Trichoplusia ni (cabbage looper): 113495531
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Entry
113495531 CDS
T05757
Name
(RefSeq) LOW QUALITY PROTEIN: GRB10-interacting GYF protein 2-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113495531
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113495531
Surveillance factors
Other surveillance factors
113495531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Collagen
TRI4_N
Motif
Other DBs
NCBI-GeneID:
113495531
NCBI-ProteinID:
XP_026730088
UniProt:
A0A7E5VP23
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Position
7:13067200..13092821
Genome browser
AA seq
1625 aa
AA seq
DB search
MGDRNNPIKFGPEWLRKMSSKRTSGTSSNPDQNASSSSGASGTTGPPATAGTPSSSGNSG
SAGSSGPAASSGPSGSSGPSGSSGGATANASASTNASANTSNKRNAMILLAKLRYGREEM
LALYDRNAEAPQELRYNETLYQQRGKQPIALNNTFEDDVRDNLRTAPPIGGMISSDRFTI
GRGSGRGVGIVNDGRGRTRGSYIRQMSAGRGANWHVGTPRMPTYSGGADDDSGPSRPWAN
NNSNNSNRNSGDQTDWSTKVFRNKRQGNNTNWRQPQSRDEGEEWRSPEPGRSRQHEKWDR
EWSERSGGDRPQNWNSNRRPWVGGDNQNNEENLPEWAGENAECGGTFDSSGAFHGYSNDD
TNLPKHQDASYPLTRSHTHGSFSRPKALEEGSEEWWASEKAKKLSPKRFDASDLKFKKQP
GIGIADVATSSTNHKSSTSKEEASQPPQETVESQAAGPEPPEANATAQGEDKSGKQSAFK
SNKFTESKTFDALMRSDINLGEASDERSNFQSVIINSNNSLRQKHQHLVPALNEGSLKQL
EQYQTNLNKNNKGEIEHPSHLSAEEIIVDNLFGMTLDEKDMLTSSSNSLMTLSSSGMSSG
LVSVENSMPQNLNLQMSMSNSALTEQGMNMELHMNQQSGQTAVTQSLHQSAGLQPGVLNS
SGLRGGLQSGIPGMQTGLQMPGMPAGIQAPNLPSGMSNSGYPMQTPRMPTGSLQNMPSGL
QGPRVQTPGMQPVLQNVGITNSALNASLGLPIGPTIGMPMQGMPQQILPNDIMANNASMG
ATGMGVMGSGSIQGSGNLPRFPTGNAMPGMPSNVGNASLLFGQNSSSPVMSSSNDLPMSN
HGGQNNMFHLHGMQHSGSQDPFANSIYSDNALAEQWYYEDPERNIQGPFPSKDMYNWYRA
GFFSPSLMVRRACETMMRPLGSYGPTVPFAQLNMMSPFPMSGGFERPQGAHQNMLSSQNP
LRLDVMNLGNMNLSDNPPMDSLQYGSVGLTANQSFGQPQPMDTLWGQPSSSSDVWMQQPL
TRPEVNNLPIYFWEQQPSAISSNSLLSEDITKEMKTEDQILAQLRASQGLAPPPQPFIPD
LPGPAAQASMPEDCFTTQVNATPNMEELHKLIQKDMLTGSVSVAEIEAELQTKSDKTSKQ
EQTANEINVTKASSQAKIAAETKPTKQVKETEKSAKAKDNSTKTKTKKTKDDKKEELAEI
KTKEDDLFKAEKRSQEPSPSKNKKEDKSNKKDLEKEKKEWIKEGFTIVKGSEKSSSKDNK
KKAEEARIAEEAERKRKEEEKFTADEDKKKKQAETVKKQQEQQIQLQQQQQRQVSESVVK
KAPWSAVSNQAMQATNRDGLTLAEIQRLEREKKLEQMKEQQQMMQIIAQQQAAALAREQE
MQAGLGWAKKKGSNQTQAPTLTEIQAETRKQAAVAAAVAAATKMIEEADSPQPQINHAPW
ANTHNGGGFWDTPPNQSSKDKQQDSQKSSEAKSKKKPNLVTSSKKENSPAVEFETWCTGV
LTSWSSKIDVPTFVGFLKDIESPYEIKDYVKCYLGESKESNDFARQFLERRSKLLRVGMV
TPSDDLCSPAIAVNPRTTSGSDYQEVKGKGKKTKKNKMLKVDARILGFSVTAAEDRINVG
DIDTV
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgtaacaatcccatcaagtttgggccagagtggttacgcaaaatgtccagc
aagcgcacctcaggcacatcctctaacccagatcagaatgccagctctagctcaggcgcc
tcgggaacaaccggcccgcccgctacagccggcactcctagttcatctggaaattctggt
tcagccggttcctctggccctgctgcctcgtctggcccttccgggtcgtccggcccttcg
gggtcgtccggaggggccactgcaaacgccagtgcatccaccaatgcatcagcgaacaca
tcaaacaaaagaaatgcaatgatattgctagctaagctgaggtatggaagagaagaaatg
ttagcactatatgacaggaatgcagaagctccgcaggagttgagatataatgaaacatta
tatcaacagcgcgggaaacagccaattgcactaaataacacatttgaagatgatgtaaga
gacaatttgcggactgctccaccaattggtggtatgatatctagtgacagatttaccata
ggacgtggttcaggtcgaggcgtcgggatcgtcaacgatggacgtggaagaacccgcggg
tcttatatcaggcaaatgtctgcaggaaggggagcaaattggcatgtgggtactccgaga
atgccaacctatagtggaggggcagatgatgacagtggccccagtcgaccctgggctaac
aacaatagcaacaacagtaacagaaacagtggcgatcaaacagactggtccactaaagtg
tttagaaacaaaaggcaggggaataatactaactggcgacagccgcagtctcgggatgaa
ggtgaagagtggcgctcacctgaacccggcagatctcgtcaacacgaaaaatgggatcgc
gagtggtctgaaagatctggtggagacagaccacaaaattggaactccaatagacgcccg
tgggtaggaggtgacaatcaaaacaatgaagagaacttgcctgaatgggctggtgaaaat
gcagaatgtggtggtacttttgattcgtcaggcgcattccacggctacagcaatgatgac
actaatttgccaaaacaccaagatgcttcgtatccattgacgcgatcccatactcatggc
agtttttcacgtccaaaagcattagaagaaggctctgaagaatggtgggcttcagagaag
gctaagaaattatcaccaaaacgctttgatgccagtgatcttaaatttaaaaagcagcct
ggaattggaatagctgacgtggctacttccagtacaaatcataaatcaagcacaagtaaa
gaagaggcatcccaaccgccacaggagactgttgaatcacaagctgctggaccagaaccc
ccggaggccaatgccacagcgcaaggtgaagacaaatctggcaaacaaagtgcattcaaa
tctaataagtttactgagagcaaaacttttgacgcactcatgaggtctgatattaattta
ggggaagcaagtgatgagaggagcaacttccaatctgtcatcataaactcgaacaacagt
cttcgtcagaagcaccagcacctcgtcccggcgttaaatgagggttcacttaaacagctg
gaacaatatcaaactaatttaaacaaaaataataagggcgaaatagaacatccatcgcac
ttatccgctgaagaaatcatagtagacaatttatttggcatgactcttgatgagaaggac
atgcttacatcttcttctaattcattaatgaccctttcaagttcaggcatgtcatcagga
ttagtttccgtggaaaattcaatgccccaaaatctgaacttgcaaatgagtatgtcaaat
tctgcattaaccgagcagggaatgaatatggagttgcatatgaaccaacaaagtggtcaa
acagctgtcacacaatctttacatcagtcagctggcttgcagccaggcgttctgaattca
tctggtttgcgcggtggtttgcaatctggcatacctggtatgcagacaggcttacagatg
cctggtatgccggctggtatacaagctcccaatctgccttctggaatgtcgaattctggt
tatcctatgcaaactcctcgaatgcccacaggctccttacaaaacatgccttctggcttg
caaggtccccgtgtacaaacaccaggcatgcaacctgttcttcagaatgttggaataact
aattctgcattgaatgcctcactaggtttgcctattggccctactataggaatgcctatg
caaggcatgccacaacagatcttgccaaatgatattatggctaataatgcttccatgggc
gccactggaatgggcgtaatgggttcaggatcgattcagggttctggtaacttgcctcgt
tttcctactggaaatgcgatgcctggaatgcctagcaatgttggtaatgcctcattgtta
tttggccaaaattctagtagtccagtgatgtcatcttctaacgacttaccaatgtccaac
catggtggtcaaaataatatgtttcatctacatgggatgcaacattctggatctcaagat
ccatttgcaaattcaatctatagcgataatgctttagccgagcaatggtattatgaagat
cctgagaggaatattcaagggccattcccttcaaaagacatgtataactggtacagagct
ggtttcttcagtcctagtttaatggttcgccgagcatgtgagacaatgatgagacctctt
ggctcctatggacctactgtacccttcgctcagctgaacatgatgtcgcccttcccgatg
tctggtggattcgaacgacctcagggagctcatcagaacatgctcagttcacaaaatcca
ctgagactagatgtgatgaatttgggtaacatgaatttgtctgataatccacctatggac
tctttgcaatatggatctgtgggactcacagcaaatcaatcatttggtcagccgcagcca
atggacacactgtggggccagccctcctcatcatctgatgtatggatgcaacagccactg
acccgtccagaagtcaacaacttaccaatttacttttgggagcaacagccttcagccatc
agttccaattctctgctaagtgaagacataactaaggagatgaagacagaagaccagata
ctggctcagttgcgagcgtcacagggcctggcgccgccgccgcagcccttcatccccgac
ctgccaggacctgccgcacaagcttctatgcccgaagactgcttcacaacacaagtcaac
gctactccaaacatggaagaactgcacaaactcatacaaaaagatatgttgactggcagc
gtgagcgtggcagaaatagaggccgagctccagactaaatccgataaaacttcgaagcaa
gagcagaccgccaatgaaatcaacgtaacgaaggcgtcgtcgcaggctaagatcgcggca
gaaacgaagcctaccaagcaggtcaaggaaaccgaaaagtctgctaaagccaaggacaac
tctactaagactaagaccaagaagacgaaagatgacaagaaagaagaactcgctgagatt
aagacaaaagaggatgatttattcaaggcagagaaaagatcacaggaaccatccccatcc
aagaacaagaaagaagataaatcaaacaagaaggacttggaaaaagaaaaaaaggagtgg
atcaaagaaggatttacgatcgtgaagggttcagagaaaagttccagcaaggataataag
aagaaggctgaggaagcccgcatcgcagaggaggcggagcgtaagaggaaagaagaagaa
aagtttactgccgacgaagataagaagaaaaaacaggctgagacagtaaaaaaacaacag
gagcaacagatccaactgcagcaacaacagcagcgtcaggtgtcagaatctgttgtgaag
aaagctccgtggtcagctgtttccaaccaagcgatgcaggccacaaaccgggacgggctc
acgctcgccgagatacagcggcttgaacgcgagaagaagttagaacagatgaaggaacag
cagcagatgatgcagatcatcgcacaacagcaagccgcggcattggctagggaacaggaa
atgcaagcaggtttgggttgggcaaagaagaagggttccaaccaaactcaagctccgact
ttaactgagattcaggctgagacgcgcaagcaagcagctgtggcggcagcggtcgccgca
gccaccaaaatgattgaagaagcagactctccgcagccgcagataaaccatgctccttgg
gccaacactcacaacggaggaggtttttgggatacacccccgaaccagtcatctaaggac
aagcaacaggactcgcagaagtcatctgaggccaaaagtaagaagaagcccaacctcgtg
acctcatccaagaaggagaactctccggccgtagagttcgaaacttggtgcactggagtg
cttacttcgtggagctctaaaattgatgtgccgactttcgttggtttcctgaaggatatt
gaatcaccatatgaaataaaggactatgtcaaatgctacctgggtgaatcgaaggaatct
aatgattttgctcgccagtttctagaaagaagatctaagttacttcgggtggggatggtg
actccatcagacgacttgtgctccccagccatagcggtgaaccctcgcactacctccggc
tccgactaccaggaggtcaaagggaaagggaaaaaaactaagaagaataagatgctgaag
gtcgacgcgcgcattctgggattctcagtgaccgccgcagaagatcgcatcaacgtgggc
gacatcgacaccgtgtga
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integrated database retrieval system
