Trichoplusia ni (cabbage looper): 113493779
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Entry
113493779 CDS
T05757
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113493779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113493779
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113493779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D3
Nrap
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
113493779
NCBI-ProteinID:
XP_026727595
UniProt:
A0A7E5VH03
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Position
5:complement(17299431..17307720)
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AA seq
1114 aa
AA seq
DB search
MVKRNIKTPISEDVGVSKILNENGKRAADDEPKDAPKRVRTKSLYRQPTVNELNRLQETE
SLFNSNLFRLQVDEIIQEVKVKEKTEKKFQQFFTELKTHLLAIPDDDTEYDLSTNTLAKK
LKLKIPVNEQLMTTKCVFQFHKFSDVEIKGSYGLGCSINSKLRVDLQITVPSETYTKNDS
INYKYHKKRAAYLACIASHLSKLDTIEDLQYSYVNSCETKPVLDFKPVGKLGNHLSVRIH
LVCESDAYKLNRFSPDRNNLREAWLFKDDSENSTEIGPPTPYYNSSVLADLTASTNQEFL
NEFLPKSDNLKQAAVLLKIWLRQRNLPVSGYVVCLLVAYYVQIKRINNIMSSYQIVRNIW
IALKASELDTKGISLHKGDSAPSIDDFHKHFPVVFVDKTGYYNILWQMNRGTYSALKREC
ALAVEMLDNGKINSFLPLFMTPVRPLMKFDHLLRFKNLSQIKESVLSKTSRESKVNYGVE
QLSLVADVLYTLLAKGLGNRVDLIQPIIEDDFSWPIKKTLDKARAGVDPKLSFGFILNPE
NAMNVVEKGPPANLPEAEQFRAFWGDKSELRRFQDGSITETCVWEGEAQAERRTVTKQIV
DYLMKLKYGIAPSQLFQVSWQLEGLLARRGAGAGPEEGSLRALQAFDLLRRDLRQLTQLP
LDISAVYGVSPIFSYSCPVPALPRAAPHNPWKRGNSCLVKDITRDGLPVLPEYTPVCKAV
VELGHSGKWPGEIHAFRCLKAAFHLQIAESLTKQYSLPTQASPTHIDVLKNGLVFRLEIA
HPKEITLLRREKENGVVKYRESEESERLQNETVLLPKLRGALHGLHQKHPSFGATCCLFK
RWLSSHLLSDPHFPCLVADLMVAAVFLQPQPSQPPASPTVGLYRVLRLLTDFDWARDVIV
LDFNDDLTREDITKLEQQFSPESPGSPRIVSAYDPPGLARPRPDARVLARARALAAATLR
YVEGSLLTEYRDNILPMFVPSLAGYDVLIHLHRPLVPHCLERVDSPPRLQKLPETPGHEV
IPVVEFHPVLKYLEELRSAYSEFALFFHDLYGGEVIAVLWTPDIKEDREFQLTNATGLKP
IPSKGETKYRVNVQALIEDFRILGQGLVKDITVN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacggaatattaagacccctatttctgaggacgttggagtgtctaagatcctc
aatgagaatggaaaacgagctgcagatgacgaacctaaagatgcgccaaaacgggttaga
acgaagagtttatatcgacaacccacagttaatgaattaaatagattacaggagacagaa
agtctattcaactctaatctatttaggctacaagtcgacgaaattatccaggaagtaaaa
gtgaaagaaaaaacagaaaagaagtttcaacagtttttcacagagttaaaaactcattta
ctagcaatacctgatgacgataccgagtatgacttatcaacgaatactcttgcaaaaaag
cttaaattaaaaatccctgtgaatgagcagttgatgacaacaaaatgtgtatttcagttt
cataaattttctgatgttgaaattaaaggttcatatgggctaggatgttcaataaactcc
aaactcagagtagatttacagataactgtgccaagtgaaacatacacaaagaatgactca
ataaactataaatatcataaaaaaagagctgcgtatttagcatgtattgcttcacactta
tctaagttagatacaattgaagatctgcagtattcctatgttaacagttgtgaaacaaaa
ccagtcctagatttcaaacctgtgggtaaacttggcaaccacctttcagtacgtattcac
cttgtttgtgagagtgacgcatacaagctaaatcggtttagccctgaccgcaacaacttg
cgagaagcatggttgtttaaagatgactctgaaaacagtactgaaattggtcctccaaca
ccgtattacaacagtagtgtactagcagacttaacggcttctacaaaccaagaattttta
aatgaattcctaccaaaaagtgacaatttaaaacaggccgcagtgttgttgaaaatatgg
ttacgtcaaaggaatctaccagtatcgggatatgttgtatgtttgttagtggcatattat
gtacaaatcaagagaataaacaatattatgagcagctatcaaattgtgcggaacatttgg
attgctttaaaagcatcagaactcgacacaaaaggcatatcactccacaaaggtgactca
gcgccatctatcgacgacttccataaacacttccctgtagttttcgtagacaagactgga
tactataacatactgtggcagatgaaccgaggaacttattctgcgttgaaaagggagtgt
gcattggctgtggagatgttggataatgggaagatcaatagcttcctaccgttattcatg
acacctgtcaggcctttgatgaagtttgatcacctgttgagattcaaaaacctatcacag
ataaaagaatcagtgttatctaagacctccagggagtctaaagtgaactatggtgttgaa
cagctgagcctggtagctgatgtgctgtatactctgttggctaaaggactgggcaacaga
gtggacttaatacaacctatcatagaggatgacttttcttggcccataaagaagaccttg
gataaggcaagggctggggtagacccaaaattatcatttggcttcatactcaacccagaa
aatgctatgaatgtggtggagaaaggacctcccgccaacctgcctgaagccgaacagttc
agggcgttctggggcgacaagtctgagctccgtcgcttccaggatggctccataacggag
acctgcgtgtgggagggggaggcccaggctgagaggcggactgttaccaagcagatagtc
gactacctcatgaagcttaagtatggcatcgccccctcgcagctgttccaggtgtcgtgg
cagctggaggggctgctggcccggcggggggcgggcgcgggcccggaggagggctcgctg
cgcgcgctgcaggccttcgacctgctgcgccgcgacctgcgccagctcacgcagctgccg
ctcgatatcagcgctgtgtatggagtgtccccaatcttcagctacagctgtccagtcccg
gccctgccccgcgcggcgcctcacaacccctggaagagaggcaacagctgccttgtcaag
gacatcaccagggacgggctgcctgtactgccggagtacacgcccgtctgcaaggcggtc
gtggaactaggtcacagcggcaaatggcccggcgaaatccacgcattcagatgtctaaag
gccgccttccaccttcagatagcagaatccctgaccaagcaatactcattaccaacacaa
gcctcacctacacacatagacgttttaaagaacgggctcgtattccggcttgagatcgcg
cacccgaaagagataacgctattgaggagggagaaggagaatggggttgttaagtataga
gagagtgaagagagtgagaggcttcagaacgagactgtgctgctgccgaagttgaggggg
gcgctgcacgggttacatcaaaagcacccgtcgttcggcgcgacgtgttgcctgttcaag
cgctggttgtcctcgcacctgctctccgaccctcacttcccgtgcctggtggccgacctg
atggtggccgccgtgttcctgcagccgcagccctcccagccaccagcctcgcccactgtt
gggctatacagggtgctacggttgttgacggactttgattgggcaagagatgtcattgta
ctggactttaatgatgatttgactcgtgaagacataacaaagctagagcagcagttctcc
ccggagtccccgggcagtccccgcatagtgtcggcctacgaccccccggggctggcgcgg
ccgcggcccgacgcgcgggtcctggcgcgcgcgcgggcgctggccgccgccacgctgcgc
tatgtggagggcagtctgctcacggagtacagggacaacatactgcctatgttcgtcccc
tccctggcgggctacgacgtgctcatccaccttcaccggccgctggtcccgcactgcctc
gagcgcgtggactcccctccgcggctgcagaagcttccagaaacacccggccatgaagtc
atacccgtcgtcgagttccatcccgtcttgaagtacctggaagagctgaggagcgcgtac
agtgagttcgctttgttcttccacgacttgtacggaggcgaggtgatagctgtgctgtgg
acacctgacattaaggaggatagagagtttcagttgacaaatgcaacaggtctgaagcca
ataccaagtaagggcgagactaaataccgcgtgaacgtgcaagctctgatagaagacttc
aggatactaggccaaggactcgtcaaggatattactgttaactaa
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