Trichoplusia ni (cabbage looper): 113494849
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Entry
113494849 CDS
T05757
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113494849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113494849
03036 Chromosome and associated proteins [BR:
tnl03036
]
113494849
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113494849
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113494849
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
113494849
Noncanonical PRC1 (PRC1.1)
113494849
Noncanonical PRC1 (PRC1.3/1.5)
113494849
Noncanonical PRC1 (PRC1.6)
113494849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
zf-RING_5
RING_XB3-XBAT31
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
Rib_recp_KP_reg
zf-C3HC4_5
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
113494849
NCBI-ProteinID:
XP_026729152
UniProt:
A0A7E5VLG4
LinkDB
All DBs
Position
6:complement(8330566..8333683)
Genome browser
AA seq
376 aa
AA seq
DB search
MSSTEPSQNKTWELSLYELHRTPQEVITDATEIAVSPRSLHSELMCPICLDMLKKTMTTK
ECLHRFCNDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKXYPSRDEYEAHQE
RLLTKLSMSHSQASLVNSITEGIKLQSQNRPQRSRKNHEDNSNTSNSNGNAETTQNGGST
SAPKEGTTTASNPTPSGQSTSNPASVRSTPSPVPSNISSVKKHKHTKRAKSILTSERSEE
SESSDGRTEGENSMDTEGEGEPLNPNEIELVFKPHPTEMTGDNQLMRALRDSSVRYLKTT
ANASVDHLSKYLAMRLTLDLDAELPEAYRLLNFCIYVAPAPGQFVPLAGSQTLRQINDKF
WKVNKPLEMYYSWKKT
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacggagccttcccaaaataaaacatgggagctatccctttacgagcttcac
cgtaccccacaagaggtgataacggacgccactgagatcgcggtgtccccccgcagtttg
cacagtgaattgatgtgccctatatgtttagatatgctcaagaagactatgactactaaa
gaatgccttcacagattctgcaacgactgtattataacagccctccgttctggtaacaag
gaatgtcctacatgtcgaaagaaactagtgtcgaaacgttcgctgcgacctgatcctaac
tttgacttgttgatatcaaagnattatcctagcagagatgagtatgaagctcaccaagag
cgtttactgactaagctgagtatgtcacactctcaagcatctctagtaaattctattact
gaggggattaaattgcagtcacagaacaggccgcagcgatctaggaagaatcacgaggat
aatagtaacacttctaattcgaatgggaatgcggagactactcagaacggtggtagtact
tcagctccgaaggaggggacaacgactgcaagtaaccctacaccgtcggggcagtcgacg
tcaaaccctgcgtcggtgaggagcacgccgtcgccagtgccatcaaacatcagctcggtg
aaaaaacacaagcacactaagcgagccaagtctatactgacatcagagagaagtgaggag
agtgagtctagtgatggcagaactgagggagagaactcaatggacacagagggagaagga
gagccactcaaccctaacgagatagagctggtgttcaagccgcaccccacagagatgact
ggagacaaccagctgatgagggccctccgagacagctccgttaggtacttgaagactact
gccaatgcctcagtggaccacctgagcaaatacctagcaatgcgtcttacactagacttg
gatgccgagttgccagaagcttaccgtttgctgaacttctgtatctacgtcgctccggcg
ccgggtcagtttgttccgctggctggctcgcagactctgagacagatcaatgataaattt
tggaaggtgaacaaacccctagagatgtactactcatggaagaaaacataa
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