Trichoplusia ni (cabbage looper): 113495443
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Entry
113495443 CDS
T05757
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113495443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tnl04147
]
113495443
Membrane trafficking [BR:
tnl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113495443
Exosome [BR:
tnl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113495443
Exosomal proteins of bladder cancer cells
113495443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
113495443
NCBI-ProteinID:
XP_026729963
UniProt:
A0A7E5VNQ1
LinkDB
All DBs
Position
6:4004998..4019454
Genome browser
AA seq
1238 aa
AA seq
DB search
MLTKFETKSARVKGISFHAKRPWVLASLHNGVIQLWDYRMCTLLEKFDEHDGPVRGICFH
IQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRQCISVLTGHNHYVMCAQFHPTEDLLVSASLDQSVRVWDFSGLRKKSVAPGPSGLA
EHLRNPQATDLFGQQLILQADAVVKHVLEGHDRGVNWAAFHPSLPLIASAADDRQVKLWR
MNDAKAWEVDTCRGHYNNVSCVLFHARHELILSNSEDKFIRVWDMTKRTCLHSFRREHER
YWVLAGHPSLNLFAAGHDAGMILFKLQRERPAYAVHNNMLFYIKDRQLRKLDMATNRDSV
VMQIKGGGRNQPYSMSLNHAEWCVLVNWRIGDNSSYELYVAPREGAAPAEPAPEPARGHA
STAVWVARNRFAALDKNNQLVIKNLKNEVSKKISTPTCEEIMYAGTGMLLLREPDSVQLL
DVQQKRTIASVKVAKCRYAIWNSDMSLVALLGKHTVTICSKRLEQLCSVTEGARVKSGAF
DDSTPQPVFIYTTANHIKYCCKDGDYGIIRTLDVPVYAVKVLASEAGARVVCLDRDCRPK
VLNIDPTEYRFKLALVTRQYDQVLHMVRTAKLVGQSIIAYLQEKGYPEVALHFVKDARTR
LSLALQCGNIDVALEAAKSLDEPAAWDQLAKAALASGNHQIVEMCYQRTKNFDKLSFLYL
ITGNLDKLRKMMKIAEIRKDVSAQFQGALLLGDVKETIRLLKSTGQTSLAYLTAINHNQV
EEAAQLRASLEAAGLAIPEPNPQAQLLRPPLPVHAAQPNWPLLAVSKSFFEVAGGARAAA
EQSGVAAAAALGDEPLEAAGAWGDDDDVLQDKEAEGEEGEEVMEDACDDGGWDVGDEDLE
LPEELAPVSADMDGGEEAAAYFVAPTRGASNALTAKLRTVHDHIATGQFEIALRLLNEQV
GVVQFAPYQSQFLSMFGRGRVSFAALASLPPLAAHLHRNWKEASGKDLLPVVTAKLNDLV
SQLQQCYQLTTAGKFTEAVERLQRIAQSVPLLHVDSKPELSEAQQLLNIAREYLLGLQME
TARKAMPKNTLEEQKRTCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNFRTAASFARR
LLELGPRPEVAQQARKILQACEKSLTDEHQLLYDEHNPFNICGISYKPIYRGKPEEKCPL
CGASFLPEHKGKLCPVCGVAEIGKDVIGLRICPLQFQR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaagtttgaaactaagtcggcgcgtgtgaaaggtatatcctttcacgcgaag
cggccatgggttttggcgagtttacacaatggcgtgatacagctttgggattatcgtatg
tgtacattactggagaaatttgatgaacacgacggccctgtccgaggaatctgcttccac
atacaacaaccgctctttgtgtccggtggagacgattacaagatcaaggtatggaactac
aaacagaggcggtgtttgttcacattacttggccatctggattacatccgcaccacattc
ttccaccatgagtacccctggatattaagtgcttctgatgatcagacaatcagaatatgg
aactggcaatcgagacaatgcattagtgtcctcactggtcacaaccattatgttatgtgc
gcacaattccaccccaccgaagatctcctagtctccgcttccttggaccagtccgtgagg
gtctgggacttctctggacttagaaagaagagtgtcgctccaggcccctcaggattagcc
gagcatttgaggaatccacaagcaacagatctttttggacagcaactgatcttgcaggcg
gatgctgttgtcaagcatgtgttggagggccacgataggggtgtgaactgggccgctttc
caccccagcctgcctctcatcgcgtcagctgccgacgacagacaagtcaaactctggagg
atgaacgatgctaaggcgtgggaggtggatacatgccgtggtcactacaacaatgtatcc
tgcgtactattccacgctcgccacgagttgattttgtccaacagtgaggataagtttatc
agagtgtgggacatgaccaagaggacttgcttgcattcgttcagaagggaacatgaaaga
tattgggtactagccggccacccatccctgaacctgttcgctgccggtcacgacgccggt
atgatcctgttcaagcttcagcgagagaggccagcctacgccgtacataataacatgctc
ttctatatcaaagataggcaactgcgtaaattggacatggcgacgaatcgtgattcagtt
gtgatgcagatcaagggaggcggacgcaatcaaccttacagcatgtctctgaaccacgcg
gagtggtgcgtgctggtgaactggcgcatcggcgacaatagttcgtacgagctgtacgtg
gcgccgcgcgagggcgccgcgcccgccgagcccgcgcccgagcccgcgcgcggccacgcc
agcaccgccgtctgggtcgcccggaaccgcttcgccgcgctcgacaagaacaaccagctc
gtaatcaagaacttgaaaaacgaggtatccaagaagatctcgactcccacatgtgaggag
atcatgtacgcgggcactggaatgctactcctcagggagccagactccgttcaactgctg
gatgtgcagcaaaagaggaccattgcttctgtaaaagtcgcaaaatgccgttacgcgatc
tggaactcggacatgtcgctggtggccctgctgggcaagcacaccgtgaccatctgcagc
aagcgcctggagcagctctgcagcgtgacggagggagcgcgcgtcaagtcgggggccttc
gacgactccacgccgcagcctgtcttcatatacaccactgccaaccatatcaagtactgc
tgtaaggatggtgactacggtataatccgcacgctagacgtgccggtgtacgcggtgaag
gtgttggcgagcgaggcgggcgcgcgcgtcgtctgcctcgaccgggactgcaggcccaag
gtgctcaacatcgaccccactgagtataggttcaagctcgctttagtgacacgtcagtac
gaccaggtattgcacatggtccgcactgctaaactagtgggacagagcatcatcgcttac
ttgcaggagaagggctaccctgaagtggccctacacttcgtgaaggacgcccgcactcgc
ctgtcgctggcgctacagtgcggcaacatcgacgtggcgctggaggccgccaagagcctg
gacgagcccgccgcctgggaccagctcgctaaagctgcactggcgtcaggaaaccatcag
atcgtagagatgtgctaccaacgtacaaagaacttcgataaactatccttcttgtacctg
atcacgggcaacctggacaagctgcgcaagatgatgaagatcgcggagatccgcaaggac
gtgtccgcgcagttccagggggcgctgctgctgggggacgtcaaggagaccatacggctg
ctgaagagcaccggccagacatccctggcctacctgacagctatcaaccacaaccaagtg
gaggaagctgcccagttgcgggcctctctagaggcagccggcctggccatccccgagccc
aacccgcaggcgcagctgctgcggccgccgctgcctgtacacgccgcgcagcccaactgg
ccgctgctggccgtgtccaagagtttcttcgaggtggcaggcggggcccgcgcggcggcc
gagcagtcgggcgtggcggccgccgccgcgctcggggacgagccgctcgaggccgccggg
gcctggggggacgacgacgacgtgttgcaggataaggaggcggaaggtgaagaaggtgaa
gaggtgatggaggatgcgtgtgatgacggcggctgggacgtcggtgatgaggacctggag
ctgcctgaggagttggcacctgtctcagcggacatggatggcggcgaggaagcggccgcg
tacttcgtagcgccaacccgcggcgccagcaacgcgctcaccgccaaactgaggactgta
cacgaccatattgctactggacagtttgagattgcacttagactcctgaacgagcaggtg
ggcgtagtgcagttcgcgccgtaccagtcgcagttcctgagcatgttcggtcgcgggcgc
gtgtcgttcgcggcgctggcgtcgctgccgccgctggccgcgcatctgcatcgcaactgg
aaggaggccagcgggaaggacctgctgcctgttgtcacggcaaaactgaacgacctagtg
agccagctgcagcagtgctaccagctgacgacggcgggcaagttcacggaagctgtggag
cgactgcaacgcatcgcgcagagcgtgccgctgctgcatgtggacagcaagcccgagctc
agcgaggcgcagcagctgctcaacatcgcgcgggagtacctgctgggcctgcagatggag
actgccaggaaagccatgccgaagaacacattagaggaacagaaacgcacatgcgagatg
gcagcctacttcacacactgcaagctgcagcccgttcaccagatcctgaccctacgaaca
gctctcaacatgttcttcaagctcaagaacttcagaacggcagcgtccttcgcccgacgc
cttctagaactcggccccaggcccgaggtcgcacagcaagcgagaaagatcctacaagcg
tgcgagaagtccctcacagatgaacaccaactgctatacgacgaacacaatccattcaac
atctgcggcatcagttataaacccatctacagaggcaagcctgaagagaaatgcccgctg
tgtggagccagcttcttgcccgaacataaaggcaagctctgccccgtctgcggcgtcgcg
gagatcggcaaggacgtcatcggcctcagaatctgtcctctacaattccagagataa
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