Trichoplusia ni (cabbage looper): 113494385
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Entry
113494385 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113494385
03009 Ribosome biogenesis [BR:
tnl03009
]
113494385
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113494385
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113494385
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113494385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
113494385
NCBI-ProteinID:
XP_026728501
UniProt:
A0A7E5VJX0
LinkDB
All DBs
Position
5:9153926..9161942
Genome browser
AA seq
793 aa
AA seq
DB search
MTTTTDTIPFIKTIHDGEEVENFSEESDEEIEYQPSKQKVKQKADFNPKFQFVGSVEEYN
KNPWDDLQKYVRRNVKQTLDQKIEKRRAQVKVHGNSNDVDTDSDVEAKDSDVGELEISDD
ELKRDEIKTKQRKITKKQKMQEALEDETEQGTRIEYDSDFFEEPPPYDENASFYMMNLSR
PLLKAIGSLNYVHPTPIQAATIPVALLGKDVCACAATGTGKTAAYMLPILERLLHKAGGA
ARVTRVLVLVPTRELGAQVHAVTRQLSQFTPVTIGLSVGGLDVKYQETVLRHNPDIVIAT
PGRLIDHIRNTPSFGLQSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMS
EQVKDLAAVSLKKPVKLFVDSNKDVAFNLRQEFVRIRRERECDREALLAALVCRTFRDRA
VVFVQTKRQAHRLHVALGLLGVKVAELHGALNQPQRLDSLKRFREEQVDVLVATDVAARG
LDIPGVKTVINFTLPATLEHYIHRVGRTARAGRAGVSVSLAGEAERGLVKAIVKRARRPV
KSRQLPPDIVAKYRDRLARLETEISAILDEEYAEKQMNKMEKQTAKLEGAIKTEDGPRIE
PQRQREWFQTPREKREEKERLALTRHPDQDKKKGGKGKKRKRDDDDDDSGDDTRKKKRPT
KHKPKDTPEDRVNREMEKVALLQSRMEKRKKKQRRIRAVDDNDDLPKQRPKTANKSKKKQ
SNFATDLTDTSRTAAKRLRYDANKAQKGKGMQKGKPKDKGKGKPKAFGKPQMGKKPQGGR
NPQAGKGGRRKNK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacgacagatacaattccgtttattaaaactattcacgatggcgaagaagtc
gagaatttctcagaggaatctgatgaagaaattgaatatcaaccgtcgaagcagaaggta
aaacagaaagcagacttcaatcctaagttccaatttgttggttcagttgaggaatataat
aagaatccatgggatgatctgcagaagtatgtcagacgtaatgttaagcagacactagac
cagaagatagagaagagaagagcacaagtaaaggttcatggaaactctaatgacgttgac
acagactccgatgtggaagctaaagacagtgacgtgggtgagctggagatatcggacgat
gaactcaaaagagatgaaattaaaactaaacagaggaagatcactaaaaaacaaaaaatg
caagaggccctcgaagacgagacagaacaaggcacccgtatcgagtacgactcggacttc
ttcgaggaacctcctccgtacgacgagaatgcatccttctacatgatgaacctgtcccgg
ccgctgctcaaggcgataggctcgctcaactacgtgcaccccacgcccatacaggctgcc
actataccagtggcgttgctcggcaaggacgtatgcgcgtgcgcggccacgggcacaggt
aagacggcggcctacatgctgcccatcctggagcggctgctgcacaaggcgggcggcgcc
gcgcgcgtcacgcgcgtgctcgtgctcgtgcccacgcgcgagctgggcgcgcaggtccat
gcggtaacgaggcaattatcacagttcaccccagtcaccatcggtttgtccgtcggtgga
ttggacgtcaagtatcaggaaacagtgctccgtcacaacccggacatagtgatcgcgacc
ccggggcggctgatcgaccacatccggaacacgccgtccttcgggctccagtccatcgag
gtgctggtgctcgacgaggctgacagaatgctggacgaatacttcgcagagcagatgaag
gagatcatccgtcagtgctcccctaagcggcagaccatgctgttctcagccaccatgagt
gagcaggtcaaagacttggctgccgtctctctcaagaagccggtgaagctgttcgtggac
tccaataaggatgtagcgtttaatctgaggcaggagttcgttaggatccgccgcgagcgc
gagtgtgaccgcgaggctctgctggcggcgctggtgtgccgcacgttccgcgaccgcgcc
gtcgtgttcgtgcagaccaagcgccaggcgcatcgcctgcatgtcgcgctgggactgctc
ggggtcaaggtagcggaactccacggcgcgctgaaccagccgcagcgcctggactcgctg
aagcgcttccgcgaggagcaggtggacgtgctggtggccacggacgtggcggcgcgaggc
ctcgacatccccggcgtcaagactgtcatcaacttcacgctgcccgccacgctcgaacat
tatatacacagggtgggtaggacagcgcgagcgggtcgcgcgggcgtgtcggtgtcgctg
gcgggcgaggcggagcgcggcctcgtcaaggccatcgtgaagcgcgcgcggaggcccgtc
aagtcgcgccagctgccgcccgacatcgtggccaagtaccgggaccggctggcgagactc
gagaccgagatatctgcaatactagacgaagaatacgcagagaaacaaatgaataagatg
gagaaacaaacagcaaagttagaaggagccatcaagacggaggacgggcctcggatagag
ccgcagcggcagagggagtggttccagacgccgcgcgagaagagagaggagaaggagagg
ctggcactcacacgacaccctgaccaagacaagaagaaaggcggtaagggtaagaagcgc
aagcgagacgatgatgatgatgactcgggtgatgacacgcgcaagaaaaagcgccccacc
aagcacaagccgaaggacacgccggaagacagggtcaacagggagatggaaaaggtcgct
ctcctccagtcccgtatggaaaaacgcaagaaaaagcaacgtaggatacgcgcagttgac
gataacgacgaccttccaaaacaacgccctaagacagctaacaaaagcaagaagaaacaa
agcaacttcgccacagacctcactgacacgtcccgaaccgcggccaaaagactccgatac
gacgctaacaaggctcaaaaaggcaaaggcatgcagaaaggcaagcctaaagataaagga
aaaggcaagcccaaggcgttcggcaagcctcaaatggggaaaaagcctcaaggggggaga
aatcctcaagcgggaaagggggggcggaggaaaaataaataa
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