Trichoplusia ni (cabbage looper): 113494093
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Entry
113494093 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113494093
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113494093
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Helicases
113494093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
ResIII
nSTAND3
AAA_19
HA2_N
T2SSE
ATPase
AAA_30
Flavi_DEAD
Helicase_RecD
AAA_25
Motif
Other DBs
NCBI-GeneID:
113494093
NCBI-ProteinID:
XP_026728043
UniProt:
A0A7E5VI89
LinkDB
All DBs
Position
1:9970171..9983529
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AA seq
1192 aa
AA seq
DB search
MGKSRYNAKARQVVKTNIDNSQTNEIHVEFASNEYGSTDASNLLALPSKKRESKVVKDKK
EKTRFLSKAQRKRLEKIVEKKKKKENRASLLESLAQVQATPEEVSRLTGISTYQTIGLRK
VNELNSEFPTQEVLVNTEQKKFSSIAGAKKRLRLLKLDKEEKIKKKKYDPNVVGLEESSD
ESSSGSDNDDDDDDDPEIVNGHDSKEESTVNGPEKNETTEIIEVKDETTKTEEILPENNK
KSDKKTKNASKNDEKGPEVKVEKKPLLDHPTVNVQVKRDPKIQVARLKLPILGEEQRIME
LINENEFLIVAGETGSGKTTQIPQFLYEAGYAEHKMIAVTEPRRVATVAMAARVGHELGL
TSKEVSYLMRFEGNVSKDTKIKFMTDGVLLKEIQSDFLLSKYSVVIIDEAHERSVYTDIL
LGLLSRIVPLRRKRGSPLRLIIMSATLRVEDFTENTRLFKEPPPVIKIDSRQFTVTTHFN
KNTYSDYLKEAYKKAVKIHTRLPEGGILIFVTGQQEVNYLVRKLKASFPYRKDMDYSKLI
NKTKPVSAAEAELDSEPEDIESDDDEVEKEMKRARKARRKAKLKSKALPKINLDDYDMPE
DDGQADLVGDDEDSEGHLSDSDAEEDTLTSAIKSCRQPLWVLPLYSMLNSAKQARVFAPA
PVGARLCVVSTDVAETSLTIPAVRYVVDTGKKKMRVYDHATGASAWRVVWTSRASAEQRA
GRAGRVGAGHAYRLYSSAVFQHDCPDHHPPDLCRRPVDDLLLTMKCMGIDKVVNFPFPTA
PDRMQLRLAEKRLETLGILEKPPMRNTKKGEEEVLKVTPLGKAVSAFPLLPRYGKMLALS
HQQNLLAYTIALVSALSVPEVMSGKPDSWPATGHVQLLGDPGVLLRAVGAAEFAYVKGEE
DIFCAKYGLREKAIKEIRKLRKQLTSEINLSVAGVDVAVDPEMRPPTDDQARLLRQLVLS
GLGDQVGKKIALEEVKQGEDKRKFKYAYHCGELEEPVHLHSDSILRKTIPEWVVFQELYE
TGAEERRKMVMRNVTAIEPEWLPLLVPQMCNLGDPLDEPPPAYDQKSGRVKCHFKGTFGK
AGWELPTVEVDFPEKIERYRWFARFLLEGSVFPKLRKYTSSLLSPPSTMVKSWARLQPRT
ELLLEALIRRRAGTRDALQNAWEENKTYLLDEYLKWVPESAHNEVSLYWPPM
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcacgctataacgctaaggcgcgtcaggtcgtcaagactaatatcgataac
tcacaaactaacgagatccatgttgagtttgcatctaatgaatatggttcaacagacgca
agtaacctccttgctctgccctccaagaaaagggagagtaaagtcgtcaaagataaaaag
gaaaagacaagattcctgtctaaagcccaaaggaaaaggcttgaaaagattgttgaaaag
aaaaagaagaaggaaaatcgggcatcactccttgaatctctagcacaagtccaagcaaca
ccagaagaggtcagtcgcctgactggcatatccacataccagactataggtctcaggaaa
gtgaacgaactgaactctgaattcccaacgcaggaggttttggtgaatacggagcaaaag
aagtttagtagtattgctggtgcgaaaaagcgtctacgccttctaaaacttgataaagaa
gagaagataaaaaagaagaaatatgatcctaatgttgttggcctagaagaatcatcagat
gaaagctcttctggatctgataatgatgatgatgatgatgatgaccccgaaatagtaaat
ggacatgattcaaaagaagaaagtactgtaaacggtcctgaaaagaatgaaacaacagaa
ataatagaagtaaaagatgaaactactaaaacagaggaaatacttcccgaaaataacaag
aaaagtgataaaaagacaaaaaatgcttcgaaaaatgacgaaaaaggtcctgaagtgaag
gttgaaaagaaaccattgctggatcatcctactgttaacgtgcaagtgaaaagagaccca
aagattcaggtagcaagattgaaattgccaatacttggtgaggaacagagaatcatggag
ttgattaacgagaatgaatttctgattgttgctggtgaaacaggcagcggtaaaacaacc
caaatcccccaattcctgtacgaagcaggttacgccgaacacaagatgattgccgtgacg
gaaccgcggcgagtcgccactgtcgctatggcggcccgagttgggcatgagttgggtctg
actagcaaagaggtctcgtatttgatgcggtttgaaggaaacgttagtaaagatacgaag
atcaagttcatgactgatggtgtacttctaaaagaaattcaatctgacttcttattaagc
aaatattcagtggtcattatcgacgaggctcacgaaaggagcgtctatactgatatcttg
ttgggtctgttatcaaggattgtccctttaaggagaaaacgagggtcacctttaaggctc
atcatcatgtctgccactttaagggttgaagactttacggagaatactagattgtttaaa
gaaccacctcctgttattaagatagactcgagacagttcacagtgaccacgcactttaat
aagaatacttacagcgattatttgaaagaggcgtacaagaaggctgtcaaaatacacacg
aggctgccagaaggggggatacttatatttgtgactggtcaacaggaggtaaactatctg
gtacgaaagctaaaggcatcgtttccttaccgtaaagacatggactatagcaagctgatc
aataagacgaagccggtatctgccgctgaagctgaactggattcagagcctgaggatatt
gagtctgacgatgatgaggttgagaaagaaatgaaacgcgcccgcaaagctcgcaggaaa
gctaagctgaagtctaaagctttgcctaagatcaacctggatgattatgacatgcctgaa
gacgacggccaggctgacctggtcggtgatgatgaagacagcgagggacatcttagtgat
tcagacgccgaagaagacaccctaacttctgccataaaatcctgccgtcaacctctatgg
gtgttgcctctgtactcgatgctaaactctgctaaacaagcgcgagtgtttgcccccgcg
ccagtaggggcccggctgtgtgtagtcagtactgatgtcgcagaaacatcacttactata
cccgctgtcagatatgttgtggataccggcaagaagaaaatgcgtgtatacgaccacgcg
acgggagctagtgcatggcgtgtggtatggacgtcccgcgcgagtgcggaacaacgcgca
ggtcgcgccggccgcgtgggcgcgggacacgcctacaggctgtacagtagcgccgtgttc
caacacgactgccccgaccatcacccgccggacctctgcaggcgacccgtcgatgattta
ctgctcactatgaagtgtatgggcattgataaggtcgtaaacttcccattcccaacggct
ccggatcgaatgcagctgcgcttggctgagaagcggctggaaaccctcggtatactggag
aaaccacccatgaggaataccaagaagggggaagaagaggtattaaaagtgacacctttg
ggcaaggctgtgtcggcctttcctctgctgcctcgttacggcaagatgcttgcgctgagt
catcagcagaaccttctagcatacaccatcgcgctcgtgtcggctttgtctgttcccgag
gtgatgtcaggcaagccagacagttggccggcaactggtcacgtccagttgttaggcgac
ccaggagtgttgctgcgagcagtaggggccgcagagttcgcctacgtgaagggcgaagaa
gacatcttctgtgctaaatatggacttagagagaaggcaatcaaagaaatccgtaaactc
cgaaagcagttgacatctgagatcaatctcagcgtggctggcgtagatgttgctgtagac
cctgagatgaggccgcccactgatgaccaagcccggctgctgaggcagctggtgctaagt
ggactgggagaccaggtcgggaagaagatcgcgttagaggaggttaagcaaggagaagat
aaacgaaaattcaaatacgcctaccactgtggcgagctagaagaaccagtacaccttcac
tcggactccatactccggaagaccataccagagtgggtggtgttccaggagttgtacgag
actggggccgaggagagacggaagatggtgatgagaaacgtgacggccatagaaccggaa
tggctgccgttgttagtgcctcagatgtgtaatttaggtgatcctttagacgaaccgcca
ccggcttacgatcagaagtcaggtcgcgtcaagtgtcactttaagggtaccttcggcaaa
gctggctgggagctgccgactgtagaagtagactttcctgagaagattgagagatacaga
tggttcgcccgttttcttctagaaggttctgtgttccccaagctgaggaaatacaccagt
tccctcctatcgccaccttcgaccatggtcaagtcctgggcgcgacttcagcccagaacg
gagttacttctagaagctttgattaggagacgagctggtacgagggacgctttacaaaat
gcctgggaggaaaataaaacttacctccttgatgaatatctaaaatgggtgcccgagtca
gcccataacgaagtctcattgtattggccgccgatgtaa
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