Trichoplusia ni (cabbage looper): 113496482 Help Entry 113496482         CDS       T05757                                  Name (RefSeq) DNA ligase 3   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism tnl  Trichoplusia ni (cabbage looper) Pathway tnl03410   Base excision repair Brite KEGG Orthology (KO) [BR:tnl00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     113496482  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tnl03400]     113496482 Enzymes [BR:tnl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113496482 DNA repair and recombination proteins [BR:tnl03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      113496482 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C LIG3_BRCT RNA_ligase DUF6649 mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  113496482 NCBI-ProteinID:  XP_026731523 UniProt:  A0A7E5VT52 LinkDB All DBs Position 8:4175605..4180771 Genome browser AA seq 934 aa AA seqDB search MGDSTPFFVDRAKGGRASCKGCKSSCPGGELRIAKLVASPYGDGQHMKSWHHVDCFMNVL LKQRPATKRVDSIDDIGNWENITKDDQEFILKKLNEMEKTYAEKNSGKYTAKVLKNISNP SSKTTSATKNNDSTDSSKDLSIEVKTDDNNFETFFKLTKKIAQVDAYTDKTAVVNNFFRN GTDNQSFKGDLTLWCKLLCPQATKRVYNLKSKQLVKLFSRIFNCDHDDMLTHLEQGDVAE TIQHFFKKSKAVSPAADSTLTIHQVEDFLAELSKLTREDEQTYHFKKIVKKCTTFDLKML IRLIKGDLRINAGLKHILEGVHPDAYSLFQTSRDINMVLDRVMSESNTVKHKDAIQKSLR AQLSLMTPVLPMLAEACKSIDMAMKKCPNGMFSEIKYDGERVQVHKQGKVFKYFSRALKV VMAHKVSHFEEYLPQAFPKGNDMILDAEVLMVDVKTGKPLPFGTLGIHKQSKFKDASVCL YIFDCLYYNGEVLMDMPIRKRRQILYDNMVEVPNHVMFSEQKLIEKPADLAKMIAKVLEL GLEGLVLKDLESTYEPGKRHWLKVKKDYLFDGAMADTADLVVLGAWFGTGKKGGMMSVFL MGCLDVRRNIWVTVTKVHTGHDDSTLSRLQKELAPLMQKISQDFNKVPTWLDCNKGMVPD FVALDPKKQPVWEITGTELTKANLHTADGISVRFPRVTKIRDDKDWTSATNLEELKHLYV TSKEKVDLSLLQKLADTADDDEPPTKKVKTSPKPKKSPSKPSNVSPKTSKIDSFFDKKPK IKKLKEETSPVTSKPQLSEVDKDSKKVPKVEKMSLDEVDSKEFLFELDDPLPDVFKDKRL GFYPDFISFDEEERYHFERHWIAYGGQVVKSIRSMDVDYVLHANKNIDFDEIKKLKKKVP AEARHVYKDWLMQSINDVKLCDTSKYPVYIKPPR NT seq 2805 nt NT seq  +upstreamnt  +downstreamnt atgggcgattctacgccgttttttgttgaccgtgctaaaggaggccgagcgtcgtgtaaa ggttgtaaatcaagctgtcctggtggagagttacggatagctaaactagtggccagtccg tatggcgatgggcaacacatgaaatcgtggcaccatgtagactgcttcatgaatgtgcta ctaaaacaacggcccgccaccaaacgagttgactctattgacgatatcggaaactgggaa aacataaccaaagatgatcaggaatttatcttgaagaagttgaatgaaatggagaaaacc tatgctgagaaaaatagtggaaaatacacggctaaagttttaaaaaatatctcaaatccg tcttcaaaaacaacctctgcaacaaaaaataatgatagcacagacagttctaaggattta tcaattgaagtaaaaacagacgacaataatttcgagacattctttaaactgacaaagaaa attgcacaagttgatgcttacacggacaaaactgcagttgtcaacaacttttttagaaat ggcactgacaatcaatcatttaaaggtgacctaacactatggtgtaagttattatgccca caagccacaaaaagagtctacaatttaaaaagtaaacagctggtgaagttattctcaaga atatttaactgtgatcatgatgatatgttgactcatttagaacaaggcgacgttgctgaa acaatacaacatttctttaaaaaatcaaaagctgttagccctgcagcagacagcacactt acaatacatcaagtagaagacttcttggctgaactttctaaattaaccagagaagatgaa caaacttatcattttaagaagatagtgaagaaatgcactacttttgacttgaaaatgcta atacgattaataaaaggggatttgagaatcaatgctggcttgaaacatatattagaaggg gttcaccctgatgcgtacagcctgttccaaacttcaagagacataaacatggttttagac agagttatgtctgaaagcaacactgtaaaacataaagacgctatacaaaaaagtttaaga gctcaactgtcccttatgacccctgtgttaccaatgttggctgaagcttgcaaatcaata gatatggcgatgaagaaatgtccaaatggaatgttctctgaaatcaagtatgatggtgag agggtacaggtgcataaacaaggaaaagtcttcaaatatttttctcgagcactcaaagtt gtaatggcacataaagttagccattttgaagagtatttaccgcaggccttcccaaaaggt aatgatatgatattggatgctgaagttcttatggttgatgtgaaaacagggaaaccgtta ccttttggtactttaggcatacataagcagtcaaagttcaaagatgcatcagtctgcctg tatatatttgactgtctatattataatggtgaagtcttaatggatatgccaatcaggaag agaagacagattctatatgacaatatggttgaagttcctaatcatgtcatgttctcagaa caaaagttgattgagaaaccagctgatttagctaaaatgattgctaaggtgctggagcta ggtcttgagggtttagtccttaaagatttggagtccacatatgagcctggcaagagacat tggttgaaagtgaaaaaggactatttgtttgatggtgcaatggcagatacagcggaccta gtggttctaggtgcatggtttggtactggaaagaagggcggtatgatgtcggtattccta atgggttgcctggatgtccgaaggaatatttgggtgacagtgaccaaagtccacacagga catgacgatagtacattgagtagactccagaaagaactggctccccttatgcagaagata tcgcaagacttcaacaaagttcctacttggttagattgcaataaaggcatggtacccgat tttgttgctttggacccaaagaaacaacctgtttgggaaattactggtacggaactgact aaagcgaatttacatactgctgatggtatatcagtaagatttccaagagtaactaaaata agggatgataaggactggacatcagcaacgaatctagaagaattgaaacatttgtacgtg acgtctaaagagaaagtggatttgtcactgttacagaagctagcagatacggctgatgat gatgaaccaccgacaaagaaagtcaaaacaagtcccaaaccaaagaaaagtccaagtaaa ccatcaaatgtcagtccaaaaacctctaaaatagacagtttctttgataagaaacctaaa ataaagaaactgaaagaggaaacatcgcctgtgacatctaaacctcaactttcggaagtt gacaaagatagcaaaaaggttccaaaagttgaaaagatgagtttagatgaagttgatagc aaagaatttctgttcgaactagatgatcctttaccagatgtcttcaaagataaaagatta gggttctatccagacttcataagctttgatgaggaagagagatatcattttgaaagacat tggatagcctatggtggtcaagtcgttaaatcaatacgttctatggatgtcgactacgtt ttacatgcgaataaaaatatagattttgatgaaatcaagaagttaaagaaaaaagttcct gctgaagcaagacacgtgtacaaagattggttgatgcagtctattaatgatgttaaatta tgtgatacctcgaagtatcctgtgtatataaaacctccacggtga

DBGET integrated database retrieval system