Trichoplusia ni (cabbage looper): 113494851
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Entry
113494851 CDS
T05757
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113494851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113494851
Enzymes [BR:
tnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113494851
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113494851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
113494851
NCBI-ProteinID:
XP_026729153
UniProt:
A0A7E5VLE3
LinkDB
All DBs
Position
6:2897427..2910998
Genome browser
AA seq
1130 aa
AA seq
DB search
MNSKKIAKNPSLAYTSHPDYRKPPKIANPYLQCLGAPHIDSFNYMLHDGLNAAIADLVPV
EFELPSGERVKITIDEAGFAKPSVPMEAVGVKNQTVLPTECRQRAATYKGDFKIRLTLTI
DDKAITVDRSLGALPIMIKSKMCHLADLSPEELVENNEHADEWGGYFIVKGHERLARMLL
VTRRNYPVAIKRSGWKMRGNLFSDYGIMVRCVTSDQTSTNNVLHFLTNGTCKLMFSYRKM
MYYAALLLIMKCLVDWPDHYIYRLLLHGKKNDLYYVNCIQNMLRELHEEGLHTSEECRLF
LGRMFRPKLYELPPWASDLDAANFLLDRCILIHLKDHKDKFNALVFMTQKLYDLVQNKCK
VEGADAVMVQELLLGGHLYLQILKERLQQLTSIVRIQLQRKAKTGKKLNIGQHELQQILR
SAGNLEQKMETFLATGNAPSKNVNLAQDKGLTIVAENINRMRYMSHFKSIHRGSFFMEMR
TTEARQLLPDAWGFVCPVHTPDGAPCGLLNHLTMTAQVTQTPEAKQVAALPQVLERCGME
PVSIISQTPISRDVYKYPVFVDGRLVGYFPEDTVDKSAAYLRTLKIKGEEVPITTEIVVV
PKKEICAQYAGVFLMTSEARMMRPVINLATGQLELIGTMEQLYLDIAVTHHEIHKGKTTH
VELSQTAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWRTNAETKLYRLQNPA
TPLFRPTHYDNIGLDDYPCGTNAIVAVISYTGYDMEDAMIINKSAYERGFGAGSVYKSEF
VELAHPASYFCRDQARQDLAQYIDDDGLPAVGARLQPDAPFYSFYDAEKNIFVVSKYHGK
EEVFVDSVRLCGDFSSRPLKKACIMLRLQRNPTVGDKFASRAGQKGICSQKWAAEDLPFT
ESGLVPDILFNPHGFPSRMTIAMMIECMAGKAASIHGHVHDATPFRFNEKDTAINYFGRL
LEASGYNYYGTERMYSGVDGREMDADIFFGVIHYQRLRHMVSDKWQVRTTGAVDALTRQP
VKGRRRGGGVRLGEMERDALASHGAAFLLHDRLFHCSDKTQAVLCSKCGTLLGPMVGKSD
STKDTCRLCGEGHLVSVAIPYIFKFFVTQLACVNINVKINCSEHLSITGC
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagaagatagccaagaacccttctttggcgtacacaagccacccagactac
agaaaaccgcctaaaatcgctaatccgtatcttcaatgtctcggcgcgcctcacatagac
tcttttaactacatgttacacgatggtctgaatgcagcgatagcggatttagtccccgtt
gaatttgagttgccgagcggggaacgtgtgaagataactatcgatgaggcaggattcgcg
aagcccagtgtacccatggaggctgtaggtgttaagaatcagacagtactgccaacggag
tgcaggcagagagcagctacttataaaggggactttaaaatccgactaacgctcactata
gacgataaagctattacggttgataggtctctgggagctctacctattatgataaagtca
aaaatgtgccatttagcggacctatctccagaggagttggtggagaacaatgaacatgca
gacgagtggggaggatacttcattgtgaagggtcatgagcgtcttgcccgtatgctcttg
gtgacgagacgcaactacccagtggccatcaagcgatcaggatggaagatgcgagggaac
ctcttctcagattacggcatcatggtccggtgtgtcacttcagaccagaccagcactaac
aacgtactgcacttcctaacgaacggcacatgcaagctgatgttctcgtatcgtaagatg
atgtactacgctgctctactgctcatcatgaagtgcctggtggactggcccgaccactac
atatacaggctgttgttacacggaaagaaaaacgatctctactatgttaactgcatccag
aacatgttacgagagctccacgaggaaggtctccacacgtctgaggagtgccgcctcttc
ctaggccggatgttcaggccgaagctgtacgagctgccgccctgggccagcgacctggac
gccgccaacttcctgctcgaccgctgcatactgatacatctgaaggaccacaaggataag
ttcaatgccctggtgttcatgacgcagaagctgtatgaccttgtacagaataagtgtaag
gtggaaggcgccgacgccgtcatggtccaagagctgctgttgggcgggcacctgtacctg
cagatcttgaaggagaggcttcagcagctgaccagcatcgttaggatacagctgcagagg
aaggccaagaccggcaagaaactgaatataggacagcacgaactacaacaaatcctccgc
agcgctggcaaccttgaacaaaagatggagacattcctggcgacgggcaacgccccgtcc
aagaacgtgaacctggcgcaagacaaaggtctcactatagtagcggagaatatcaacagg
atgcgatacatgtcgcacttcaaatcgatccaccgcggctcgttcttcatggagatgcgc
acgacggaggcgcggcagctgctgccggacgcgtggggcttcgtgtgtcccgtacacacg
cccgacggcgcgccctgcggactgctcaaccatctcaccatgaccgcgcaggtaacacaa
acccctgaggcgaagcaagtagcggcgttaccacaagtgttggagagatgtggcatggag
ccggtgtccataatatcccagacgccgatatctcgcgacgtgtacaagtacccggtgttc
gtggacggccgcctggtgggatacttccccgaggacactgtggacaagtcagccgcctac
ctgcggaccctcaagattaaaggcgaggaggtgcctatcaccacggagatcgttgtcgtg
ccgaagaaagagatttgcgcacaatatgcaggcgtattcctaatgacgagcgaagcccgc
atgatgcggcccgtcatcaacctggccaccggacagctcgagctcatcgggaccatggaa
cagctgtacctggacatcgccgtcacacaccacgagatacacaagggtaaaacgacccat
gtggagttatcgcagacagcgttcatgagcaacctggcgcagctcgtgcccatgccagac
tgcaaccagtcgcctcgtaacatgtaccagtgccagatgggtaagcagacgatgggcacc
ccgatccacacgtggcgtacgaacgcggagaccaagttataccggctgcagaaccccgcc
acgcctctgttccgacccacacactacgacaacatcggcctggacgactacccctgtggg
actaatgctattgttgctgttatatcttataccggctacgacatggaagatgcgatgatc
atcaacaagtcggcctacgagaggggtttcggtgcgggttccgtatacaagtcggagttc
gtggagctggcccaccccgcctcctacttctgcagggaccaggctcgccaggacctggcg
cagtatatcgacgatgatggactgcctgccgtcggggctaggctacaacctgatgcgccg
ttctattctttctatgacgcggagaagaatatattcgtggtgagcaagtaccacgggaag
gaggaggtgttcgtggacagcgtgaggctctgcggggacttcagctcccggccgctgaag
aaggcttgcatcatgctgcggctgcagcgtaacccaaccgtgggcgacaagttcgcctcg
cgcgctggacaaaagggcatctgctctcagaagtgggctgccgaggacctgcccttcacg
gagtcggggttggtccccgacatcctgttcaatcctcacggcttcccgtctcggatgacc
atagccatgatgatcgagtgcatggcggggaaggccgccagtatacatggacatgtccat
gacgccaccccattccgcttcaacgagaaagacacagctatcaattacttcgggcgtttg
ctggaagcgtccggctacaactattacggaactgagcgcatgtacagcggcgtcgacggc
cgcgagatggacgccgatatcttcttcggagtcattcattatcagaggctcaggcatatg
gtgtctgataagtggcaggtccgcacgacgggcgcggtggacgcgctgacgcggcagccc
gtgaaggggcggcggcgcggcggcggcgtgcgcctcggcgagatggagcgcgacgcgctc
gcctcgcacggcgccgccttcctgctgcacgaccgcctgttccactgctccgacaagacg
caggccgtactgtgctcaaaatgtgggactctacttggcccaatggtgggcaagagcgac
tctacgaaggacacgtgccgtctgtgcggcgagggacacctggtctccgtggctatacca
tacatcttcaagttcttcgtgacacaacttgcgtgcgtcaatattaacgtcaaaatcaac
tgttcggaacatctgtccataactggctgctag
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