Trichoplusia ni (cabbage looper): 113494529
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Entry
113494529 CDS
T05757
Name
(RefSeq) rab GTPase-activating protein 1-like isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113494529
Membrane trafficking [BR:
tnl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113494529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PID_2
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
113494529
NCBI-ProteinID:
XP_026728713
UniProt:
A0A7E5VK58
LinkDB
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Position
5:12240630..12271731
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AA seq
1142 aa
AA seq
DB search
MEFNEYQTKEVLDPVDIDFYCDRSRTPSPTPVFNTNVCCDLEDILSDAISETLQGSLRVS
RSQLINQELTIRPEANIESNVPEGLDLYKVIFEVESDTEVKMSEVDGAAVQNNTLPEPES
CRLVGGSKFYEMMDSATSAAASTPSPTEKHDHMKPIESDDEVSDVDQECTVFSGVSYLGA
QNISDPKSENDIQRIMKELSSMPESRDGIAVSISIPVCSQGLVVLYQADSNSVMTRYAVN
RISFYARGAAGSPVASCFAFTWSHGETKESAVYRCHVFRCHIAEAVNQVSSCFAKAFERI
PRSMASSLVGDLSAAPSMTGSLTEGTGGPAVPPMQLMHVLECTVDIKETDAKGTFSHVPK
ERLGFKLRGGIDKQVTINVKQVTSNIQPESDDPQATYTGGLYIERCFGILLAPGRSVKHS
DMRLLEMVSGSSGGSGCSVCALWNAGESALAAFNVASGDGAPAYMSLALDLVIRGIPDPL
RLVIETPVKIFPPTERFWYYSKRPLVQQFYINLKESVDALGQLQYEVGSIETSAELDRSR
LNLPLSLSSLLPSPLSSAPAPPSPSEPDSDGDEPLLSGTGEVSKDCGEDVLVNWAQVLRS
WTGPRPRALGQLVRVGVPEALRGEVWLRLAGVDQNDKLMETYRTLISKECPFEAVIQRDI
ARTFPAHDFFREAGGLGQDSLLRMARAYAVYDHEVGYCQGLSFLAATLLLHMPEEQAFCL
LVRLMYGYGLRELYKDGFEALYMRLHQLDRLMEEQLTDLRAHFQELGVEPHMFASQWFLT
VFTARFPLPLVYHILDVFLLQGIDTLFQVAVALLSRSRKDLLQHDFEGVLKYFRVTLPKK
CRAEESSRQIVKLACSIKVKRLTKYQQEYEKFIKESAEKEKINVEMERLKGINTQLQQDK
ELLEAQLNAARASAEETQKEATHYAAVARDYREICARLDKQLHNLQDYVKACVNCSAKLA
QKDNKEETEQKGEEKEGSSDTEARLRQRVRDLELELAQVKLAHVQVQCSNQELSHQLTVA
LNEVQSAVNQKQTVTPWLVRTLGSIMEAAQNRPSFQTYLPNMTQEQGSTPLHRAGSFTGG
QSHSHVERRGSEPYSPDVVRRKKDINANKRHSMLVESNLTKEAKEINRRSHDVTIVKNLS
MG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaatgaatatcagacaaaagaggtattggacccggtagatatagatttttac
tgtgatcgatcacgtacgccgagcccgacgcccgtattcaacacaaatgtatgttgcgat
ttggaagacattttgagcgacgccatctccgagacgctgcagggttctctacgagtgagt
cgcagtcagctgattaaccaggaactgaccatacgtccggaggcaaacattgaatcaaac
gtgccagagggtttggacctttacaaggttatcttcgaagtagagagtgacactgaggtt
aaaatgagtgaagtggatggtgccgcagtacagaataacacattacctgaaccggagtcg
tgccgtctcgtcggcgggtcgaagttctacgagatgatggacagcgccacgtcagctgcg
gcatccactccgtcgcccacggagaagcacgatcacatgaagcccattgagagcgatgat
gaagtttcagacgtagaccaagaatgcactgtgttcagtggtgtgagctacctcggcgcg
cagaatatatcggaccccaagtccgagaatgatatacagaggatcatgaaggagctcagt
tcgatgcccgagagcagggatgggatcgcagtctcaatatcgataccggtctgctcacaa
ggacttgtcgtcctataccaagcggattcgaacagcgtgatgacccgctacgccgtcaac
cgcatatcgttctacgctcgcggcgcggccggctcccccgtggcctcgtgcttcgccttc
acctggtcccacggcgagaccaaggagtccgccgtgtataggtgccatgtcttcaggtgt
catatcgccgaggccgtcaatcaagtgtccagctgcttcgccaaagcatttgagcgcatt
ccccgctcgatggcttcctctctggtgggcgacctgagcgcagcgccctccatgacgggc
tcgctcaccgagggcaccggcgggcccgccgtgccgcccatgcagctcatgcatgtgctc
gagtgtaccgtcgatatcaaggagactgatgctaagggtacattcagtcatgtcccgaaa
gagcggctcggcttcaagctgcgcggtggcatcgacaaacaagtgacgatcaacgtcaaa
caagtcaccagcaacatacagccagagtcggatgatccacaggccacatacaccggcgga
ctttacattgaacgctgcttcggtatcttgctcgcccccggcaggagcgtaaagcactca
gatatgagattgctagaaatggtgagcggttcgtcgggcgggtccggctgctcggtgtgc
gcgctgtggaacgcgggcgagtccgcgctggccgccttcaacgtggccagcggcgacggc
gcgcccgcatacatgtcgctagcactcgacctggttatcagggggatacctgatccgctc
aggttggtcatcgaaactccagtgaaaatattccccccaacggagagattctggtactac
tcgaagaggccgcttgtacagcagttctatatcaatcttaaagagtcagtcgacgccctg
gggcagctgcagtacgaggtgggcagtatcgagacgtccgcggagctggaccgctcccgc
ctgaacctgccgctgtcgctgtcgagcctgctgccctcgccgctgtccagcgcgcccgcg
ccgccatcaccctccgagcccgactctgatggcgatgagcctctacttagcggcactggg
gaagtgtccaaggattgtggtgaagatgtcctcgttaactgggctcaagtactcagaagc
tggacaggtccccggccgcgcgcgctgggccagctggtgcgcgtgggcgtgcccgaggcc
ctgcgcggggaggtgtggctgcgcctggccggcgtcgaccagaacgacaagctcatggag
acatacaggacgctcatcagcaaggagtgtccgttcgaggcggtgatccagcgcgacatc
gcgcgcacgttcccggcgcacgacttcttccgcgaggcgggcgggctcggccaggacagc
ctgctgcgcatggcgcgcgcctacgccgtgtacgaccacgaggtcggctactgccaggga
ctcagcttcctggccgccacgctgctgctgcatatgcctgaagagcaagcgttctgtctg
ctcgtcagacttatgtacggctatgggctgcgtgagctctacaaggatggcttcgaagct
ctctacatgaggctgcatcagctggacaggcttatggaggagcagttaacggacctgcgc
gctcacttccaagagctaggcgttgaaccgcacatgttcgcctcgcagtggttcctcacc
gtgttcaccgccaggttcccgttgccgctggtataccacatcctagacgtgttcctgctg
caaggcatagacacgttgttccaagtggcggtggcgctgctgtcgcgctcgcgcaaggat
ctgctgcaacacgacttcgagggtgtactcaagtattttagagtaacgttgccaaagaaa
tgtcgcgcagaagagtcgtcccgacaaatcgtgaagttggcgtgcagcatcaaagtcaag
cggctgactaagtaccagcaggaatacgagaagtttatcaaagaatctgctgaaaaagag
aaaattaacgtggaaatggaaaggctgaagggtatcaatacacagttacaacaagataaa
gagttgctcgaagcacagctgaacgcggctcgcgcatctgcggaagagacccagaaggaa
gccacgcactacgcggccgtcgcgcgggactaccgcgagatatgcgcgcgactcgacaaa
caactacataacttacaggactacgtgaaagcctgcgttaattgcagcgcgaaacttgcg
caaaaggataataaagaagaaacagaacaaaaaggcgaggagaaggaaggctcgagcgac
acagaggcgcgcctgcggcagcgcgtgcgcgacctggagctggagctggcgcaggtcaag
ctggcgcatgtgcaggtgcagtgcagcaaccaggaactaagccaccagctgacagtcgcc
ctcaacgaggtccaatcggccgtcaaccagaagcaaacagtcacgccctggttggtgcgc
actctcggttccatcatggaagcagcacagaacagaccatcattccagacatacctcccc
aacatgacacaggagcagggctcgacgcccctccaccgcgcgggctcgttcacgggcggc
cagagccacagccacgtcgaacgccgcggctccgagccctacagccccgacgtcgtccgc
cggaagaaagacatcaacgccaacaaacgacattccatgctcgtcgagtccaacctcacg
aaagaggccaaagaaatcaaccgacggagtcatgacgtcaccatcgtcaaaaacctctcg
atgggttga
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