Trichoplusia ni (cabbage looper): 113494622
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Entry
113494622 CDS
T05757
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tnl01009
]
113494622
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113494622
Enzymes [BR:
tnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113494622
Protein phosphatases and associated proteins [BR:
tnl01009
]
HAD phosphatases
Fcp/Scp phosphatases
113494622
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113494622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
113494622
NCBI-ProteinID:
XP_026728854
UniProt:
A0A7E5VKQ3
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All DBs
Position
5:complement(14144533..14146483)
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AA seq
597 aa
AA seq
DB search
MEVLNQKPRKRPTKIEEMTKEQVRQAILKKRECNSKAQKIVESLIEKGVTESYLVHCLPD
INQTHFDDIIEERSIIQLCGYPICLKSLSVKDIPKQKYRISLKTNKVYDITARKNFCSNS
CYNAAMYVKKQMLTSPLWFREYEIIPQFHLMKLGEVGGMGEEVDLTMINRVKIKVSENKS
FTSINDFAEASLNEMSHNEDVERHTETNKMKELENISNTDNIIKPYSELKINTNITNSAV
SDVPKIIEKENSNTKSVEKSISVPDAGATKKNIKPVPNPLNIVGDIIEKPEKKIDPILTA
AISNTEEKENEKKTSKKVSQKKQPLLTALTIEVEKCLAEWFTLDTILLLFGEEKVREMVA
DKGECIKEYLNNYAKGIFYSSNVYDQYQALCKKLNMLELEDRKFDNQALKRETKPLPDYT
MLQEESKKMQLKVKAFFSGETDVEETVIEEPIKTDDIEEENLTNLPLVDKNSQNALRRRI
VCQHLNKVLPDILRSLGLLSFSISSDIRLLVNTFKLKANNIMFKPIQWTLIAIIFIKLLS
LRDKRLEYLLEQPTGYQHMQLLLLSYKQDGGYLDRLISWLTDIDRLLDTNDTQLTLE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctcaaccaaaagcctagaaaaaggcctacaaaaatagaagaaatgactaag
gaacaagttcgtcaagctatcttaaagaagcgagagtgtaactcaaaggcacaaaagatt
gtcgagagccttatagagaaaggcgtgaccgaatcttacttagttcattgcctaccagac
ataaatcaaactcactttgacgatattattgaagagcgatcaatcattcaactttgtgga
taccctatttgtttaaaaagcttgtcagtgaaagatatacccaaacagaagtacaggata
tctttgaagactaacaaagtgtatgatattactgctagaaaaaacttctgcagtaattcc
tgttataatgctgctatgtatgttaagaagcagatgctgaccagccccttgtggttcaga
gagtatgagatcatcccacagttccacctgatgaagctgggcgaagtaggaggtatgggt
gaggaggtggatttgactatgataaacagggtgaaaattaaagtatctgaaaacaaatca
ttcacatctatcaatgattttgctgaagccagccttaacgaaatgtcacacaatgaagat
gttgaacgccatacagaaacaaataaaatgaaggaattggaaaacatttcaaacacagat
aatataataaaaccttactcagaattgaaaattaatactaatattacaaacagtgctgta
tctgatgttcctaaaatcattgaaaaagagaacagtaataccaagtctgttgaaaaatca
atatctgtgccagatgcaggggctacaaagaaaaatataaagcctgtacccaatccactg
aacatagttggtgatattatagaaaaaccagaaaagaaaatagaccccatactaactgct
gccatatctaatacagaagagaaagagaatgagaagaaaactagtaaaaaggtttcacag
aaaaaacaacccctattaactgctttaacaattgaagttgaaaaatgtctggctgaatgg
tttacactagacacaattctcctgctctttggtgaagaaaaagttagagaaatggttgca
gacaaaggagaatgcatcaaagagtacctaaataactatgcaaaaggaatattctatagt
tctaatgtgtatgaccagtaccaagctttatgtaaaaaacttaacatgttagagttggag
gacaggaagtttgataaccaggcattgaagagagaaactaaacctttgccagactacacc
atgctgcaggaggaaagtaagaagatgcagctgaaagtgaaagctttcttctctggagaa
acagatgtagaggaaacagttatagaagagcctatcaaaacagatgatattgaagaagaa
aacctaacaaacttaccactagtagacaagaattcacagaatgcattacgtaggagaata
gtctgccaacatttgaacaaggttctgccagacatactccgttcgttaggcctccttagt
ttctcaattagctctgatatcagattactagtgaatacttttaagttaaaagcaaataat
ataatgtttaagcctatacaatggaccttgatagctataatattcatcaaactgttgtca
ctgcgagataaaaggcttgagtatttacttgagcagcccactgggtaccagcacatgcag
ctgttgctgttgagttataagcaagatggcggctacctggatagattgatcagttggctt
acagatattgacagactattagatactaatgacacgcagctaactttagaataa
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