Trichoplusia ni (cabbage looper): 113496328
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Entry
113496328 CDS
T05757
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113496328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113496328
03036 Chromosome and associated proteins [BR:
tnl03036
]
113496328
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113496328
Coactivators
SAGA/TFTC/STAGA complex
113496328
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113496328
STAGA complex
113496328
TFTC complex
113496328
SAGA complex
113496328
SLIK complex
113496328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_TEP1_C
TFIID_NTD2
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
eIF2A
Ge1_WD40
WD40_like
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
113496328
NCBI-ProteinID:
XP_026731293
UniProt:
A0A7E5VSG9
LinkDB
All DBs
Position
8:complement(7201265..7204867)
Genome browser
AA seq
648 aa
AA seq
DB search
MSLMKKTRNDAIKAAVTSYLERRNYPDIEVFSNNNNLSRSAEQMAVATIVQCEASRANSI
LFSCINNDSSQYDIQYTRLVTFIKEIKNEKVKNELLGLLCPLLCHLYLEMLRGGHGGPAQ
MFLKRHAAALPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQI
LDDIGSIYTLQEVETRPSIAAFRSCKYDISLSQDALNMLKAYLAKHGHVLLIQVLQTWFH
IDINNDPNKKNSEDDEEEMEEEVNVTRTNSEEKITDTNDIFAECNGHAEYQSIDKELKDL
QDAIKAVRDSTTPLKLYKISAPDTHLVCAKTDQHCNMLCGGFSNSEIRLWDLGHNNIKRR
VNRNISEVELACHVPHDLMPEDNTLQIGAGIPLRGHSGPVQAVCVLTKEELVVSASHDNT
IRAWNLTDYSCAAIYRGHNYPIWCMDVSKNGLFIVTGSHDRTAKLWSLSRTFPIRVFVGH
MSDVTCVKFHPNELYIATGGADRTVRLWTISDGRLVRVLCGHRGVVRTLAFAPSGSYLAS
AGDDKKIKVWDLAACTCIHEYKGHHGKVTALDWSSIGKPSLTNRNASPDNSLLCSSGMDG
VVKVWDCNSKNKQISSQDVQTSTYNTKCSYLVDVQVHPEWVVAIGTKR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatgaaaaagactagaaatgatgctattaaagcggcggtcacatcctactta
gaacgacggaattatcctgacatagaggtgtttagcaataacaataatctgagcagaagt
gctgaacaaatggctgtagccacgatagttcagtgtgaagcgagtcgcgccaattcaatt
ctgttttcttgcattaacaacgactcaagtcaatacgacattcagtacacaagattagtt
accttcattaaagagattaaaaatgaaaaagttaagaatgaacttctgggtttattatgc
ccactgctttgtcatttatatttagaaatgctgcgaggtggtcatggaggaccggctcaa
atgttcctgaagagacatgctgcagcattacctcagaaagacttgtcataccatcagcct
atagatggtaacctaccatcagctttgtataggccaaatagtttagagcagttatttaat
tccttacaaaatggcacaattgacaatgaaacacctgagaaagattacatgaatcaaata
ctagatgatattggctcaatttacactttgcaggaggtagagactaggccttcaattgct
gctttcaggtcttgtaaatatgacattagcctttctcaagatgctctaaatatgttaaag
gcatacttggccaaacatgggcatgtgcttctcatacaagtattgcaaacatggttccac
atagacataaacaatgacccaaataaaaagaactctgaagatgatgaagaagaaatggaa
gaagaagttaatgttacaagaactaattcagaggaaaagataacagatacaaatgatata
tttgcggaatgcaatggacatgctgaatatcaaagtatagataaggaattaaaagatctt
caggatgcaataaaagccgtaagagattctactacgccactaaagctttacaaaatatct
gccccagacacacacttagtatgtgcaaaaacagaccaacattgcaatatgttgtgtgga
ggattcagcaattctgagattcgattatgggatctaggacataacaatatcaaaaggagg
gtaaatcgaaatatatctgaagttgaattagcatgccatgtaccacatgatttgatgcct
gaagataatacattgcaaataggagcaggtataccattgagggggcattcaggtcctgtg
caggctgtctgtgtactcactaaagaagaattggttgtatcagcctcccatgacaacaca
ataagggcttggaatctgacagattattcctgtgcagcaatatacagaggtcataattat
ccaatatggtgcatggatgtatcgaaaaacggtctctttattgtaactggttctcatgac
aggacagccaagctatggtctttaagtagaacatttcctataagagtgtttgtgggccat
atgtctgatgtgacttgtgttaaattccatcctaatgaattgtatatagctacgggggga
gcagatcgtacagttcgtttgtggacaatatctgacggaagactagtgcgtgttctgtgt
ggacaccgcggcgtagtcaggactctcgccttcgcaccctctggctcctatttagctagt
gctggcgatgataagaaaattaaagtgtgggacttggcagcatgcacttgcatacatgaa
tataaaggtcatcatgggaaagttactgccttggactggtcatctattgggaaacccagt
ctcacaaaccgaaatgcatcaccagataactcacttttatgctcctcgggcatggatggt
gtagtcaaagtatgggattgtaattccaaaaacaaacaaatatccagccaagatgtccaa
acatcaacatacaatacaaaatgttcgtatttagttgatgtgcaagtccatccagagtgg
gttgtagctattggtacaaagagataa
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