Trichoplusia ni (cabbage looper): 113494046
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Entry
113494046 CDS
T05757
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113494046
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Gene silencing
Transposable elements
113494046
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
DDE_Tnp_1_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
113494046
NCBI-ProteinID:
XP_026727982
UniProt:
A0A7E5VI33
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Position
5:2541204..2546729
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AA seq
350 aa
AA seq
DB search
MSSSESDREIMALLSDEDTDQEVGLRIYKQRIDYFSVLDNQEFQLRFRLDKPAVEQLLSE
IYPNLRVKGRRNHGIPPIHQLLLTLRYYALGTMLLSVADFIGVSKTSACRIVFDVSCAIA
RLYNTYIRMLPNTEQDFYNISRFPRVLGALDGTHIRIQSPCSQIGEEFRNRKGYFSINVQ
AVCDANLLFMNVVARWPGSAHDATIFNNSELRAQCESGLFGNKWLLGDSAYPLKSYLLTP
LLNPQTQSQQLYNEAHIRTRNCIERCFGVWKRRFPIVALTMRLSLSRANAVIIATAVLHN
ICRLRSLSDIPPEVEILDADVPSPSYNESSNQTGTTERDNLITQYFNNLI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctctgaaagtgatagagaaatcatggctttgttatcagacgaagatacggat
caagaagtgggattaagaatttataaacaaaggattgattatttttccgtgcttgataac
caagaatttcagctgagatttcggctcgacaaacccgctgtggaacaattactcagtgaa
atttatcctaatttaagagtgaaaggaagacgaaaccatggaataccaccaatacatcag
ttgctgcttactttacgttattatgcactaggaacaatgttattatcagtagctgatttt
ataggtgtgtcgaaaacatcagcttgtcgtatcgtatttgatgttagctgtgctatagca
cggctatataacacatatattcgcatgctcccaaacactgagcaggatttttataatata
tcacgctttccacgtgttcttggagctcttgatggtacacatattagaattcaatcacca
tgttctcaaattggagaagaattcagaaatagaaaaggctactttagcattaatgtgcaa
gctgtatgtgatgctaatttattgtttatgaatgttgtggcacgttggcctggttcagca
catgatgcaacaatatttaataattctgaactgcgagctcaatgtgaaagtggcttattt
ggcaataaatggttacttggagatagtgcatatccactaaaatcataccttttaacacct
ttgttaaatccccaaacacagagtcaacaactttataatgaagcccatattcgtactagg
aactgtattgaaagatgttttggagtttggaaacgaagatttcctattgtagccttgaca
atgcgcctaagcctctcaagagccaatgcagtgatcatagcaacagcagtactccacaat
atttgccggttgagaagcctcagtgacataccaccagaagtggaaattctagatgcagat
gtaccttcaccaagttataatgaaagttcgaatcagactggtactacagaaagagataat
ctaatcacacaatattttaacaacttgatatga
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