Trichoplusia ni (cabbage looper): 113494601
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Entry
113494601 CDS
T05757
Name
(RefSeq) uncharacterized protein LOC113494601 isoform X1
KO
K14409
protein SMG7
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113494601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113494601
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113494601
mRNA cycle factors
Common to processing body (P body) and stress granule
113494601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
113494601
NCBI-ProteinID:
XP_026728819
UniProt:
A0A7E5VKL8
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Position
5:13990709..14000924
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AA seq
1153 aa
AA seq
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MVLNAAVQMLREADELKQKISKFKSGTSMLQERGLWATQQQLQKVYQKVLILDLDYALDK
KVEQDLWNVGFKQQIEALQAISKDRKNPLRSEGQAMLSWVLQAAAGFYLCLLHQICTTFK
LDLPFRRRASLLGLVEGWGAGESAVGARLPPPASARYICQHCLVHLGDLARYRQQLRVAH
TFYRHALVVSAHSGQPYNQLALVAWRRGRRLGALYWHVRSLLVRAPFPPAPANLARTLRA
AAAASNSGDAKELPVIPGVTDGLALAPAPAPARLDAHSYVTELIRAMHYIHTVEELDTAA
ALVNSLNSSLTALIATDSFESMTLIKMACVMIWLVHSTTEELTVESGNVTEGEARAAQLS
CSLATGTLLALLLPQYTADQPVQRALPALKVWMQWSAWHPRVLSSGAWLSLAALWPAFAH
TLNLLAPSAATLTDTYDSVPLPEDEELAGFLPLEEALKGLRFPNHAAWDTYGGRVPDLDE
DADDNDADPPAEVSVTCLSGEPELEQRVRALRLLLLGKKLAQLKPEHLSYVEEDGTVRFS
ASSVGGEQLSAALLQLAAARSGGAAGGAGGAPEPEDDSDDEPARPPPPIVISEADFREKV
REKRVGILKPQGSLERAREERALATQDDQEVDVAEDSKSEDKKEVRKPRVNIAMAAIMRK
QEETNKQVKFVTPPPTPDSTVDSSESKEDKPKVIQPKAIKSLANLPLGRKTGGILSLKDK
SAGYPHLVLNTEPEPPKKVEKDEKKEAKPSQSSQSSQNYPQKRQEHPPSPNWTPLQNTYP
DAPRMNFQKNYGIQNAGLSYNPSYPAPNINNQGIRLPVVNPKEIDVRTAALQKQNSRQEL
FQDGQKFNHNYQMSGDKKNFLNDLPPRFANQYRYWQNAQESQFNDNKFRDDSFKQSAMFP
GQQPRSWSAQPQPDTYQQQPVWWKPDQQNNFNANFTQQLQPNFYSQHLNSNISNPYQNLS
FNQLQNNIPQNKQESFSQPAYLQTAIGQPQLQTLQNLVTSPNFNSSLNSFSYAPPVTYDS
SMYPQFSNKLGYQPLQMKMVDKPLAYPPGKDVMDMNNLSYAPAALDMQQRNLNMNFNEPL
NNDVGSAKNMDQVGQSSGLSAGSTYSLFSGAPDTSAWASGAQRQPPSLWSGPGPSPLERL
LEQQKQMKPPTPQ
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggttttaaacgccgccgtgcagatgttgagggaggcggatgagctgaaacagaaaata
tcaaaattcaagagtggaacatctatgttacaagaaaggggtctttgggccacacaacaa
cagttacaaaaggtgtatcaaaaagtactaattttggatcttgactatgcattggacaaa
aaagtggaacaggacttgtggaatgttggctttaaacagcagattgaggctcttcaagcc
atctctaaggacaggaagaatccccttcgtagtgaaggacaggctatgctatcatgggtg
ctacaggctgctgcagggttctacctctgcttactgcatcagatctgcaccacattcaaa
ttagatttaccttttagacgtcgcgcgtcgttgctgggtctggtggaggggtggggcgcg
ggcgagtcggcggtgggcgcgcgcctgccgccgcccgcctccgcgcggtacatctgccag
cactgcctcgtgcacctcggggacctggccaggtaccgccagcagctgcgggtcgcgcac
accttctacagacacgcgctggtggtgtccgcgcactcggggcagccctacaaccagctg
gcgctggtggcgtggcggcgcgggcggcggctgggcgcgctgtactggcacgtgcgctcg
ctgctggtgcgcgcgcccttcccgcccgcgcccgccaacctggcgcgcacgctgcgggcc
gccgccgccgcctccaacagtggtgacgctaaggagttgccggtgatcccgggcgtgacg
gacggcctcgccctcgcgcccgcgcccgcacccgcgcgactcgacgcgcactcctacgtg
accgagctcatccgggccatgcactacatacacaccgtggaagagctggacacggcagcg
gcgctggtcaactccctcaactcctcgctcacggcgctcatcgcgactgatagcttcgag
tctatgacactcattaagatggcgtgtgtgatgatatggctggtccattccacgacagag
gagttgacagtggagagtggtaacgtgacggagggcgaggctcgcgcggctcagctcagc
tgttccctggccacggggactctgctggcgctgctgctgccgcagtacactgcggaccag
cccgtacaaagggcgctgcctgccttgaaggtgtggatgcaatggtctgcgtggcacccg
cgggtgctgagctcgggcgcgtggctgtcgctggccgcgctgtggcccgccttcgcgcac
acgctcaacctgctcgcgcccagcgccgccacgctcaccgacacctacgacagcgtgccc
ttgcctgaagatgaggagctagccgggttcttgccgctagaggaggcgctgaagggactg
cggttcccgaaccacgccgcctgggacacgtacgggggccgcgtgccagacctggacgag
gacgctgatgataatgatgccgaccccccggcggaggtgtcggtgacgtgcctgagcggc
gagcccgagctggagcagcgcgtgcgggcgctgcgtctgctgctgctcgggaagaagctg
gcgcagctcaagccggaacatctgtcctacgtggaggaggacggcacagtccggttctcg
gcgtcgtcagtaggcggcgagcagctgtcggccgcgctgctgcagctggcggcggcgcgc
tcggggggcgcggccgggggcgcggggggcgcgcccgagccagaggacgactccgacgac
gagcccgccaggccgccgccgcccatcgtcatctccgaggctgacttccgggaaaaagta
cgcgagaaacgtgtgggcatcctcaagccacagggctcgctggagcgcgcgcgggaggaa
cgcgcgctcgccacacaggatgaccaggaagtggacgttgctgaagacagtaagagtgaa
gacaagaaggaggtccgcaagccgcgcgtcaacatcgccatggcggccatcatgcggaaa
caggaggagaccaacaaacaggtcaagttcgtgacgccgccgccgacgccggactcgacg
gtggacagcagcgagtccaaggaggacaaacctaaagtgatacagcccaaagctatcaag
tctctggcgaacctcccgctcggcaggaagacgggagggatcctgtccctcaaggacaag
tccgcgggttaccctcatttggtcctcaataccgaaccagaaccacccaagaaggtcgaa
aaggacgaaaagaaggaagccaagccgagccagtccagtcagagctcgcagaactacccg
cagaagaggcaggagcaccccccttcgccaaactggacgccgctgcagaacacgtacccc
gacgcgccgcggatgaacttccagaagaattacggcatacagaatgcagggctcagctac
aaccccagctaccccgcgcctaacatcaacaaccaaggcatcaggctgcctgttgtcaat
cccaaagagatcgacgtcagaaccgccgcccttcagaaacagaactcgcgccaagagctg
ttccaagacggacagaagttcaaccacaactaccagatgtctggcgataagaagaacttc
ctgaacgacctaccgccgcgcttcgccaaccagtaccggtactggcagaacgcgcaggag
agccagttcaacgacaacaagttccgcgacgacagcttcaagcagagcgccatgttcccc
ggccagcagccgcgcagctggagtgcgcagccgcagcccgacacctaccagcagcagccc
gtctggtggaagcccgaccagcagaacaacttcaacgccaacttcacgcaacaactgcaa
cccaacttctactcgcagcatttgaactctaacatcagcaatccctatcagaacttgtcg
ttcaaccagctgcagaacaatattccgcagaacaagcaggagagcttcagtcagccggcg
tacctgcagaccgccatcggtcagccgcagctgcagacgctgcagaacctggtgacgtcg
cccaatttcaactcatccctgaacagcttctcttacgcgccgcccgtcacctacgactcg
tccatgtacccgcagttcagcaacaagctcggctaccagccgttgcagatgaagatggtg
gacaagccgctggcctacccccccggcaaggacgtcatggacatgaacaacctgagctac
gcgcccgccgcgctcgacatgcagcagagaaacctcaacatgaacttcaatgaaccactc
aacaatgatgtaggaagcgccaagaatatggaccaggttgggcagtcgagcggcctgtcg
gcgggcagcacgtactcgctgttcagcggcgcgcccgacaccagcgcctgggccagcggc
gcgcagcggcagccgccgtcgctgtggtcggggccgggcccctccccgctggagcgcctg
ctggagcagcagaagcagatgaagccgccgacgccgcagtga
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