Trichoplusia ni (cabbage looper): 113495458
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Entry
113495458 CDS
T05757
Name
(RefSeq) PDZ and LIM domain protein Zasp isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113495458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tnl04990
]
113495458
Domain-containing proteins not elsewhere classified [BR:
tnl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113495458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
113495458
NCBI-ProteinID:
XP_026729984
UniProt:
A0A7E5VNV9
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All DBs
Position
6:12964987..13001153
Genome browser
AA seq
1707 aa
AA seq
DB search
MAQLITVRLNKADQQPLGFRLQGGKDFGTPLVVQKVNGGSAAERAGLQAGDALIRVNTTD
VYLLRHQEAQDAIRAAGGNLELTVQRGGGTWRPSVTPTGSLPRPGSRSIGSTPTLVTNTS
LKATPQPSRAFGSGHNNVAKPFGYMNGNDSVKSIVNKQYNTPVNMYSDKTIAETLSAQTE
VLAGGVLGVNFKKNEKTYDAEKSAVFKVLQEEQNDPEPEPSHFYSRASVARAGTPCSLHR
THRSRSRTPRVLAGTPQPPPPVARASTGTQTPQEQLAPEPPHRPSIPMGCHEVLPDGRIA
LGAPALPQPRDALPVVNDTPYCSDCNRYIIGVFVRIKDKNLHVECFKCSTCGTSLKNQGY
YNLNGKLYCDIHAKLVARNNPPAPNLEPVTVPPGSRIPSNTYSTPLPPLATNNYTNGSSS
LFSPSSNLSGPKPFGSSIGSAYSPSLSPRSAPMSPARPVTAPAPAPAPLVAPAPAPVPPP
AAPFAPTQNVKSIVWPPPANPSDDEPPKYDPSMKPAAPACGKEIISQSVNKIIKDTESNI
ANMQQQMEQFVTSSKQIEEFSSSVSYASAAMSSMTATTKSESIAQSKQSQIMQESTSQTI
QSYSQESSKCQSKTLYEAQTCPSKGDNPVSKIEKVQTIQSKEDVQSKISESKIVKISDPP
KVEDKRQVIQNTESNIECASQNVRQESNTNKPVESHEVVSNNEQVSQTKEAAVQNEVRGS
QVTAQLENKYNEKTNIQSETSKLGTMQTCNNPVSQQNVAGSLVDALTTAPDRPYSPLPQP
CQPISITGQPICEEKPVQHLEEQQIESQEMAEINRTQLPAQQSPMFMQEKRAVSPIPPIK
TYNPPEKVEPPVPMPAETKPYIPPDFKIVIEPKTPREAATTPLVEALTTAPDRPFTPITT
YEENPNRNQSISRGSLRDALTIAPDRPYSPFGTSTSTSQTNQYMTSTISLTETNLSDIVK
PIATQTTTQMTDHMHSEFSAMQNTCKLQSSSEMSAFRPVPKQVFPPPQPEEFCMLQNFPP
ISNELKTSFTQATKTKQETSYSESMMMQQSSLSTTMASQGYSSVKTAQNYFEQLDKKESL
TSTAVRSKSGLHKPDSIPPYQRNFEQLPSQRGISPDMYNAPAVLQRPVTPTTNPPTRPKE
KSLEPNPQAQPQSHYVSPQVQPQRVPQIKTPVQQPPVQFRKETPITMTFQPVTDDNFMRV
TSSPVPRSSRPTTPSSMINKPAPIIPHYQMNLVTVEHLAPESHLYEPSSREGSRSPTPKP
RSRSPAQGPPPNPLKAQAPRIKDPQPQYYSSDSYVSQDATNLQRQHEMDQRNFQTAAEIY
NTGATKSWGQSQQSQPCMVKEQKHSNVGYKSENYTKGDMKFKEDSLVQENYGQRQMQSQN
VIEQGNTTVHTTRKTFEEFERKQSAKVVEIRKGGSSFSGAYEENVDSNIRPSNINPKQVF
PPPMMSLPPTQQSSSLNLTNQNMQSANRTIDNYDPKPSISGANLGPVCDPTPSTGSSVGA
AARGKTFGVSSAPKRGRGVLNKAALPGSRVPLCASCNGHIRGPFITALGRIWCPEHFICV
NATCRRPLQDIGFVEENGQLYCEFCFEQYIAPACDKCHAKIKGDCLNAIGKHYHPECFNC
VYCGKLFGNNPFFLEDGLPYCEADWNDLFTTKCFACGFPVEAGDRWVEALNNNYHSQCFN
CTVCKKNLEGQSFFAKGGRPFCKTHAR
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcacagttaataactgtgcggttgaacaaagccgaccaacagcccttgggtttccgt
ctgcagggcggcaaagacttcggcacacctcttgttgttcagaaggtaaatggtggtagt
gcagcggaacgcgctggtctccaggctggcgacgccctgatccgcgtcaacaccactgac
gtatacctgttgcgtcatcaagaggctcaggacgccatccgcgccgctggaggcaacctc
gaactcaccgtacaacgtggaggcggcacttggcgtccgtccgtcactccgaccggcagc
ctgcccaggcctggttccagatccatcggcagtaccccgaccctcgtcaccaacacctcg
ctcaaggccacgccgcaaccatcccgcgcttttggctccggacacaacaatgttgctaaa
ccctttggctacatgaacggcaacgactcagtcaagagcatagtgaacaaacagtacaac
acccctgtcaatatgtacagcgacaaaaccatcgcggagacgctctcggcgcaaactgaa
gtcctggctggaggagtcctgggagtgaactttaagaaaaatgagaagacatacgatgca
gaaaaaagtgccgttttcaaggttctgcaagaggaacagaacgaccccgaaccagagcct
tctcacttttactcgcgagcgagcgtggcgcgcgcgggcacgccgtgcagcctgcaccgc
acgcaccggtcgcgctcgcgcacgccgcgcgtgctggcgggcacgccgcagccgccgccg
cccgtggcgcgcgccagcacgggcacgcagacgccgcaggagcagctggcgcccgagccg
ccgcaccggcccagcatccccatgggctgccacgaggtgctgccggacggccgcatcgcg
ctcggcgcgcccgcgctgccgcagccccgcgacgcgctgccggtcgtcaacgacaccccc
tattgctccgactgtaatcgctacattatcggtgtgttcgtgcgcatcaaggacaagaac
ctgcacgtggaatgcttcaagtgctcgacgtgcggcacttcactcaaaaatcagggctac
tacaacctgaacgggaaactgtattgtgacattcacgctaagctcgtcgcccgcaacaac
ccgcctgcgcccaatcttgaacctgttaccgtgcctcctggcagcaggatccctagcaac
acatactcgactccgctgccaccactggcgactaacaactacaccaatggatcgtcttct
ctgttcagcccatcaagcaacctgtctggaccgaagccattcggatcctcaatcgggtct
gcctactctccatcgctgtctcctcgctcagcgccgatgtcgcccgcgcggccggtcacc
gcgcccgcaccagcgccggccccactggtcgctccagccccggcccctgtacctccacca
gcggctccattcgcgcccacacaaaatgtaaaaagcattgtgtggcccccacccgccaat
ccctctgatgatgaaccgccaaagtatgaccccagtatgaagcctgcggctcctgcttgt
gggaaagaaattatatcgcagtcggtcaacaaaatcattaaagacaccgaatcaaacatt
gcgaatatgcaacaacaaatggaacaatttgtaacatcttcaaaacaaatagaagaattt
tcatcaagtgtttcgtatgcttctgcggcaatgtcttctatgactgcaaccactaaatcc
gaatctattgcacaaagcaaacaatcccaaataatgcaagaatctacgagtcaaaccata
cagtcgtattcacaggagtcctcaaaatgccaaagtaaaactttatatgaagcacaaact
tgcccttcaaagggcgataatcctgtaagcaaaattgaaaaagttcaaaccattcaatct
aaagaagacgtacagtctaaaatttctgaaagcaaaattgtaaaaatatctgatcctcca
aaagttgaagataagagacaagttattcagaatactgaatctaacattgaatgtgctagt
caaaatgtaagacaagaatcaaacactaataaacctgtagaaagtcatgaagtcgtaagt
aataatgaacaagttagtcaaacgaaagaagctgcagtgcagaatgaagttcgtggatca
caagttacggcacaactagaaaataaatacaatgagaaaaccaacatacaatcggaaact
tctaagttaggcactatgcaaacctgcaataacccggtatcccagcaaaatgtggcagga
tcactcgtagatgcattaacaactgcaccggatcgcccatattcaccattacctcaacct
tgtcagcctatcagtataaccggacaacctatatgtgaagaaaaaccagttcagcattta
gaggaacaacagatcgagtcacaagagatggctgaaataaatagaacgcagttgcctgca
caacaatcaccgatgttcatgcaagaaaaacgtgctgtttcaccaataccacccataaag
acatacaaccctcccgaaaaagttgaacctccagttccaatgcccgcagaaacaaaacca
tacataccacccgattttaaaatagttatagaacctaaaacaccacgcgaagcagcaacg
acgcctttagtggaagctttgacaacggcgcctgatagaccatttacgccaataaccacc
tatgaagaaaacccaaatcgcaatcaatcaatatcaaggggatcgctaagggatgcccta
actattgctccagataggccttacagtccatttggtaccagtacaagtactagtcaaaca
aatcaatacatgacaagtactatttctctgacagaaaccaacctatctgatattgtcaaa
cctattgcaactcaaacaacaactcaaatgactgatcatatgcattctgaattctcagcg
atgcaaaatacgtgtaagctgcagtcatcttctgaaatgtctgcctttagaccggttcct
aagcaagtatttccccctccgcaacctgaagagttttgcatgctgcaaaactttcctcct
attagtaatgaattaaaaaccagcttcactcaggcaaccaaaacaaaacaagaaacatct
tattcagaatcaatgatgatgcagcagtcttcactctcgactactatggccagtcaaggg
tattcttcggttaaaacggctcaaaattattttgaacaattagacaaaaaggaatcacta
acttcaactgcggttaggtctaagtctggattgcataaacccgatagtattccaccttat
caaagaaactttgaacagctgccttcacaaagaggaatttcaccagatatgtataatgct
cccgcagttttgcaaagaccggttacgccaacaactaacccacccactaggccgaaggaa
aaatcgcttgaaccaaatccacaagcacaaccgcagtctcactatgtctctccccaagta
caaccgcaaagagttccacaaataaaaactcctgttcagcagcctccagtacagttccgt
aaagaaactcctattactatgacatttcaaccagttactgatgataacttcatgagagta
acaagcagtccagttcctcgcagtagtcgtccaacaactccaagtagtatgattaacaaa
ccggcgccgattattccacattatcagatgaatttagtaactgtagaacatttggcccca
gagagccatttgtatgaaccgtcaagtcgagaaggcagcaggtcgcctacgccgaaacct
agatctcgatcacctgcgcagggtcctcctccgaacccgttgaaagctcaagcaccacgc
attaaagatccacaaccacaatattattcatcggattcatatgtttctcaagatgctaca
aacttacaaaggcaacatgaaatggatcaaaggaacttccaaaccgcagccgaaatttat
aatactggtgcaactaagagctggggacaaagtcaacaaagtcagccttgcatggtcaaa
gagcagaagcattcaaacgtcggatacaaaagcgaaaattatactaagggcgatatgaaa
tttaaagaagactctttagttcaagaaaattacggtcaaagacaaatgcagtctcagaat
gttatagaacagggaaataccacagtacatacgactagaaaaacatttgaagaatttgaa
agaaagcaatcagctaaagtagttgagatcagaaaggggggttcatcattttctggggca
tacgaagaaaatgtggactctaacattcgaccttccaacattaacccaaaacaagtgttt
ccaccacctatgatgagtttgccacctacacaacagagttcatctcttaaccttactaat
caaaatatgcagtccgccaatagaacaatagacaattacgatccaaagccttcgatttct
ggtgctaacctaggtccagtgtgtgatcctaccccatcgacaggttcgagtgtaggagct
gccgctcgtggcaaaacttttggtgtttcctccgcaccaaaacgaggaaggggtgttttg
aataaagctgcgctgcccggctcccgtgtcccactatgcgcttcctgtaatgggcatatt
aggggaccattcattacggctttgggccgcatctggtgtcctgagcacttcatttgcgtg
aacgctacgtgtaggcgcccgcttcaggacatcggtttcgttgaagaaaatggtcaacta
tactgtgaattctgttttgaacagtacatcgcccctgcctgcgataagtgtcacgccaaa
attaagggcgattgcttaaacgctatcggcaagcactaccacccagaatgcttcaactgc
gtatactgtggaaaactgttcggaaacaaccccttcttcctggaagatggtctgccatac
tgtgaagctgattggaacgacctgttcacgacaaaatgtttcgcttgcggcttccccgtg
gaggcaggcgacaggtgggtcgaggcgctcaacaataactaccacagtcagtgcttcaac
tgcacggtgtgcaaaaagaatctcgaaggacagagtttcttcgccaagggaggtagacct
ttctgtaaaactcacgcccgctag
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