Trichoplusia ni (cabbage looper): 113496962
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Entry
113496962 CDS
T05757
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113496962
09123 Folding, sorting and degradation
03018 RNA degradation
113496962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113496962
03041 Spliceosome [BR:
tnl03041
]
113496962
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113496962
mRNA degradation factors
5'-3' decay
Lsm complex
113496962
Spliceosome [BR:
tnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113496962
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
113496962
NCBI-ProteinID:
XP_026732165
UniProt:
A0A7E5VUZ9
LinkDB
All DBs
Position
8:complement(4537350..4537782)
Genome browser
AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggactagaaaactatgtgaatcaaacagtgtcagtgataacttcagatggt
cggaattttattggaactttaaaaggttttgatcaaactataaatataatattggacgag
tctcacgagagagtgttttcttcgtcaactggtgtggcgcaggtggttctaggactgcat
ataatacgcggcgacaatgtagcgattgttggtcaaatagacgagtcgattgatagcaga
ctggaccttggaaacataaaagccgaaccgttgggatcgattgtacattaa
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