Trichoplusia ni (cabbage looper): 113494520
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Entry
113494520 CDS
T05757
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113494520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113494520
Spliceosome [BR:
tnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
113494520
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
DUF6382
Motif
Other DBs
NCBI-GeneID:
113494520
NCBI-ProteinID:
XP_026728700
UniProt:
A0A7E5VK76
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Position
5:complement(12053056..12056527)
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AA seq
485 aa
AA seq
DB search
MSEDRSKVKKRKSSGENGTDSAEPVSKTMHIQCPYLDTINRHVLDFDFEKLCSVSLTRIN
VYACLVCGKYFQGRGTNTHAYTHSVADGHHVFLNLHTLKFYCLPDNYEVIDSSLNDIKYV
LNPIFTPEQIKQLDYNTKMSRAIDSTMYMPGIVGLNNIKANDYCNVILQCLSQVRPLRNY
FLREENYANVKRPPGDSSFLLVQRFGELLRKLWNPRAFKAHVSPHEMLQAVVLWSKKRFQ
FIKPSDPIDFMSWFLNSLHMALNGTKKPNSSIIYKSFLGHMRIYTRKLPPTDADDAAKVD
LSTEEYSEMITESPFLYLTCDLPPTPLFTDEFRENIIPQVNLYQLLSKFNGQTSKEYKTY
KENFLKRFEITQLPPYLILYIKRFTKNTFFVEKNPTVVNFPVKNVDFGDILTPEVKAKHN
GKTIYELVGNIVHDGTPEKGTYRAHVLHKPTQQWYEMQDLHVTSILPQMITLTEAYIQIY
ELKQD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaccgatctaaagtgaaaaagcgaaagagctctggagaaaatggcactgat
tccgccgaacctgtatctaagactatgcacattcagtgcccctatttagatacgataaat
agacatgtcctggattttgattttgaaaaattgtgttcggtttcattgacaaggatcaat
gtttacgcttgtctcgtttgcggcaaatatttccagggtagaggcaccaacacccatgcc
tacactcactcagttgctgatggtcatcatgtgttcttaaacctgcatactctcaagttc
tactgtttgcctgataattatgaagtcattgactcatcattaaatgacatcaagtatgtg
ctgaacccaatcttcactccagagcagatcaagcagttggattacaacactaagatgtct
cgtgctatagacagcaccatgtacatgccggggattgtgggacttaataatattaaggcc
aatgattactgcaatgttattctgcaatgtctttctcaagtacgtccactccgcaactat
ttcttgcgcgaggaaaactacgcgaacgtgaagcgtcctcccggcgactcgtccttcctc
ctagtgcaaagattcggggagttgctccgcaagttatggaacccgcgcgcttttaaagca
cacgtatcgccccatgagatgctgcaagctgttgtcttgtggtccaagaagagattccaa
tttattaaaccaagtgacccaatagacttcatgtcatggtttctaaattccctacatatg
gcgctaaatggaactaagaaaccaaacagttctattatttataaatcttttcttggccac
atgaggatatataccaggaagctgccaccaactgatgcagacgacgcggctaaggtggat
ctgagcaccgaggagtacagcgagatgatcacagagtcaccattcttgtaccttacatgt
gatctaccgcccacgccgctgttcactgacgagtttagagaaaatattataccacaggtt
aacttataccaactactttctaaattcaacgggcaaacatcgaaagaatacaaaacctac
aaagagaatttcttaaaaagatttgagataacgcagctgccaccatatttgatattatac
ataaagagatttacgaaaaacactttctttgttgagaagaatccgactgttgtaaacttt
cccgtcaaaaacgttgatttcggtgacatattaacgcccgaagtgaaggcgaaacataac
ggcaagactatttatgagttggtcggtaatatagtgcacgacggtactccagagaagggc
acgtatagagcacacgtccttcataaacctacacagcaatggtacgaaatgcaggatctt
cacgtaaccagtattttacctcaaatgataaccctcactgaagcatacattcaaatttat
gaactgaaacaggattag
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