Trichoplusia ni (cabbage looper): 113495046
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Entry
113495046 CDS
T05757
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113495046
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113495046
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113495046
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
113495046
NCBI-ProteinID:
XP_026729428
UniProt:
A0A7E5VM76
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Position
1:12544924..12555830
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AA seq
603 aa
AA seq
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MDDDWDDGVGDVVVQSPALNNYDSNVDQGHSLSRGRGFQSFDENDYEVDKGSNGFGERRG
RGGRGGRGGGRGFRNGGTGSREPRDYENGEGEDRRDRGERGRGRGRGGRGGGRGGGSGGG
GDAPEIGEDGEPKKPPVTYVPPEPTDDEQTIFSSTISSGINFDKFDCIAVKVSGENPPRA
IESFETANLRKFVLDNILKAGYKKPTPIQKHAIPIIIGGRDLMGCAQTGSGKTAAFLLPI
INTLLQDQRELIVGPNGCAQPQVVIVSPTRELTLQIFNEARKFSYGSVLKIAVAYGGTAV
RHQGDNISRGCHILVATPGRLHDFVDRNRVSFDGIRFVVLDEADRMLDMGFIPSVEKMMD
HPTMVPVSDRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFHQVSKYE
KQTTLKKLIEENDRKRILVFVETKRNADFIAAMLSEQQMLTSSIHGDRMQREREEALDNF
KSGRHFILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDS
DQDIGLAADLAKILRQAEQPVPDFLQGGGTATYRGNKYGGSDIRDFNNSAPAADQGQEPE
EEW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgattgggatgatggtgtcggtgatgtggtagtacaatctcctgcacttaac
aactacgactcaaatgttgatcaagggcacagtctttcgagaggaagaggattccagtca
tttgatgaaaatgattatgaagtggataagggcagcaacggttttggagagaggcgcggg
cgcggcggtagaggcgggcggggaggaggccgtgggttccgtaatggtggaacaggtagc
agagaaccaagggattatgaaaatggcgaaggcgaggatagacgtgatcgaggcgagcgc
gggcgaggtcgtggtcgcggcggtcgcggtggcgggcgaggcggcggcagcggcggcgga
ggcgacgcgcccgagatcggcgaggacggcgagcccaagaagccaccagtcacatacgta
ccgccggagcccaccgatgacgagcaaaccatcttcagcagcaccattagctccggcatc
aactttgataaatttgactgcattgctgttaaagtgagtggcgaaaacccacccagagcc
attgaaagctttgaaacagcaaacttacgaaagtttgtgttggacaacattttgaaggct
gggtacaaaaaaccgacacctattcaaaaacatgccattccaattattattggtggccga
gatcttatgggctgtgcacaaactggctcaggcaaaacggctgcattcttactgcctatt
ataaacacattgcttcaagatcagcgagagcttatagttggaccaaatggttgtgcccag
ccacaggttgtaatagtatctccaactcgtgaactgactctacaaatattcaatgaagca
agaaagttctcttatggttccgttttaaaaatcgctgtagcttacggaggaactgcagtg
cgccatcagggggataatatttctagaggatgtcacatcttggtcgcaacacctggccgc
ctccacgacttcgtggaccgcaaccgcgtgtcgttcgacggcatccgttttgtagtgctt
gacgaagcagaccgcatgctggacatgggtttcataccgagcgtcgagaagatgatggac
catcctaccatggttcctgttagtgaccggcaaaccctgatgttttcggcaacattcccc
gaggacatccaacatttagccggcagattccttaacaattacctgtttgtagccgtcggt
attgtagggggagctagcactgacgtcgaacaaattttccaccaagttagcaagtacgaa
aaacaaaccacactgaagaagctgattgaagaaaatgatcgcaagcgtatcttggtgttt
gtggagacaaaacgtaatgcggatttcatagccgccatgctgtcggagcaacagatgttg
acgtcatcgattcacggcgaccgtatgcagagagagcgcgaagaagcactcgacaatttc
aaaagtggaagacacttcatacttgttgccaccgctgtcgccgctagaggactagatata
aagaatgtggacatcgtcgtcaattacgatcttccaaagagtatagacgagtatgtacac
agaattggaagaaccggtcgtgttggaaacagaggaaaagcagtttcgttctatgattct
gatcaagacattggattagcagcggatttggcaaagatcctgaggcaagctgagcaacca
gtcccagacttcctacagggaggcggcactgccacatacagaggcaacaaatatggtggc
agtgacataagagatttcaacaattcagcgccagctgctgatcaaggccaggagcctgaa
gaagaatggtag
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