Trichoplusia ni (cabbage looper): 113496760
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Entry
113496760 CDS
T05757
Name
(RefSeq) uncharacterized protein LOC113496760
KO
K08739
DNA mismatch repair protein MLH3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113496760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113496760
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113496760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113496760
NCBI-ProteinID:
XP_026731883
UniProt:
A0A7E5VU72
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Position
8:5119747..5125373
Genome browser
AA seq
1387 aa
AA seq
DB search
MALKRLPNDVQSLLSASTQINNYKRAVEELVYNSLDAESTSIAIRINIQEGTLQVIDNGC
GITKVDFHELGQRYMTSKVANISSLQAAPKKYGYRGEFLANIITVSQTVKITSRHESAEE
TWAKTFYKGKEKKFSKMTTRPTNGTTVDIKGFLYNLHIQKSTINPIHDQQNIKTLLEQLS
LVHNHISISLRDDCKNEIIFKIHKKRDIYQTLMTLFDIKNTEVVELQVEKNEYKVKGFIG
KTDSDLDVHWIYLNRKCIHNSSKLHKMINDNFKKVLPIKDRRKVKYKKDDDENNLFKQNI
PFYFAFITCPYIDYEISYTPKQLVIEFKNCHPIKKLLEKLVKFYAGDMNLKEIKVPKIKP
NSFTKVDSKDDNKDTRNQVEMIMKKILGNNTKNIDVSQLQKGVKGKLIKRKKKLAQKIIP
ISKLLTEEQANIKTPDPRHIVLRTDNKKSQEDVQENSKAIKKPIFVADHIRTEKLNVKEN
RVLELKQNKTYLKPEHKTRQKKNVSNPKKDPDKQKRKHKISNIEKVKKIKQQNNKEYGQK
RLTETDLMYEKSKMVAQRAEEFLGRDKRVVDTRHGLNPSRKYMNIHYDKIFLVPKNGEMD
KRKVITYKPKLFQTTYDLLQTIVTSQREFLSSNRNITEEFYGENRHFDYRHKITSMFKHE
LPKRYPLSHTLKSNECINIQTSEQKKSSHITYSPNINELCDSFTNENCYNQSSRIPTYDP
VYSGNITNNENFDISYNHTKTIQCTSSDYLESKLTYESHNYYRNEFTEETETTRKSLPRK
QNIRFISKQSEENFTSVNIHRLKYKKQSESKITTNKKNHTKQIVSNSSFTIEYSDSNVNE
FNSVSKSDFAANGTYCIKHTSQNHKMDQGFGLTYPVSPSILQCNEIREPHQAINKSLVIQ
SDELFDKCSNNGNLEIATTAANKSEPDQNNLNIVFVSKSQYFDNDIEPLNVCETVMPGSD
SVENEFKLPFHENNHLNDTLYNNLEMIHDTNMNNENELSHTIANQDEVIENTENVSRHFS
SKGNIDPNMALQGTTIKSQMGDKENQSKYTAPDDVLIQGIEMSLGNEVGLQNCNMEDKNF
NLKNRPRFMPKGMSQIFENCRTKNACNYILDKDYYEDSIYNNFVHDVHVNTEIYEPKIQN
VEDLTTRDIHKFQNKVKKNNASLIFDEKSLRNAKVLDQVDCKFIATIVAEKCLETEEPTE
YLVLFDQHAVHERIRLENNLAEYIQQDTWKSTPLDNVSMKLSKDEILYLHNYKDKFNQLG
LQWTILNENEIMVNSIPKAILGKNPREVEKVIKAVKHLIVEEINAIKVQKGCLALYPKSI
MDLVFSEACRYAIKFGDHLSKNDCVQLIQSLSACKTPFQCAHGRPVMAVIMDIKSNKQEY
KVKPCFH
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaaaggttacctaacgatgttcaatctttattaagcgcttcaactcaaatt
aataattataaaagagcggtcgaagaattggtttacaattcgctagacgcagaatcaaca
tcaatagcgataaggataaacattcaagaaggcacattacaagtcattgacaatggatgt
ggcattacgaaagttgattttcacgaactcggacaaaggtacatgacaagcaaagtagct
aatatttcttccctacaagcagctcccaaaaagtacggatatcgtggtgagttcctagct
aatataataacagtttcacaaactgttaaaatcacatctcgacatgaaagtgcagaagaa
acatgggctaaaacattttataaaggaaaggagaaaaagttctcaaaaatgacaacgagg
cctacaaatgggacaacagttgatataaaaggctttctttacaatctacatattcaaaag
tctacaatcaatcctattcatgatcagcaaaatataaaaacgcttctagaacaactttct
ttagtgcacaatcacatatcgataagtttaagagatgactgtaaaaacgaaatcatattt
aaaatccataagaaaagagatatttatcaaactttgatgaccttgtttgatattaaaaat
actgaagtagtagaacttcaagtagagaagaatgagtataaagtaaaaggttttattgga
aaaacagatagtgatcttgatgtgcattggatttatttaaatagaaaatgtatacataat
agcagcaagttacataagatgattaatgacaatttcaaaaaagtattaccgataaaggat
cgccgaaaagtaaaatataagaaagatgacgacgaaaataacttatttaaacaaaatatt
ccattttattttgcgttcatcacgtgtccatacattgattatgaaatcagttatacacca
aagcaattagtgatagaatttaaaaactgtcacccaataaaaaaactgctagaaaagctt
gttaagttttacgctggtgatatgaatttgaaggaaatcaaagtgcctaaaataaaacca
aactcttttacaaaggtagatagtaaagatgacaataaagacactagaaatcaagttgaa
atgatcatgaagaaaatattaggaaataatactaaaaatatagatgtctcacagttgcaa
aaaggcgtcaaaggtaaactgattaaaagaaaaaagaaacttgcccaaaaaataatacca
atttcgaagttgctaactgaagaacaagcaaatataaaaacaccggatcctagacatatt
gttttaagaactgataacaaaaagtcccaagaagatgtacaggaaaattcaaaggcaatc
aaaaaacccatttttgttgctgatcacattcgaacggaaaagttgaatgtaaaagaaaat
agagttttggaactcaaacagaataaaacttacttgaaacctgaacataaaactcgacaa
aagaaaaacgtttctaatcccaaaaaggatccagataaacaaaaacgcaaacataaaatc
tcaaatatagaaaaagtaaagaaaataaagcagcaaaataataaagagtatggccaaaaa
aggctaacagaaactgatttaatgtatgaaaaaagcaaaatggtcgcacaaagagctgaa
gaattcttaggacgtgataaaagagttgttgacacaagacacggactaaatccttcaagg
aaatacatgaatatccactacgataaaatatttttggttcctaaaaacggtgagatggac
aaacgcaaagtaatcacatacaaaccgaaactttttcaaactacttatgatctcttacaa
acgatcgtaacaagccaaagagagtttttaagtagtaatcggaatattacagaagagttt
tatggtgaaaatcgtcattttgattataggcataagattacatcgatgtttaagcatgaa
ctcccaaagagatatccattatctcacacattaaaatccaacgaatgtatcaatattcag
acgagtgaacaaaaaaaatcatctcatattacgtacagcccaaacatcaatgaattatgt
gatagttttaccaatgaaaattgttataatcagtcctcaagaattccaacatatgaccct
gtatattcaggcaacattactaacaatgaaaattttgatatcagttacaaccataccaaa
accatacaatgtacttcaagtgattatttagaaagtaaactgacatacgaaagtcacaat
tactatagaaacgaatttaccgaggaaactgaaacgacgagaaagtctctaccgcgaaaa
caaaatattcgattcatatcaaaacaatctgaagaaaattttacttcggttaatattcac
aggctcaagtataaaaaacaatctgagtccaaaattacaactaataaaaagaatcacaca
aaacaaattgtgagtaactcttcttttacgatcgaatattctgacagtaatgtgaatgaa
tttaattcagtttccaaaagtgattttgccgctaatggaacatattgtattaaacacact
tctcaaaatcataaaatggatcaaggatttgggttaacttacccagtatcgccctctatt
ctgcaatgtaatgaaataagagagccacatcaagcaatcaataaaagtttagtcattcaa
tcagatgagctctttgacaagtgctcaaataacggaaatttggaaattgccactacggcg
gcaaacaagagtgaacctgaccaaaacaatttaaacattgtattcgtttctaaatcacag
tattttgataatgatatagaaccattgaacgtgtgtgaaacagtcatgcctggaagtgat
tcagtagaaaatgaatttaaattaccgtttcatgaaaataatcatctgaatgacaccctt
tataataatctggaaatgattcacgacactaatatgaataacgaaaacgaactaagccat
acaattgcaaatcaggatgaggtaattgaaaatactgagaatgtttcccgtcacttttca
agtaaaggtaatatagacccaaatatggccttacaaggtactacgattaagtcacaaatg
ggtgataaagaaaatcagagtaaatatactgcacccgatgatgtactaatccaaggcata
gaaatgagtttgggtaatgaagttggactgcagaattgtaatatggaagacaagaatttt
aatttgaaaaataggccccggttcatgcccaaaggtatgtctcaaatatttgaaaattgc
cgcaccaaaaatgcttgtaattatattctggacaaggattactacgaagatagtatttat
aacaattttgtacatgatgttcatgtaaacactgaaatatatgaaccaaagatacagaat
gttgaagatcttacgactagagatattcataagtttcaaaataaagttaaaaagaataat
gcatccttaatttttgatgaaaagtctttgagaaacgccaaggttcttgatcaagttgat
tgtaaattcattgccacaatcgtagcagaaaaatgtttggaaactgaagagccaactgaa
tatttagtgctctttgatcaacatgctgtacacgaaaggatacgactagaaaacaattta
gcagaatacatacaacaagacacatggaaaagtactcctcttgataacgtctcaatgaaa
ctatcaaaagatgaaatcctttacttacacaactataaggacaagtttaatcaacttggt
ctacaatggacaatattaaatgaaaatgaaattatggtcaattctatacctaaagcaatt
cttgggaaaaacccgcgggaggttgagaaagtgataaaagcagtgaaacatttaatcgtt
gaagaaatcaatgcgataaaagtgcaaaaaggttgtttagctttatatccaaaatctata
atggatttggttttcagtgaggcttgtagatacgccataaaattcggagaccatctttcg
aagaacgattgcgttcagctgatacagtctttgtctgcctgtaagacaccgtttcaatgt
gctcatggcagacctgtgatggcagttataatggatattaaaagcaataaacaagaatat
aaggtaaaaccctgttttcattaa
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