Trichoplusia ni (cabbage looper): 113494392
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Entry
113494392 CDS
T05757
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113494392
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113494392
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113494392
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
113494392
NCBI-ProteinID:
XP_026728511
UniProt:
A0A7E5VJX9
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Position
5:complement(9229619..9238317)
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AA seq
941 aa
AA seq
DB search
MSKKLNNMKWESVALDGFPVSMADKGFMGLEECTDYNFDKEKKRSKKTKLKEKKEQKKPK
NNKRKAEPSKDEPKEVPSKKVKLSNGFVVESCETVSPTLGNNVKTNSKKNANKTEEGAKK
SKNKRNKKKKGDTNTEETTDNKPVKKSKQKLGDLPQSTSELTAEDMLTWAEFKLQEPILR
ALTELGFKQPTKIQQLTLPAAIHGRRDILGAAETGSGKTLAFGLPILSGILKLKEKALQK
GLDVYDIPYKKPSNKKKDEPAPKGKKDKFKKKDKKKPEKKEKVEEVKVKESSEDGYSSGE
ESNNDGDEPKKEYNDDDYLEEIVVPYKKKENSADEGNDSDDSDNYIHLSDMLDSDDLAET
SDENDEGDEESGAEAGSGDEGSDAEAGSGEDDIDEDDLGLEEIDGDAGSDVSGEADDEEL
DDQGDEDEVDENEQGIGCVKVLDNIEIPGHVSMKTGKPLYALIITPTRELAIQISRHLVA
VAKYTGIKVATIVGGMAAVKQERVLRSGPEVVVATPGRLWELVGQGQPHLQQLDTVKFLA
IDETDRMIERGHFEELQPLLERLNADEERSAARQNFVFSATLTMVHDLPTHMKGKKVTQR
GKIINRKIEKMTPQQKVNRLIKMLGMTEPKVVDITTQNLGTAETLTESRITCAMEHKDAY
LYYIVKRHPGRTIVFCNSIGSVKRLAQLFTLLKCRPLPLHASMPQRQRLKNLERFRDDPH
GILIATDVAARGLDIPCVEHVVHYQVPRTAENYVHRSGRTARASREGLTILMMEPAEAYL
YSKMCRTLNKTSEVPTFPVDAQILAPLKDLMVVARELDGLELKKRRAAQSQGWKEKAARE
MDMLIDDDDVPVKQVDASIEKALKAKRRQLEGLLSRPIYPRGFSFKYPTLNTATAFTGSE
DNALEVMKKALASGQLKKEKRKTKNAPLLQLQKKKFKKAKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaactaaataatatgaaatgggaatccgtggccttggatggttttcccgtt
tctatggctgacaaaggatttatgggcttggaagagtgcacagattataatttcgataaa
gaaaaaaagcggtccaagaagacaaaactaaaagagaaaaaagaacagaagaaaccaaaa
aacaacaaaagaaaagcggagccttcgaaagacgaacccaaggaggtaccaagcaaaaag
gttaaacttagcaatggttttgtagtagaatcttgcgaaactgtttcaccaacattaggc
aataatgttaaaacaaatagcaagaaaaatgccaacaaaacagaagaaggtgctaagaaa
tctaagaataaaaggaataaaaagaagaaaggtgacactaacacagaagaaactacagat
aataaaccggttaagaaaagtaaacagaagttgggagatctaccacagtctacttcggag
ttgaccgcagaagacatgctgacgtgggccgagtttaagctgcaggaaccaatattaaga
gctttgacagaattgggttttaaacaacctactaagatacagcagttgaccttaccagca
gctatacatggacgcagagatatcttaggtgctgcggaaaccggtagtggtaaaactcta
gctttcggtcttccaatcttatcgggtatattaaaactcaaagaaaaagcattacaaaaa
ggcttagatgtgtatgacataccatacaagaaaccatccaacaagaagaaagatgaacca
gcaccaaaaggtaagaaagataagttcaagaagaaagataagaagaaaccggaaaagaag
gagaaagtagaagaagtaaaagtaaaggaatcgtcagaagatggctacagcagtggtgaa
gagagtaataatgatggtgatgaaccaaaaaaagaatacaatgatgatgattatttagaa
gagattgtagtgccttacaaaaagaaagaaaattcagctgatgaagggaatgacagtgat
gatagtgataattatattcatctatcagatatgctggattctgatgatctagccgaaacc
agtgatgaaaatgacgagggtgatgaagaaagtggtgcagaagctggaagcggcgatgaa
ggaagtgatgcagaagcaggcagtggtgaagatgatattgatgaagacgatctaggttta
gaagagattgatggtgacgctggtagtgatgtaagtggagaggctgatgatgaagaattg
gatgatcaaggtgatgaagatgaagttgatgaaaatgaacaaggtataggctgtgttaaa
gttttagacaacattgagataccgggtcacgtatccatgaagacaggcaagccgctgtac
gctctcatcatcacgcctaccagggaactggccatacagatcagcagacatcttgtggct
gtagctaagtatacaggtataaaagtggccacgatagtgggtggtatggcggctgtgaaa
caagagagggtgctgcgatcaggacccgaggtggtggtggcgacacctggccggctgtgg
gagctggtgggtcagggacagccgcatctgcagcaactggacaccgtcaaattcctagcc
atcgacgagaccgaccgcatgatcgagcgcggccacttcgaggagctgcagcctctactg
gagcgactcaacgcggacgaggagcgcagcgccgccagacagaacttcgtgttctctgcc
acgctgaccatggtgcacgacctgccgacacatatgaagggcaagaaggtaactcaacga
ggcaagataataaacaggaagatagagaagatgactcctcagcagaaggtaaacagactg
atcaagatgttgggcatgaccgagcccaaggtcgtcgatatcaccacgcaaaacttaggc
acagcggagactctaacggagtcccgtatcacgtgcgctatggagcacaaggacgcgtat
ctctactacatagtgaagcggcaccccggcaggactatagtgttctgtaactctatcggc
agtgttaagagattagctcaactatttacattgctcaagtgtcgccctctaccactacac
gcgagcatgcctcagagacagaggctgaagaacttagaaagattccgcgacgatccccac
ggcatactgatagctacagacgtggcagctcgcggtctggacataccctgcgtggaacat
gtcgtacactaccaagtgccgcgaacagcggagaactacgtacacaggagcggccgcacg
gcgcgggccagccgggagggcctcactatactcatgatggaacccgccgaagcgtactta
tatagcaagatgtgtagaacactcaataaaacatcagaagtgccaacattcccggtggac
gctcaaatcttggcccccctcaaggacctgatggtggtagctcgggagctggacggcttg
gagctgaagaagaggcgggctgcacagtcgcagggctggaaggagaaggcggccagggaa
atggacatgctgatcgatgatgatgatgttccggtgaaacaagtagacgcatctatagag
aaagcattgaaggctaagaggcgtcaactggagggcttgctttcccggcctatataccct
cgaggcttctccttcaagtaccccacgttgaatactgcgaccgccttcactggcagcgag
gataatgctttggaggttatgaagaaagcattggcgtcaggacaactgaaaaaagaaaag
aggaaaactaaaaatgcgccacttctacaattacaaaagaagaaatttaaaaaagctaaa
aagtga
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