Trichoplusia ni (cabbage looper): 113495244
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Entry
113495244 CDS
T05757
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113495244
04131 Membrane trafficking [BR:
tnl04131
]
113495244
04121 Ubiquitin system [BR:
tnl04121
]
113495244
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113495244
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113495244
Membrane trafficking [BR:
tnl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113495244
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113495244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
DUF5320
zf-C3HC4_2
zf-C3HC4
Zap1_zf1
zf-RING_5
FoP_duplication
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113495244
NCBI-ProteinID:
XP_026729676
UniProt:
A0A7E5VNE0
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All DBs
Position
6:15404436..15416966
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AA seq
368 aa
AA seq
DB search
MNSEKRNSRGRGRGRGRGRGRGRGRGRGKKVPKVMSSDEEECSVEETSQEQEESVVEEAK
EEPEPTEPAKLEVPSDISQLEAPVFTTLQRGPPEPMLRLDWSHRATLIGEKVLNPMIYCC
DICSKPILIYGRMIPCKHVFCLSCARAEHTHCPRCREKVLRVEQTGLGTVFMCTHSGTRY
GNTGCRRTYLSQRDLQAHINHRHVSSGAVENKPEPEPSSSAVAIVKPLPQLSASANDPRG
GHAHPHSHAHAAGERPRARTNLITVPIQDQTDNQHYYNYYPPPSGPVAPPSVAVLAHSMS
VPPPTYYAPAPPYSAPPTYGQPAGGSLPSSASGLAAGLAGLGGEARWAEGYSPALPVPQW
PAQHHYYR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgaaaagcgaaactctcgaggaagaggccggggtcgtggtcggggccgggga
cgcggtaggggcagaggccgagggaaaaaagtcccgaaagtgatgtccagtgatgaggaa
gaatgttctgtggaagagacttctcaggagcaagaagagagcgtcgttgaagaagctaag
gaggaaccagaacctaccgaaccagctaaactggaagtcccatcggacatttcccagtta
gaagctccggtgttcacgacactacagcgagggcctccagaaccgatgctgaggcttgac
tggagtcaccgcgccaccctcatcggcgagaaggtcctcaaccccatgatatattgctgt
gatatatgctcgaagcctatactcatatatggacgaatgataccatgtaaacatgtgttt
tgtctgtcatgtgctagagctgagcacacacactgcccaagatgtagagaaaaggttcta
agagttgaacaaactggattaggcacagtatttatgtgcacccactcagggacgagatat
ggcaacacaggctgtagaagaacttatttatcacagagagatctacaagctcacatcaac
cacagacacgtctcttcaggggcagttgaaaacaaacctgaaccggaaccgtcgtcaagt
gccgttgctattgttaaaccgttacctcagctgtcagcgtctgccaacgacccccgcggc
ggtcacgcacacccccacagccacgcgcacgcggcgggcgagcggccgcgcgccaggacc
aacctcatcactgtgcccatacaggaccagaccgacaaccaacactactacaactattac
cctccaccgtcaggcccggtggccccgccgtcggtggcagtactggcgcacagtatgagc
gtcccgccgcccacgtactacgcgcccgcgccgccgtactccgcgccacccacctacgga
caacccgcgggcggcagcctgccgtcgagcgcgtcggggctggcggcggggctggcgggg
ctgggcggcgaggcgcgctgggcggagggctacagccccgcgctgcccgtgccgcagtgg
cccgcgcagcaccactactacaggtag
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