Trichoplusia ni (cabbage looper): 113496852
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Entry
113496852 CDS
T05757
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03430
Mismatch repair
tnl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113496852
03460 Fanconi anemia pathway
113496852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113496852
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113496852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113496852
NCBI-ProteinID:
XP_026732022
UniProt:
A0A7E5VUT7
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Position
1:complement(14451752..14456213)
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AA seq
867 aa
AA seq
DB search
MNDKTVCNNIKPIASDTVHKICSGQVVVSLAVAVKELVENSLDAGATTIDIRFKNHGIDL
IEVSDNGSGVTEDNFAALTLKYHTSKLNDYSDLLGVESFGFRGEALSSLCSLANLTITTR
HKNAEYATKIEYDCKGNITKQTPCSRQVGTTVTLTNLFSSLPVRQKEFHKNAKREFVKMT
QLLYAYCLISVGVKITCSNQTSSNSKSVVVATQGSTSYKDNIASVFGVKQLQTILEINPE
YVTNIKDNIFKGLSGEVSQTDESIDIEDVEIDLSEDSNEADNNSVIECSQKSQGHKNVSK
PIEFTGYISSCAHGSGRSSSDRQYFFINSRPCEPTKIIKIINEIYRQYNPNQYPFVFLNV
NMERSSVDVNVTPDKRKIFLTKEKIILDILKNSILKLFESIPRTLRVDSSLTVSKGESND
LKPEMNQPRVFNSFLQQFQNKNRQNCHNESSIDNDSTKVELKRKSTTMLDFISSKIKKPV
IEESKFEDYIVKEEEQDTEQTLKNTDDEQDLSDNIDKEPLLDSCKTEFKCDTSDQTSCDD
STKDESNILYLDCTDNMPMTQIRKVSDVIIEKSHTIYCKTKDPKCKGNGTNDSNRNVHKK
CKIVTDKEDFGKNNRKSVTLKTSLDQVTNLAEIYNKNKSESKPTRVKFKSEINPVFNKKC
EEELSKEISKDSFKEMNVIGQFNLGFIITQLEDDLFIIDQHATDEIYNFETLQRTTELTS
QKLVIPQQLELSGVNEQILMDNLDVFKKNGFTFEINEEELPTKRVKLLTIPMSKNWIFGK
EDIEELLFMLRESPSEYCRPSRVRAMFASRACRKSVMIGTSLSKADMKKLVDHMAEIDKP
WNCPHGRPTIRHLVNLAMVHTKEKIDL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaaactgtttgtaataatattaagcctattgcttcagacactgtacataag
atatgctctggacaggtggtcgtaagtttagctgtagctgtaaaagagttggtggaaaac
tctttggatgcaggtgcaactaccattgatataagatttaaaaatcatggcattgattta
attgaggtatctgacaatggctccggagtaacagaagacaactttgcagcactaactttg
aagtatcatacttctaaattaaatgactactcagatttactgggagttgaaagctttggc
tttagaggtgaagcactaagttcactttgctccttagccaacctaacaattaccacaaga
cataaaaatgcagaatatgcaactaaaatagaatatgactgcaaagggaatataactaaa
cagacaccatgttccagacaagttggaacaacagtcaccttgacaaatctattctcatca
ttgcctgtaagacaaaaggaatttcataaaaatgctaaacgagaatttgtcaaaatgact
cagttactgtatgcatattgtttgatctctgttggagtgaaaattacatgtagtaaccaa
accagctccaactctaagtctgtggtagttgcaacacaaggatcaacatcctataaggac
aatatagcaagtgtatttggagttaagcaacttcagacaatactagaaattaacccagaa
tatgttacaaatattaaggataatatttttaagggtctgtcaggtgaagtttcacaaaca
gatgaaagtattgatatagaagatgttgaaatagatttatctgaagattccaatgaagca
gataataacagtgttatagaatgttcacaaaaatcacaaggtcataaaaatgtctcaaaa
ccaattgaattcactggttacatttcatcatgtgctcatggtagtggtcgatccagctct
gatcgacaatacttcttcattaatagtagaccttgtgagccaacaaagataattaaaata
ataaacgaaatatataggcaatataacccaaatcaatatccatttgtcttcttaaatgtt
aatatggaaagatcctctgtggatgtcaatgttactcctgataagcgaaaaatattccta
acgaaagagaaaataatattagacatactgaaaaattcaatacttaaattattcgaaagt
atacctagaacattaagggtagactcatcacttactgtaagcaaaggagaatcaaatgat
ttgaaaccagaaatgaatcaaccaagagtttttaattcttttttgcaacaatttcaaaac
aagaatcggcaaaattgtcataacgaatcttctatagataatgattcaaccaaagtggaa
ctaaaacgaaaatctaccacaatgctggacttcatctcctcaaaaattaaaaagccggtt
attgaagaatctaagtttgaagattatattgtaaaagaagaagaacaggacacagaacaa
actttgaaaaatacagatgatgaacaagatttaagtgataatattgacaaagaaccttta
ttagactcatgtaaaaccgaatttaaatgcgatacaagtgatcagacgtcttgcgatgat
tctacaaaagacgaaagtaatattttgtatttagattgcactgacaatatgcctatgacg
caaataagaaaagtttcagatgttatcatagaaaaatcgcacacaatatactgtaaaaca
aaagatcctaaatgtaaagggaatggcactaatgactccaatagaaatgtacataaaaag
tgcaaaattgtgactgacaaagaagattttggaaaaaataacagaaaatctgtaaccctt
aaaacttctttggaccaggtcacaaatttggctgaaatatataacaaaaataaatcagag
tccaaaccaactagagttaaattcaagagtgaaataaatcctgtatttaataagaagtgt
gaagaggaactaagtaaagaaatatctaaagactctttcaaggaaatgaatgtcataggg
cagtttaatttaggtttcataattactcaactagaagacgatcttttcattatagatcaa
catgctaccgatgaaatttacaattttgaaacattacaaaggactacagaactaacaagt
caaaaattagtcatacctcagcaacttgagctctcaggagttaatgaacaaatcttaatg
gataatttagacgtgtttaaaaagaatggattcacatttgaaatcaacgaagaagagtta
ccaacaaaaagggtaaaattactaacaatacctatgtcgaaaaactggatttttggaaaa
gaagatatcgaagagcttttatttatgttaagagaatcaccttcagaatactgcaggcca
agtagagtacgagctatgttcgcatctagagcatgtcgaaaatctgtaatgataggcaca
tccctaagcaaagctgatatgaaaaaactcgttgatcatatggctgaaatagataaacct
tggaattgtccccatggtagacctacaattcgtcatctcgttaatttagctatggtccac
accaaagagaaaattgatttgtga
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