Trichoplusia ni (cabbage looper): 113496527
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Entry
113496527 CDS
T05757
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113496527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113496527
03009 Ribosome biogenesis [BR:
tnl03009
]
113496527
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113496527
Spliceosome [BR:
tnl03041
]
Complex A
U1 snRNP components
U1 related factors
113496527
Complex B
113496527
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113496527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
DUF6505
DUF371
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
113496527
NCBI-ProteinID:
XP_026731576
UniProt:
A0A7E5VTW0
LinkDB
All DBs
Position
1:complement(14128027..14135801)
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AA seq
829 aa
AA seq
DB search
MQYNGFHNQHPIFRPRPDRNEQFGKIPIFNGMDFGGPKNFGPRNMGNKPNFRPRNDFNGI
RNDFNNHKSENGGNQGDFGGPKDYNKIKQNYNNQNQIKKNEYDADKAAGGNMQFYGNGKN
DFGGPKQQGFPKNNFGPKNFNNQNGHNSQQQSFGPKKVFNPNNMQQAVDFNGKQRGKKTK
HPGDSLVKPMWDLTQLEPIQKDFYKPHANVEGRTDDDVQKFRVSKEITVSGNNVPRPNQI
FDEGNFPDHIMNTIKEQGWAEPTGIQAQGWPIALSGRDMVGIASTGSGKTVAYMLPAAVH
IVHQQRIQRGDGPIALILAPTRELAQQIQSVAQSYSAHGCIRNTCLFGGSPKGPQARDLE
RGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV
LMWSATWPKEIQALAEDFLNDYIKVNIGSLNLSANNNIKQIIEVCEEHEKETKLTNLLKE
ISQERDNKVIVFVETKKKVDDIARAVRRKGHNALAIHGDKSQIERDAVLTEFRNGATSIL
IATDVAARGLDVEDVKFVINFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTSSDARQARG
LLAVLRETGQTPPSKLNDMARSNNNNSGRNRWQQRKENNSGASSPRQQNNQWNNKMANPN
PEETQNTYQNCGGNQQAPRFSNQNQGNQGYRQNSYQKQVPFPSPNVFESMGSYQGGYNNG
YQNGYNNQNGYAQRPYNNMRNGAQQYRNNNAGNKNNGTGSSYGSPPPHFATPQHYPQMHP
HHQEMLGGKFYGGGVGGGGPCGYQAAVGVSGPYAHLPPGPLLYAAPVQQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacggattccacaaccagcatccgattttcagacctcgaccagaccggaat
gaacaattcggtaaaatacctattttcaatggtatggactttgggggccctaaaaatttc
ggaccaagaaacatgggcaacaaacccaactttcggcccagaaatgattttaatggaata
agaaatgatttcaacaaccacaaatctgagaatggtggaaatcaaggtgattttggtgga
ccgaaagattacaacaaaattaaacagaattacaacaaccaaaaccaaattaagaagaat
gagtatgatgctgacaaagctgctggaggtaatatgcagttttatggcaatggcaaaaat
gactttggtggtccaaaacaacaaggattccctaaaaataactttggtccgaaaaacttc
aacaatcagaatggacacaacagtcagcaacaaagctttgggcctaagaaggtgttcaat
cctaataatatgcaacaggcagttgatttcaatggtaaacaaagaggcaagaagactaaa
caccctggagacagtttagtgaaacctatgtgggacttaacacagcttgagcctattcaa
aaagatttctacaagccgcatgctaatgtagaaggacgcacagatgatgacgtgcagaag
ttccgcgtgtcgaaagaaatcactgttagtggcaataatgttcctcgaccaaatcaaatc
tttgatgaagggaatttccctgatcatataatgaacaccattaaggagcaaggatgggct
gagcctacaggcattcaagctcaaggatggccaattgctctgtctggacgtgatatggtg
ggcattgcttcgacaggatctggtaaaacagtggcatacatgttgcctgctgcagtgcac
attgtacatcaacagcgtatacagcgtggagatggtcccattgcattaattttagctccc
acccgagaattagcccagcaaattcagtctgttgctcagagttacagtgctcatggctgt
attcgaaacacatgtctttttggtggctcccctaaaggaccacaagcaagagacctcgag
agaggtgttgaaattgtcattgccactcctggacgattgattgatttcttagaacgtggc
acaaccaacttgcgacgatgcacttatttggtccttgatgaagctgatagaatgttagat
atgggatttgaacctcaaattcggaagattattgagcaaatccgcccagatcgtcaagtg
ctgatgtggtctgctacatggccgaaagaaattcaagcccttgctgaagattttctaaat
gattacattaaagttaacattggatcactaaatctgtctgctaacaataatattaaacaa
ataattgaagtttgcgaagaacatgaaaaggaaactaagttgactaacttactcaaagag
atttcacaggaaagagacaacaaagtcattgtttttgtagagacaaagaagaaggtggat
gatatagctcgagctgttcgccgtaagggtcataatgctcttgccatacatggcgacaag
tcgcaaattgaacgcgatgctgtgttaacagaattcagaaacggagccactagcattctc
atcgccacagacgtagcagcacgaggccttgatgttgaggatgtcaagtttgttattaac
tttgattacccgaattcttcagaagattatattcatagaattgggcgtactggacgttgc
cagcaatctgggacagcttatacctactttacatccagtgatgcgcgtcaggctcgcgga
ttactcgctgttcttcgtgaaactggccagaccccgccttccaaactgaatgacatggct
cgcagtaacaacaataattctggtcgtaaccgttggcagcaacgtaaagaaaataacagt
ggagctagttcaccacgccagcaaaacaatcagtggaataataagatggccaatcctaac
cctgaagaaacacaaaatacctaccaaaattgtggtggcaatcaacaagcacctcgtttc
tctaaccaaaaccaaggaaaccagggatacagacaaaacagttatcaaaagcaagtaccc
ttccccagccccaatgtatttgagtctatgggaagctaccaaggagggtacaacaatggt
tatcagaatggatataacaaccaaaatggatatgctcaacgcccatacaacaatatgcgc
aatggtgcacagcagtaccgcaataacaatgctggcaacaaaaacaatggaactgggtca
tcatatggatctccacctcctcactttgctacaccacagcattacccccagatgcatcct
catcatcaagagatgcttggtggcaagttctatggtggtggagttggcggtggaggacct
tgtggatatcaagctgcagtgggtgtaagcgggccttacgcacatttgcctcccggccct
ttgttgtacgcggctccagtgcaacaataa
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