Trichoplusia ni (cabbage looper): 113494716
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Entry
113494716 CDS
T05757
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113494716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113494716
03036 Chromosome and associated proteins [BR:
tnl03036
]
113494716
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113494716
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
113494716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_WDHD1
HMG_box_2
Zw10_N
GTP_EFTU_D2
New_glue
Motif
Other DBs
NCBI-GeneID:
113494716
NCBI-ProteinID:
XP_026728948
UniProt:
A0A7E5VKU4
LinkDB
All DBs
Position
6:complement(1535718..1569040)
Genome browser
AA seq
1733 aa
AA seq
DB search
MSKRRRASSVASRGADGDDSDDGIELSNPGPPPSTRKRKKLDPGEICQQLYDTIRSYKKE
DGTLLCDSFIRAPKRRQEPQYYEVVSQPIDLLRVQQKLKTDTYEDIEELSADIELLVNNA
KAFYKPDTVEYKDAIELWKLFAQTKNALENGEDIKVPKLSRTGSSSRRSDVAEDLSETST
NNEEDNVFEELFSAVMSANSDGRPLYPAFQFLPSKRRYPEYFNVIESPIDLKTIAQKIQG
GEYTNLIDLEKDLLLMVRNACHFNEPGSQIYKDAKTLKKLIKQVIQMRKQEIDQHGRSGP
AKTSERIRSKRTSRVGPVPNSKALAIMDPPGSDNEPDVKHSDDSAGDSDEEKNENEDSPQ
WKLLETIKNHLGPNGAPMSESFWKLPSRREYPDYYKEIKNPVSLNQIKNKIRRGSYGTLS
EVAGDMNIMFENAKQYNVPSSRLYKDAVKLQRIMQQRVQELLDIVQSSSSDDESLSSVKN
QAQVQTPRPRDVRKGRPRINPVQAAPSPISTPIKSNLPLKKKLHYVSKQLVEFTCSDGRQ
PMLLFMEKPSKKLYPEYYNVIEKPIDMITIETNIKNDRYNSIDEMVSDFRLMFSNCRQFN
EEGSMIYEDANLLERVMNEKLKEVNSSFERKTPLKTFKAAKSRQLSPFEQKLRTLYDAIR
DYRDPKANRQLALIFMKLPSKTEYPDYYELIKNPIDMEKIAHKLKNNVYNSVNELASDFI
LMFDNACKYNEPDSQIYKDALILHRVCLQTKQMLREDDDAVPDVPAAVQELLLNLFTSVY
NHQDEEGRCYSDSMAELPEHDETGNGEKVRAISLDLVKRRLDKGLYKRLDHFQQDMFAVF
ERARRLSRTDSQIFEDSVELQSYYIAQRDALCRSTLASPALAFTRDTMATSVELVKQCKL
LQENEDEDETRSSTDDSIPPGGAPLQQTAYTKGDFIYIQPDKGNKEPGIAQVERVWTNND
GVPCVYVNVYFRPQETFHVRTRKFLQQEVFKTEAHRVLPLDHVAGHCYVMNVKEYFKFKP
EGFADKDVYVCESRYNTKLRWFKKIKVWEGAEKEATLIPREVPLEPSRTVSVFRERVEKH
KDELAELEVLENVHEKERPDVVMYNPLGTDDENTYYEQYNTVCSGVIKTGDYVYVVTDGG
KQMIAQVDTIWETGDNKCYFRGPFLIFPSEVANIINKSMFDFQPFYKQEVLLTTIHDTSP
LVGIVGKCSVLDYDDYLKCRPTEIAENDIFVCESVYDESNRVARKLKAGLRKFEHTKDVT
VDEIYYFPKPLGPPPLATAQEVQSTSSAFTQKQFNQNVNSMDSMDSKPQFTNLINTTIGS
QDVEMILENSLDDSSLASPATPLSIGGNSNPYNPSMTATPTQERSSTTTAPASSKKKKDN
KQKIVTGYILYSSEVRRAIVANNPESTFGEISRIVGNEWRSLPASTKQSWEERATRCNEE
TSARLAEEMRELAQHTPMEMTYECAWDTCDYQFEDLSDCMEHCIGDGGNSVSAAGHVQQH
YRGSLSEYPCVWRNCARVRKGQAPFPNLPRLLRHVRDLHVNKGNGRLMAVHERSRNFVPS
SKKPPKQFSTNVRSGVMSPGASLSGMSPLARNTPSPGAGEASLCAAPAAPRPHLDPLFVA
APPRAQRLTHSEAYIRYIEGLHSEQKYITPWEKSLTPMPMNPDPAQFNMHKVPAHWMTEE
AITGYLAQDKSLSETDIQKMDQNSKILKGLCALRDFMMKDALYISKCVYSNNI
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagacgccgtgcatcttcggtggcctcccgaggagctgatggggatgacagt
gatgacggcatcgagctgagcaatcccggtcctccgccatctactcgcaaacgcaagaag
ttagatccaggtgaaatttgccagcaattgtatgacaccatacgatcatacaaaaaggaa
gacgggactttactttgtgactctttcataagagctcctaagagaagacaggagcctcag
tactacgaggttgtctcacaaccaattgatttattaagagtacagcaaaagttaaaaaca
gatacatatgaagacattgaagagttgtctgctgatatagagcttcttgtcaacaatgct
aaagccttctacaagcccgacacagttgagtacaaggatgcgatagaactttggaaactg
tttgcccaaactaaaaatgctctggaaaatggtgaagacattaaagtacccaagttgtct
cgcaccggttcgtccagccgacgatcagatgtggccgaggatttgtccgagacctccacc
aataatgaggaggataatgtgtttgaagaattgtttagcgctgtaatgtcagcaaacagt
gatgggagacctctatatccagcattccagtttctcccatcaaaacgccgctacccagaa
tacttcaacgtaatcgaatctcctatagacttgaagaccatcgcacagaagatacaaggt
ggagagtacactaatctgattgatttggagaaggatttactgctcatggttagaaatgct
tgtcatttcaacgaaccaggcagtcagatctataaggatgctaagactttgaagaagtta
attaaacaggtcatacaaatgcgtaagcaagagatagatcagcacggccgcagtggtccg
gcgaagacttcggaacgcattcgcagtaagcggacctctcgcgtagggccggtgcccaac
agcaaggctctggctatcatggacccaccgggctctgacaacgagcctgatgtgaagcat
tcagacgacagtgctggcgacagtgatgaagagaaaaacgaaaatgaagattcaccgcag
tggaaactgttggagacaattaaaaaccacttaggacccaacggtgcgcctatgtcagaa
tcgttctggaagcttccgtcacggcgtgaatatcctgactattataaggagatcaagaat
ccggtatctttaaatcaaatcaagaataaaataagacgtggcagttacggtaccctgtcg
gaggtagctggcgatatgaacatcatgtttgaaaacgctaagcagtacaacgtgccctcc
tccagattgtacaaggacgccgttaaattacaaaggatcatgcaacagcgagtacaagag
ctgttggacatcgtgcagagctcgtcaagtgatgacgaaagcctgtcgtctgtcaagaac
caggcacaagtacaaacaccgaggcctagagatgtccgtaaaggtcgtccccgtatcaat
ccggttcaggcagcgccctcccctatcagcaccccgatcaagtccaacctcccgctgaag
aagaagctgcattacgtatcgaaacaactcgttgagttcacctgctcagatggaagacaa
ccaatgttgttgttcatggagaaacccagtaagaaattgtatcctgagtactacaatgtg
attgaaaagcctatagacatgatcacaattgaaactaatattaagaacgaccgctacaat
tccatcgatgaaatggtctccgacttccgcctaatgttttcaaactgccgccaatttaac
gaagaaggttccatgatatacgaagacgcgaaccttctagaacgagtcatgaatgagaag
ttgaaagaggttaatagcagcttcgagaggaagactcctttgaagactttcaaggcggct
aagtcccgccaactgtcaccgtttgagcagaaactgaggactctgtatgatgctatcaga
gattatagggatcctaaggcaaaccgccagctggccctgatcttcatgaagctaccaagc
aaaaccgagtaccctgactactacgagttaatcaaaaaccccatagatatggagaaaata
gcccacaagctcaagaacaacgtttacaactctgttaacgagttggcgtcggatttcatt
ctgatgttcgataacgcctgcaagtataatgagccagattcacagatatacaaggatgct
ttgatcttacatcgcgtgtgtcttcagactaagcagatgttgagggaggatgacgatgct
gtaccagatgtgccggccgctgtccaggagttgttgctgaacctcttcacgagtgtctac
aaccatcaagacgaggagggcagatgttactccgacagtatggctgagttaccggaacac
gacgagaccggcaacggcgagaaagttcgcgccatctccttagacctggtcaagaggagg
ctggacaaaggattgtacaagcgacttgatcacttccagcaagatatgttcgctgttttc
gaaagggcccgccgcctgtcccgcacggacagccagatcttcgaggactcagtagagctg
cagtcgtactacatcgcgcagcgggacgcgctgtgccgctccacgctggcgtcgcccgcg
ctggccttcacgcgcgacaccatggccaccagcgtcgagctcgtcaagcagtgcaagctg
ctgcaggagaacgaggacgaggacgagaccagatctagcacagacgactccataccacca
ggtggcgctcctttacaacaaacagcgtacactaaaggggacttcatatacatacagccg
gacaaagggaacaaggagcccggtatcgcgcaagtcgagcgcgtctggaccaacaacgat
ggcgtgccttgtgtctacgttaatgtgtatttcaggccccaggaaacgttccacgtgcgc
acgcgcaagttcctgcagcaggaggtgttcaagaccgaggcccaccgcgtgttgccgctc
gaccacgtcgccggacactgctacgtcatgaacgtcaaggagtacttcaagtttaaacct
gaaggtttcgccgacaaagacgtgtacgtatgcgaaagtcggtacaacaccaagttgcgc
tggttcaagaagatcaaggtgtgggagggcgccgagaaagaggccacactcattcctaga
gaggtgccactagagccgagtagaacggtatcggtgttccgtgagcgcgtcgagaaacac
aaggatgaactcgctgagctggaagtgctggagaatgttcacgagaaggagaggccggac
gtagtgatgtacaacccgctgggaacagacgatgagaacacgtactacgagcagtacaac
accgtctgttccggcgttatcaagacgggtgactacgtgtacgtggtgaccgacggcggc
aagcagatgatagcccaagtcgacactatatgggagactggagacaacaagtgttacttc
cgcggtccgttcctcatcttcccatcggaagtagcaaacataataaacaagagtatgttt
gattttcagcctttctacaagcaagaggtgctgttgaccacgatccacgatacgagccca
cttgtgggcatcgtgggcaaatgttccgttttggattatgatgattatcttaaatgccga
ccgacggagatagcagagaacgacatattcgtgtgtgagtcggtttacgacgagtccaac
cgcgtcgctcgcaagctaaaggcgggtcttcgcaagtttgaacataccaaagatgtgact
gtcgatgagatctactacttcccgaagccgctgggaccgccgccgctggccaccgcgcaa
gaggtgcagtccacgtccagcgccttcacgcagaagcagttcaaccagaacgtcaactct
atggactccatggacagtaagcctcagttcacgaacctcatcaacacgactataggcagt
caggatgtggagatgattcttgaaaattcgcttgacgactcctctctcgcttcacctgct
acgcccctatccataggtggtaacagcaacccatacaacccttcaatgacagcgacgccc
acccaagaacgctccagcacgacaacagcgccggctagcagcaagaagaagaaagacaac
aaacagaagatagtcaccggctacattctgtactccagcgaagttaggagggccatcgta
gcgaataaccctgagtcgactttcggcgagatatcgaggatagtggggaacgagtggcgc
tcgctgccggcctccaccaagcagagctgggaggagcgcgccacgcgctgcaacgaggag
acctccgccaggctcgccgaggagatgagggaactcgcccagcacacgccgatggaaatg
acatacgaatgcgcttgggacacctgcgactatcagttcgaggatctatctgactgcatg
gaacactgcatcggtgatggcgggaacagcgtgtcggcagcgggtcacgtgcagcagcac
taccgcggctcgctgagcgagtacccctgcgtgtggcggaactgcgcgcgcgtccgcaag
ggacaggcgcccttccccaacctgccgcgcctgctgagacatgtccgcgacctgcatgtc
aacaaggggaatggacggttgatggcggtgcatgagaggtcacgaaacttcgtgccctcc
tcgaagaaaccgcccaaacagttcagcaccaatgtacgtagcggcgtgatgtcacctgga
gcgtccctgtcgggcatgtcccctctagcccgcaacacgccgtccccgggcgcgggcgag
gcctccctgtgcgcggcccccgcggccccgcgcccgcacctcgacccgctgttcgtggcc
gctcccccccgcgcgcagaggctcacgcactcagaggcttacatcaggtacatcgaaggc
ttgcactccgagcagaaatacataacgccgtgggagaagtccctgaccccgatgccgatg
aacccggacccggcacagttcaacatgcataaggtgcctgcccactggatgaccgaggaa
gccattaccggctacctggcccaggacaagtcactctcggaaaccgacatacagaagatg
gatcagaattcaaagatcctcaaaggactttgcgctctaagagatttcatgatgaaagac
gccctgtatatatctaaatgcgtgtatagtaataacatttga
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