Trichoplusia ni (cabbage looper): 113496474
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Entry
113496474 CDS
T05757
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113496474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113496474
03009 Ribosome biogenesis [BR:
tnl03009
]
113496474
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113496474
Spliceosome [BR:
tnl03041
]
Complex A
U1 snRNP components
U1 related factors
113496474
Complex B
113496474
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113496474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113496474
NCBI-ProteinID:
XP_026731519
UniProt:
A0A7E5VT89
LinkDB
All DBs
Position
1:complement(14107128..14110068)
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AA seq
539 aa
AA seq
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MALNIVTKLLIRRSARRLVLDCSHQHLSEVTSFNIIKTISVPYSTSSLKQNLFTLKFKPH
LQRFFATVPAQKGDIANYRNENNITVIGEDIPDPYTEIDQSKFPEYVKSFLKDQGFSKPT
VIQSQGWPIAMSGQNFVGIAQTGTGKTLAYLLPAVVHIKEKKARKGRGPIVLVLAPTREL
ARQIEQVAKDFERALNIRCLCIYGGASRSVQAQKLNEGVDILIATPGRLNDFIVSKTTSL
HRTTYVVLDEADRMLDMGFEPQIRQALEGVPLERQILMFSATWPKEVRHLAKDYLGEFVQ
VNVGSTELSANHNITQRIHICDQDDKMNLFKSIIHDISGEGFGKMLIFTNTKRFVDTLAL
TLRQNGWPADGIHGDKTQLQRDRIIGKFKHGQTNILVATDVAARGLDVDGVTHVINYDFP
NTSEDYIHRIGRTGRHDKKGVSHTILTEENARQAKSLIEVLKEANQDIPKELSDLARSYN
ELKDKERQAKWKPKPYGKQYNRQYNNQYGSQYNNQYDNQYGGNKRFNRHRSIRNRYEDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatatagtaacaaaacttttgatacggaggagtgcacggagactagtgtta
gattgctctcaccaacatctctcagaagtgacttctttcaacattatcaaaactatcagt
gttccgtattcaacaagcagtctgaaacaaaatttattcacattaaagtttaaaccacat
ttgcaaaggttttttgcaaccgttccagcacagaagggtgatatagctaactatcgtaat
gaaaacaacattacagtgattggagaagatattcctgatccttacacagagatagaccag
agcaaatttcctgaatatgtcaaatcatttcttaaagaccagggtttttctaaaccaact
gtgatacagtctcaaggatggcctattgcaatgagtggacaaaattttgtgggtattgca
caaactggcactggaaagacattggcttatttactaccagctgtagtgcatattaaagag
aaaaaggcaagaaagggtcgtggtcccatagtattagttctagcaccaactagagaactt
gctcgtcagattgaacaggttgccaaagattttgaaagggctttaaatattcgttgtctt
tgtatatatggaggagctagtcggtcagtacaagcacaaaaacttaatgaaggagttgat
atactaattgctactccaggcagattaaatgacttcattgtcagtaaaacaacatctctg
catcggaccacatatgttgtattagatgaagcagacaggatgttggacatgggatttgaa
cctcaaattcggcaagctttggagggtgtgccacttgaaaggcagatattgatgttctct
gccacatggcctaaggaggtcagacacttagctaaagactacttgggagagtttgtccaa
gtgaatgtagggtcgacagagctctcagcaaaccataacataacacaacgtatccacatt
tgtgaccaggatgataaaatgaacctgtttaaatctatcatacatgatatatctggtgag
ggatttggcaaaatgttaatatttactaataccaagaggtttgtcgacaccttagctttg
acactgaggcaaaatggctggcccgcggatggcattcatggtgataaaacacagttgcaa
agagacagaattattgggaaatttaaacatggccagaccaatatcttagttgctactgat
gttgctgccagaggtttggatgttgatggtgtaacacatgtgattaactatgattttccg
aacacatctgaggactatatacataggataggccgcactggacgacatgacaaaaaaggt
gtctcacatactatacttactgaggagaatgcaagacaagcaaagagtttgattgaggtt
cttaaggaggccaatcaggatattccaaaggaactcagtgatcttgcacgttcatacaac
gaattgaaagataaagaaaggcaagcgaaatggaaacccaagccctatggcaaacaatat
aacagacaatataacaaccagtatggcagccaatacaacaaccagtacgacaaccagtat
ggcgggaacaagcgctttaaccgacacagaagtatcaggaatagatatgaggattattaa
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