgtggatccactcaacttcacgaa
actgtagtggagaacgaccagggattgacgtccccacttcacgatatgttacgggaggac
atacttgttgaaccgttgacgcccgccttgctggccgacctcgacaaaatggacgcaact
ccgtatgtcgatctctag
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