Trichoplusia ni (cabbage looper): 113496719
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Entry
113496719 CDS
T05757
Name
(RefSeq) autophagy-related protein 16 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04136
Autophagy - other
tnl04140
Autophagy - animal
tnl04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
113496719
04140 Autophagy - animal
113496719
04136 Autophagy - other
113496719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113496719
03029 Mitochondrial biogenesis [BR:
tnl03029
]
113496719
Membrane trafficking [BR:
tnl04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
113496719
Others
Specific organelles associated proteins
Auto phagosome
113496719
Mitochondrial biogenesis [BR:
tnl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113496719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
ATG16
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
ASA1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_RFWD3
FKBP15
CCDC113_CCDC96_CC
FliM
NET2A
CCDC186_middle
FAM76
LRRFIP
HOOK
LURAP
CC_Bre1
HisKA_3
DUF6212
Plectin_PPL
DUF7310
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
113496719
NCBI-ProteinID:
XP_026731835
UniProt:
A0A7E5VU17
LinkDB
All DBs
Position
8:complement(6716380..6863054)
Genome browser
AA seq
573 aa
AA seq
DB search
MNYKIKMEGSGWRSNIVSQLQARNKCETVAFQDIISFQSRLFDNVNTLKNENLQLTLLNE
RIRFTGTDSVLSGTGTANNERIQALEQKILIQQEELTSMHRRRGENAQQIMSLNEKVHEL
EKQLQAKDIVISETTAVIASLRAEIQMYETNMAELQGLNQVLRDEHQALQIAFASIEEKL
RKAQDENRSLVERLIKYKAKDADKMNEENEHFLKSSNPTAFFINTFGRVSFGKKSDKVRK
ELEEAARESGSRSSGSGSSEDKILESMPFYATVLPNKVALRFDAHDGEVNAVKWSPTDRI
VATGGADRKVKLWDVTKSMVESRGTLVGSNAGVMSVDFDATGAYIVGASNDFASRVWTVA
DQRLRHTLTGHSGKVMAAKFLGEPTKVITGSHDRTLKIWDLRSKMCTETKFAGSSCNDLV
TSDGAGSTIISGHFDKRIRFWDIRTEMSANDIMLQGKVTSLDLSRDNNYLLACVRDDTIQ
LIDLRMNTIVRSFSHESFKVGCDWSRAAFGPGGRLLSVGAADGAAYVWNTHSGRLETILK
DHTSAVTAVSWHPQSGLLASVDRGKRAIIWGDL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaactataaaataaaaatggaaggtagtggttggagaagcaacattgttagccaattg
caggctagaaataaatgcgaaactgtggcttttcaggacataatatcttttcagagcaga
ctgtttgataatgtgaatacattaaagaatgaaaacctgcaattaacgttattgaatgaa
agaatacggtttacgggaacagatagcgtgttatcaggcaccggaactgccaacaatgaa
aggattcaggctttggaacaaaaaattcttatccaacaagaagaactcacatctatgcac
agacggagaggagagaatgctcaacagataatgagtctcaatgagaaagtgcatgagtta
gagaaacaattacaagcaaaagatatagtaatttcagaaacaactgctgtcatagcatcc
cttcgtgctgaaatacaaatgtatgaaacaaatatggctgaattgcaaggactcaatcaa
gttttaagagacgagcatcaggcattacaaattgcttttgcatcaatagaagagaaatta
aggaaagcacaggacgaaaatcggtcgttagtggagagacttataaagtacaaagctaaa
gatgcggataaaatgaatgaagaaaatgaacatttcctcaagtcaagcaaccctaccgcg
tttttcatcaacacgtttggtagagttagtttcggaaagaaaagtgataaggtgcggaaa
gaactggaggaggcggctagagaaagtggtagccggagtagtggctcaggcagctctgag
gacaagatactggagtcgatgcctttttacgcaactgttctacctaataaggttgcattg
agatttgatgctcatgatggcgaagtcaatgctgtgaaatggagtccgacggacagaatc
gtggcgacaggcggtgccgatagaaaagtcaaattgtgggatgttactaaaagtatggtc
gaaagcaggggtacattagtcggttctaacgctggcgtcatgtcagtagacttcgatgcg
acgggagcgtacatcgtaggagcttcgaatgacttcgcgagtcgcgtgtggacagtcgcc
gatcagagattaaggcacacgttgacgggtcacagtgggaaagtaatggctgctaaattc
ctcggggagccaaccaaagtcattacgggaagccacgaccgaacgctcaaaatatgggac
cttagaagtaaaatgtgtacagagacaaagtttgcgggatcatcgtgtaatgacctggtg
acgtcagacggggcgggctccacgatcatatcgggacactttgacaagaggatcagattt
tgggacatccgcacagaaatgtccgcgaatgacatcatgctgcaaggcaaagtcacgtcg
ctggatctcagtagagataacaattatctgctggcgtgcgtccgtgatgacacaatacag
ctaatagatctcaggatgaacacaatcgtccgttccttcagtcacgagtcgttcaaggtg
ggttgcgactggtcgcgcgcggcgttcggtccgggcgggcgcctgctctccgtcggcgcg
gcggacggcgcggcctacgtgtggaacacgcactccgggcgactggagaccatactcaaa
gatcatacgtcggcagtgacggcggtgtcctggcatcctcagtctggtttgctggcgtca
gtggaccgcggcaagcgcgccataatatggggagatttgtga
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